mRNA_L-elsbetiae_contig15538.3893.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Match: A0A6H5KGM2_9PHAE (Methionine aminopeptidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGM2_9PHAE) HSP 1 Score: 396 bits (1017), Expect = 1.600e-130 Identity = 184/210 (87.62%), Postives = 195/210 (92.86%), Query Frame = 1 Query: 1 DRSTPPXXXPFVDVYTSCCTSINEIVCHGIPDSTVLEDGMVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGVMALGHTFTIEPLICEGTDQNVMWPDLWTAATADGRRTAQFEHTFLMTEEGAVPLTAKLDTSPRQFWEE 630 +R P + SCCTSINEIVCHGIPDSTVLEDGM+VNVDVTVFYKGYHGDCSEMFLVG+VDQAGKDLVQATYDIF AAIAYC+PGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNG+MA+GHTFTIEPLICEGT QNVMWPD WTAATADG+RTAQFEHTFL+TEEGAVPLTAKLD+SPRQFWE+ Sbjct: 61 ERGAYPSPLNYFGFPKSCCTSINEIVCHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVQATYDIFNAAIAYCKPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGIMAVGHTFTIEPLICEGTGQNVMWPDKWTAATADGKRTAQFEHTFLLTEEGAVPLTAKLDSSPRQFWEK 270
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Match: D8LNA9_ECTSI (Methionine aminopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNA9_ECTSI) HSP 1 Score: 386 bits (992), Expect = 1.610e-124 Identity = 178/210 (84.76%), Postives = 193/210 (91.90%), Query Frame = 1 Query: 1 DRSTPPXXXPFVDVYTSCCTSINEIVCHGIPDSTVLEDGMVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGVMALGHTFTIEPLICEGTDQNVMWPDLWTAATADGRRTAQFEHTFLMTEEGAVPLTAKLDTSPRQFWEE 630 +R P + SCCTSINEIVCHGIPDSTVLEDGM+VNVDVTVFYKGYHGDCSEMFLVG+VDQAGKDLV+ATYDIF AA+AYC+PGRPYSGIGGVIQEMVD RG+STISNFCGHGIGKTFHANPYVLHHKNDVNNG+MA+GHTFTIEPLICEGT QN+MWPD WTAATADG+RTAQFEHT L+TEEGAVPLTAKLD+SPRQFWE+ Sbjct: 212 ERGAYPSPLNYFGFPKSCCTSINEIVCHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVKATYDIFNAAMAYCKPGRPYSGIGGVIQEMVDERGFSTISNFCGHGIGKTFHANPYVLHHKNDVNNGIMAVGHTFTIEPLICEGTGQNLMWPDKWTAATADGKRTAQFEHTLLLTEEGAVPLTAKLDSSPRQFWEK 421
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Match: D8LNA6_ECTSI (Methionine aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNA6_ECTSI) HSP 1 Score: 344 bits (882), Expect = 2.240e-108 Identity = 154/194 (79.38%), Postives = 176/194 (90.72%), Query Frame = 1 Query: 49 SCCTSINEIVCHGIPDSTVLEDGMVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGVMALGHTFTIEPLICEGTDQNVMWPDLWTAATADGRRTAQFEHTFLMTEEGAVPLTAKLDTSPRQFWEE 630 SCCTSINEI+CHGIPDSTVLEDGM+VNVDVTVFYKGYHGDCSEMFLVG+VDQAGKDLV+ TYDI++ AIAYC+PGR Y GIGGVI+ + A+GY+T+ NFCGHGIGK FH NP +LH+KN+ +NG+M GHTFTIEP+ICEGT ++VMWPD WTAATADGRRTAQFEHTFLMT +GAVPLT KLDTSPRQFWE+ Sbjct: 209 SCCTSINEIICHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVKDTYDIWQQAIAYCKPGRHYKGIGGVIENLCTAKGYTTVPNFCGHGIGKLFHTNPNILHYKNNESNGIMKEGHTFTIEPMICEGTAKSVMWPDKWTAATADGRRTAQFEHTFLMTADGAVPLTGKLDTSPRQFWEK 402
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Match: A0A835YRW9_9STRA (Methionine aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW9_9STRA) HSP 1 Score: 304 bits (779), Expect = 2.780e-94 Identity = 134/194 (69.07%), Postives = 159/194 (81.96%), Query Frame = 1 Query: 49 SCCTSINEIVCHGIPDSTVLEDGMVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGVMALGHTFTIEPLICEGTDQNVMWPDLWTAATADGRRTAQFEHTFLMTEEGAVPLTAKLDTSPRQFWEE 630 SCCTS+NEIVCHGIPDSTVL++G ++N+DVTVF GYHGDCSEMF VG+VD A K+L+Q TYD ++ A +C+PG+ Y IG VIQE V+ARGY+T+ NFCGHGIG FH NP +LH+KN+ NGVM +GHTFTIEP+ICEG NV+WPD WTAAT DG+RTAQFEHTFLM E G PLT KL TSPRQFWE+ Sbjct: 124 SCCTSLNEIVCHGIPDSTVLKEGDILNIDVTVFLNGYHGDCSEMFCVGEVDDAAKELLQVTYDAWQKAADFCKPGKHYKEIGAVIQEYVEARGYTTVKNFCGHGIGSVFHTNPTILHYKNNEPNGVMRVGHTFTIEPMICEGKPDNVVWPDKWTAATIDGKRTAQFEHTFLMNENGVEPLTGKLQTSPRQFWEK 317
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Match: A0A6V1URZ5_HETAK (Methionine aminopeptidase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1URZ5_HETAK) HSP 1 Score: 291 bits (745), Expect = 9.500e-89 Identity = 130/194 (67.01%), Postives = 157/194 (80.93%), Query Frame = 1 Query: 49 SCCTSINEIVCHGIPDSTVLEDGMVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGVMALGHTFTIEPLICEGTDQNVMWPDLWTAATADGRRTAQFEHTFLMTEEGAVPLTAKLDTSPRQFWEE 630 S CTS+NEI+CHGIPDSTVL+DG ++N+DVTV++ GYHGDCSEMF VG+ D A KDLVQ TYD ++ A +C+PGRPY IGG+I++ V RGY+T+ +FCGHGIGK FH NP VLH+KN+ G M GH FTIEP+ICEGT +NVMWPD WTAATADG+RTAQFEHTFL+T G LTAKL SP+QFWE+ Sbjct: 160 SVCTSLNEIICHGIPDSTVLKDGDILNIDVTVYHGGYHGDCSEMFCVGEPDAAAKDLVQVTYDAWQEAANFCKPGRPYKEIGGIIEDYVTKRGYTTVPDFCGHGIGKVFHCNPNVLHYKNNEPCGKMEPGHVFTIEPMICEGTARNVMWPDKWTAATADGKRTAQFEHTFLLTATGVEALTAKLPDSPKQFWEK 353
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Match: A0A7S2MMP3_9EUKA (Methionine aminopeptidase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MMP3_9EUKA) HSP 1 Score: 281 bits (718), Expect = 3.110e-84 Identity = 124/193 (64.25%), Postives = 153/193 (79.27%), Query Frame = 1 Query: 49 SCCTSINEIVCHGIPDSTVLEDGMVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGVMALGHTFTIEPLICEGTDQNVMWPDLWTAATADGRRTAQFEHTFLMTEEGAVPLTAKLDTSPRQFWE 627 SCCTS+NE++CHGIPDS+VL DG +VN+D+T +Y GYHGDCSE FLVG+VD AGK LV+ T+D ++AAI YCQPGRP++GIG VI++ + GYS++ FCGHGIGK FH NP +LH++N G M +GH FTIEP+ICEGT ++VMW D WTA T DGRRTAQFEHT L+T GA PLT +LDTS FWE Sbjct: 153 SCCTSVNEVICHGIPDSSVLRDGDIVNIDITCYYGGYHGDCSETFLVGEVDDAGKQLVKVTHDCWQAAIDYCQPGRPFNGIGAVIEDTIKPHGYSSVKEFCGHGIGKVFHTNPNILHYRNK-EPGEMQVGHVFTIEPMICEGTARHVMWNDGWTATTKDGRRTAQFEHTLLITPTGAEPLTGRLDTSNPFFWE 344
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Match: W7UC07_9STRA (Methionine aminopeptidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC07_9STRA) HSP 1 Score: 280 bits (717), Expect = 1.200e-83 Identity = 124/194 (63.92%), Postives = 153/194 (78.87%), Query Frame = 1 Query: 49 SCCTSINEIVCHGIPD-STVLEDGMVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGVMALGHTFTIEPLICEGTDQNVMWPDLWTAATADGRRTAQFEHTFLMTEEGAVPLTAKLDTSPRQFWE 627 SCCTS+NE+VCHGIPD ST L+DG +VNVDVTV+YKGYHGDCSE F VG+VD+AGK LV+ TYD ++ AI +C+PGRPY IG +I+E V G++T+ FCGHG+GK FH P +LH KN GVM GHTFTIEP+ICEGT+++++WPD WTA TADGRR+AQFEHT L+T G LT +L TSP+ FWE Sbjct: 233 SCCTSLNEVVCHGIPDVSTKLQDGDIVNVDVTVYYKGYHGDCSETFCVGNVDEAGKRLVKVTYDAWQKAIEFCKPGRPYKDIGAIIEEYVTKEGFTTVREFCGHGVGKVFHTTPNILHFKNSQPAGVMQPGHTFTIEPMICEGTNKHILWPDKWTATTADGRRSAQFEHTLLITPSGVEALTGRLPTSPKFFWE 426
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Match: A0A7S2FNH4_9STRA (Methionine aminopeptidase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FNH4_9STRA) HSP 1 Score: 273 bits (697), Expect = 6.580e-83 Identity = 122/198 (61.62%), Postives = 157/198 (79.29%), Query Frame = 1 Query: 49 SCCTSINEIVCHGIPDST-VLEDGMVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGVMALGHTFTIEPLICEGTDQNVMWPDLWTAATADGRRTAQFEHTFLMTEEGAVPLTAKLD-TSPRQFWEEKS 636 S CTS+NE++CHGIPD+T +LE+G +VN+DVT+++ GYHGDCSEMF VG+VDQAGK+L+Q TYD + A+ +C+PGRPY IGG+I++ V G+ST FCGHGIG FH P +LH++N NGVM GHTFTIEP+I EGTD+ + WPD WTA TADG R+AQFEHT LMTE+G VPLTAK++ +S QFWE+ + Sbjct: 59 SVCTSVNEVICHGIPDTTSLLEEGDMVNIDVTIYFNGYHGDCSEMFTVGEVDQAGKELLQVTYDSWVKAMDFCEPGRPYKDIGGIIEDYVSQFGFSTTRQFCGHGIGSIFHTTPNILHYRNKEPNGVMQPGHTFTIEPMINEGTDKVLFWPDKWTATTADGGRSAQFEHTLLMTEDGVVPLTAKVEGSSMEQFWEKST 256
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Match: A0A7S2BSQ1_9STRA (Methionine aminopeptidase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSQ1_9STRA) HSP 1 Score: 273 bits (697), Expect = 7.380e-82 Identity = 122/198 (61.62%), Postives = 157/198 (79.29%), Query Frame = 1 Query: 49 SCCTSINEIVCHGIPDST-VLEDGMVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGVMALGHTFTIEPLICEGTDQNVMWPDLWTAATADGRRTAQFEHTFLMTEEGAVPLTAKLD-TSPRQFWEEKS 636 S CTS+NE++CHGIPD+T +LE+G +VN+DVT+++ GYHGDCSEMF VG+VDQAGK+L+Q TYD + A+ +C+PGRPY IGG+I++ V G+ST FCGHGIG FH P +LH++N NGVM GHTFTIEP+I EGTD+ + WPD WTA TADG R+AQFEHT LMTE+G VPLTAK++ +S QFWE+ + Sbjct: 134 SVCTSVNEVICHGIPDTTSLLEEGDMVNIDVTIYFNGYHGDCSEMFTVGEVDQAGKELLQVTYDSWVKAMDFCEPGRPYKDIGGIIEDYVSQFGFSTTRQFCGHGIGSIFHTTPNILHYRNKEPNGVMQPGHTFTIEPMINEGTDKVLFWPDKWTATTADGGRSAQFEHTLLMTEDGVVPLTAKVEGSSMEQFWEKST 331
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Match: A0A7S0EDD9_9EUKA (Methionine aminopeptidase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EDD9_9EUKA) HSP 1 Score: 270 bits (690), Expect = 7.630e-81 Identity = 116/197 (58.88%), Postives = 154/197 (78.17%), Query Frame = 1 Query: 49 SCCTSINEIVCHGIPDSTVLEDGMVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQPGRPYSGIGGVIQEMVDARGYSTISNFCGHGIGKTFHANPYVLHHKNDVNNGVMALGHTFTIEPLICEGTDQNVMWPDLWTAATADGRRTAQFEHTFLMTEEGAVPLTAKLDTSPRQFWEEKSQ 639 SCCTS+NE++CHGIPDS+VL DG +VN+D+T +Y GYHGDCSE F+VG+VD+AGK LV+ T+D ++AAI YC+PG+PY+GIG +IQ+ + GY+++ FCGHGIG FH NP +LH+KN+ G M +GH FTIEP+ICEGT ++VMW D WTA T DG R+AQFEHT L+ + G LTA+L TSP +WE + + Sbjct: 140 SCCTSVNEVICHGIPDSSVLRDGDIVNIDITCYYGGYHGDCSETFMVGEVDEAGKKLVRVTHDCWQAAIDYCKPGQPYNGIGKIIQDYIQPHGYTSVKEFCGHGIGTIFHTNPNILHYKNN-EPGTMEVGHVFTIEPMICEGTSKHVMWGDDWTATTRDGGRSAQFEHTLLVNDTGVEVLTARLPTSPPLWWEAEGK 335 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15538.3893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15538.3893.1 >prot_L-elsbetiae_contig15538.3893.1 ID=prot_L-elsbetiae_contig15538.3893.1|Name=mRNA_L-elsbetiae_contig15538.3893.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp MVVNVDVTVFYKGYHGDCSEMFLVGDVDQAGKDLVQATYDIFKAAIAYCQback to top mRNA from alignment at L-elsbetiae_contig15538:470..3960- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15538.3893.1 ID=mRNA_L-elsbetiae_contig15538.3893.1|Name=mRNA_L-elsbetiae_contig15538.3893.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3491bp|location=Sequence derived from alignment at L-elsbetiae_contig15538:470..3960- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15538:470..3960- >mRNA_L-elsbetiae_contig15538.3893.1 ID=mRNA_L-elsbetiae_contig15538.3893.1|Name=mRNA_L-elsbetiae_contig15538.3893.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1050bp|location=Sequence derived from alignment at L-elsbetiae_contig15538:470..3960- (Laminarionema elsbetiae ELsaHSoW15)back to top |