mRNA_L-elsbetiae_contig15551.3899.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Match: D7G6I9_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6I9_ECTSI) HSP 1 Score: 230 bits (587), Expect = 2.080e-67 Identity = 126/144 (87.50%), Postives = 131/144 (90.97%), Query Frame = 1 Query: 1 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGXXXXXXXXXXGNFEQEHLLREQNAIHSSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQARFPAINRVVEAIQKKKAKDRLIIAAVIAACILFSLWFKGWL 432 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRG G+FEQEHLLREQNAIH+SLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQ RFPAINRVVEAIQKKKAKDRLIIAAV+AACI F+ W+KGWL Sbjct: 85 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGGGDGT-----GDFEQEHLLREQNAIHNSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQNRFPAINRVVEAIQKKKAKDRLIIAAVMAACIFFTFWYKGWL 223
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Match: A0A6S9HNZ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HNZ6_HETAK) HSP 1 Score: 119 bits (299), Expect = 7.300e-27 Identity = 73/140 (52.14%), Postives = 97/140 (69.29%), Query Frame = 1 Query: 1 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGXXXXXXXXXXGNFEQEHLLREQNAIHSSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQARFPAINRVVEAIQKKKAKDRLIIAAVIAACILFSLWF 420 RYREILFD++TEFK TS A+QRKR++ ELF+S+R XXXXX EHLLRE+NAI +++++ V+GQA R+ LR Q ATL S TL+ + + P+I RVVEAIQKKK +D +I+ VIA I F+LW+ Sbjct: 93 RYREILFDYTTEFKNTSVAIQRKRESQELFRSARHGGXXXXXXAARDPA---MEHLLRERNAIGGAMRASNSVIGQAFATRDELRAQGATLQGTSGTLAGITSNLPSIGRVVEAIQKKKYRDNMIVGGVIALLICFTLWY 229
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Match: A0A7S1BGG8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGG8_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.160e-26 Identity = 67/140 (47.86%), Postives = 90/140 (64.29%), Query Frame = 1 Query: 1 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGXXXXXXXXXXGNFEQEHLLREQNAIHSSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQARFPAINRVVEAIQKKKAKDRLIIAAVIAACILFSLWF 420 RYREIL+D+ST+FKK L RKRD ELF++ G+ +HLLRE+ AI +SL SAT V+GQA E LR QR L S T++ + A P +NR+++AI+KKK KD LII+ VIAAC+LF++W+ Sbjct: 120 RYREILYDYSTDFKKIRGNLARKRDEAELFRTRSGT-------AKKEAGDEGMDHLLREKRAIGNSLLSATSVIGQAREIHGDLRTQRKMLHGVSGTVAGLTANVPGVNRLIDAIRKKKNKDNLIISGVIAACVLFTMWY 252
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Match: A0A6U1TG21_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1TG21_TRICV) HSP 1 Score: 112 bits (279), Expect = 7.010e-24 Identity = 66/146 (45.21%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 1 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGXXXXXXXXXXGNFEQ------EHLLREQNAIHSSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQARFPAINRVVEAIQKKKAKDRLIIAAVIAACILFSLWF 420 RYREILFD S +FKKTSAA+ R+R+ ELF+ S + GN E+ EHLLRE+NAI +S ++A VLGQA E R LR Q TL T++S+ P +N ++++I++++ +D I++AVIAACILF+LW+ Sbjct: 126 RYREILFDCSADFKKTSAAVARRREAMELFRGSDMN------------GNVEEGPDPATEHLLRERNAILNSTRAAESVLGQAEEIRTDLRSQGTTLRGVRGTMTSIAGNVPGLNGLIDSIRRRRNRDDQIVSAVIAACILFTLWY 259
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Match: W7TVL4_9STRA (Snare component n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVL4_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.390e-23 Identity = 57/140 (40.71%), Postives = 87/140 (62.14%), Query Frame = 1 Query: 1 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGXXXXXXXXXXGNFEQEHLLREQNAIHSSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQARFPAINRVVEAIQKKKAKDRLIIAAVIAACILFSLWF 420 RYREIL ++ +F+K+ LQRKR+T EL + + GN + + LLRE+NAIHSSL+ +L QA E ++ LR QR +L A+S L+ + P+I+RVV+AIQ+ K +D +II + A C+ F++W+ Sbjct: 19 RYREILDYYANDFQKSQTVLQRKRETAELLSTRAGGKPNTGTKNGADWGNPQMDQLLRERNAIHSSLRGVDSILSQAMETKDGLRAQRHSLTGANSGLAGLANNLPSISRVVDAIQRIKTRDNIIIGLLTACCLCFTIWY 158
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Match: A0A836CCE5_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE5_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.630e-23 Identity = 61/139 (43.88%), Postives = 87/139 (62.59%), Query Frame = 1 Query: 1 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGXXXXXXXXXXGNFEQEHLLREQNAIHSSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQARFPAINRVVEAIQKKKAKDRLIIAAVIAACILFSLW 417 RYR L D E+ + S+A+QR RD ELF+ +A R + + +HLLRE I SSL+ A+ VLGQA EARESLR QR TL ++TL ++ + FP I R+V+ I +++ +D +I+A V+A CI F+LW Sbjct: 97 RYRVNLIDSRAEYNRASSAIQRHRDANELFRGRQARR------HKAEGADADTDHLLRESQYIGSSLRGASNVLGQAHEARESLRQQRETLSRTNATLGALTSAFPGIGRIVDQIGRRRTRDNMIVATVLALCICFTLW 229
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Match: A0A4D9D8W2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W2_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.120e-22 Identity = 57/140 (40.71%), Postives = 88/140 (62.86%), Query Frame = 1 Query: 1 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGXXXXXXXXXXGNFEQEHLLREQNAIHSSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQARFPAINRVVEAIQKKKAKDRLIIAAVIAACILFSLWF 420 RYREIL ++ +F+K+ LQRKR+TTEL + + GN + + LLRE+NAIHSSL+ +L QA E ++ LR QR +L A++ L+ + P+I+RVV+AIQ+ K +D +II + A C+ F++W+ Sbjct: 113 RYREILDYYANDFQKSQTVLQRKRETTELLSTRAGGKPNTGTKNGADWGNPQMDQLLRERNAIHSSLRGVDSILSQAMETKDGLRAQRHSLTGANTGLAGLANNLPSISRVVDAIQRIKTRDNIIIGLLTACCLCFTIWY 252
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Match: A0A7S1XU31_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU31_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.900e-20 Identity = 50/140 (35.71%), Postives = 88/140 (62.86%), Query Frame = 1 Query: 1 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGXXXXXXXXXXGNFEQEHLLREQNAIHSSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQARFPAINRVVEAIQKKKAKDRLIIAAVIAACILFSLWF 420 RYREILFD+ +EF+K S+ + +K++ +L S RG HL EQN+I+SS+ +A L QA+ AR+SLR QR L A TL + ++FPA+N+++E+I++++ ++ +++ I++C+ F++W+ Sbjct: 93 RYREILFDYKSEFRKLSSTIAKKKERADLL--SGGGRGGGIGAGGDGGDGVGMRHLYAEQNSINSSMHTAGQTLDQASGARDSLRRQREMLSGAGGTLQDLASQFPAVNQIIESIRRRRTRENVVMGLAISSCVCFTIWY 230
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Match: A0A7S1D086_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D086_CYCTE) HSP 1 Score: 99.8 bits (247), Expect = 6.190e-20 Identity = 56/140 (40.00%), Postives = 89/140 (63.57%), Query Frame = 1 Query: 1 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGXXXXXXXXXXGNFEQEHLLREQNAIHSSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQARFPAINRVVEAIQKKKAKDRLIIAAVIAACILFSLWF 420 RYREILFD +++F+KTS +QRK+ ELF+ G + E LLRE+N I++SL +++ V+ QA+E L+ Q +L + TL + ++ P +NR++E I++KKA+D LI++ VIA CI+F+LW+ Sbjct: 95 RYREILFDLTSDFQKTSTQIQRKKQQFELFQ------GANMSGSGQDENDPAMEQLLRERNHINNSLTASSSVIAQASEIHSDLKSQGMSLRGVTGTLVKITSQVPGLNRLMENIRRKKARDDLIVSIVIALCIVFTLWY 228
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Match: A0A7S2CM06_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CM06_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 6.780e-20 Identity = 54/139 (38.85%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 1 RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGXXXXXXXXXXGNFEQEHLLREQNAIHSSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQARFPAINRVVEAIQKKKAKDRLIIAAVIAACILFSLW 417 RYREI FD+ +F +T+ A+ R R+ +LF+ ++ R HL RE+ AI+SSL+SA+ V+GQA E R +L QR TL A TL + + +P+I RV+ +IQ+++ +D +++ VI+ CI F+LW Sbjct: 98 RYREIYFDYKRDFDETACAILRTREQVQLFRGTQVQRNKGTERDDTG-----MNHLYREEEAINSSLRSASNVIGQADEVRGALWSQRNTLTLAGGTLGQLSSAYPSIGRVIVSIQQRRYRDNMVVGLVISVCICFTLW 231 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15551.3899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15551.3899.1 >prot_L-elsbetiae_contig15551.3899.1 ID=prot_L-elsbetiae_contig15551.3899.1|Name=mRNA_L-elsbetiae_contig15551.3899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp RYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGGGGGGGGGAAGNback to top mRNA from alignment at L-elsbetiae_contig15551:65..3980- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15551.3899.1 ID=mRNA_L-elsbetiae_contig15551.3899.1|Name=mRNA_L-elsbetiae_contig15551.3899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3916bp|location=Sequence derived from alignment at L-elsbetiae_contig15551:65..3980- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15551:65..3980- >mRNA_L-elsbetiae_contig15551.3899.1 ID=mRNA_L-elsbetiae_contig15551.3899.1|Name=mRNA_L-elsbetiae_contig15551.3899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=870bp|location=Sequence derived from alignment at L-elsbetiae_contig15551:65..3980- (Laminarionema elsbetiae ELsaHSoW15)back to top |