mRNA_L-elsbetiae_contig15536.3892.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A6H5KD88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD88_9PHAE) HSP 1 Score: 208 bits (530), Expect = 2.920e-63 Identity = 137/151 (90.73%), Postives = 142/151 (94.04%), Query Frame = 1 Query: 1 MFGALTFVLARECRSVVTGRMAGALFAGTTCXXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKAKVDVEAVAEILAEEQAREARARAASGIYVSM 453 MFG LT LARECRSVVTGRMAGALFAGTTCXXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGE VVAGNIIIRQRGTQFYPG GVGMGKDHTLFA +PGFVVF+R+ F+KRRTVSVMKAKVD EAVA +LAEEQAREARARAASGIYVSM Sbjct: 1 MFGVLTSALARECRSVVTGRMAGALFAGTTCXXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMHPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM 151
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: D7FJF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF8_ECTSI) HSP 1 Score: 212 bits (539), Expect = 3.060e-63 Identity = 138/151 (91.39%), Postives = 142/151 (94.04%), Query Frame = 1 Query: 1 MFGALTFVLARECRSVVTGRMAGALFAGTTCXXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKAKVDVEAVAEILAEEQAREARARAASGIYVSM 453 MFG LT VLARECRSVVTGRMAGALFAGTTC XXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGE VVAGNIIIRQRGTQFYPG GVGMGKDHTLFA YPGFVVF+R+ F+KRRTVSVMKAKVD EAVA +LAEEQAREARARAASGIYVSM Sbjct: 99 MFGVLTSVLARECRSVVTGRMAGALFAGTTCVXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM 249
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A6G0XKB3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKB3_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.010e-17 Identity = 46/62 (74.19%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 166 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSV 351 LGVKKFGGE VVAGNIIIRQRGT++YP GVGMGKDHTLFA GFV F N KR+ VSV Sbjct: 43 LGVKKFGGEAVVAGNIIIRQRGTKYYPSKGVGMGKDHTLFATRDGFVRFWWNVPKKRQEVSV 104
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: D8M2M0_BLAHO (Ribosomal protein L27 n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M2M0_BLAHO) HSP 1 Score: 88.2 bits (217), Expect = 1.060e-17 Identity = 39/62 (62.90%), Postives = 52/62 (83.87%), Query Frame = 1 Query: 166 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSV 351 LG+KKFGGEKV+ GNII+RQRGT+F+PG GVGMG+DHTL+A G+V F N F+K++T+ + Sbjct: 33 LGLKKFGGEKVIPGNIIMRQRGTKFHPGQGVGMGRDHTLYALTEGYVHFTWNPFNKKQTIDI 94
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A0C5J8G7_9RHOO (50S ribosomal protein L27 n=2 Tax=Rugosibacter TaxID=1914449 RepID=A0A0C5J8G7_9RHOO) HSP 1 Score: 87.0 bits (214), Expect = 1.250e-17 Identity = 40/67 (59.70%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 166 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKAKV 366 LGVK++GG+ + AGNII+RQRGT+F+PG VGMGKDHTLFA+ G V+F KRRT+S++ A V Sbjct: 21 LGVKRYGGQLISAGNIIVRQRGTEFHPGDNVGMGKDHTLFAKVEGTVLFAVKGLKKRRTISIIPAAV 87
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A8I1RRQ9_9PROT (50S ribosomal protein L27 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1RRQ9_9PROT) HSP 1 Score: 86.7 bits (213), Expect = 2.050e-17 Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 166 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKAKVDVEAVAE 387 LGVKKFGGE + AGN+I+RQRGT+FYPG GVGMGKDHTLFA G V F + F +R VSV+ + AE Sbjct: 21 LGVKKFGGEAIAAGNVIVRQRGTKFYPGEGVGMGKDHTLFATRDGQVAF-KTGFKRRTFVSVLADAIPAATAAE 93
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A6N7R167_9GAMM (50S ribosomal protein L27 n=1 Tax=Spiribacter sp. C176 TaxID=2664894 RepID=A0A6N7R167_9GAMM) HSP 1 Score: 86.3 bits (212), Expect = 2.330e-17 Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 166 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKA 360 LGVK+FGG+ V+AGNIIIRQRGT F+PG VGMG DHTLFA+ G VVF R + RR VS+ A Sbjct: 21 LGVKRFGGQSVIAGNIIIRQRGTHFHPGENVGMGTDHTLFAKIDGQVVFRRKGPNNRRYVSIQPA 85
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A5C7VLD7_9PROT (50S ribosomal protein L27 n=1 Tax=Nitrosomonas sp. TaxID=42353 RepID=A0A5C7VLD7_9PROT) HSP 1 Score: 85.9 bits (211), Expect = 3.130e-17 Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 1 Query: 166 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVM 354 LGVK++GGE + AGNII+RQRGTQF+PG VGMGKDHTLFA+ G V+F+ + RRTVS++ Sbjct: 21 LGVKRYGGELIKAGNIIVRQRGTQFHPGDNVGMGKDHTLFAKIEGKVLFSMKSSFNRRTVSIV 83
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A0S2FPC2_9GAMM (50S ribosomal protein L27 n=12 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0S2FPC2_9GAMM) HSP 1 Score: 85.9 bits (211), Expect = 3.220e-17 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 1 Query: 166 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVMKAK 363 LGVK +GG+ + AGNII+RQRGTQF+PG+GVG+G+DHTLFA G V F+ KRRTVSV+ A+ Sbjct: 21 LGVKIYGGQSIEAGNIIVRQRGTQFHPGAGVGLGRDHTLFALVDGKVEFSTKGLKKRRTVSVVVAE 86
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Match: A0A6L7XWV0_9GAMM (50S ribosomal protein L27 n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7XWV0_9GAMM) HSP 1 Score: 85.9 bits (211), Expect = 3.220e-17 Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 1 Query: 166 LGVKKFGGEKVVAGNIIIRQRGTQFYPGSGVGMGKDHTLFARYPGFVVFNRNAFSKRRTVSVM 354 LG+KKFGGE V+AGNII+RQRGT+F+PG+ VG G+DHTLFA GFV + R +RRTVSV+ Sbjct: 21 LGLKKFGGEAVLAGNIIVRQRGTRFHPGANVGCGRDHTLFATADGFVKYERLGGQQRRTVSVL 83 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15536.3892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15536.3892.1 >prot_L-elsbetiae_contig15536.3892.1 ID=prot_L-elsbetiae_contig15536.3892.1|Name=mRNA_L-elsbetiae_contig15536.3892.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp MFGALTFVLARECRSVVTGRMAGALFAGTTCVATRCASKAAGGNTTNGRNback to top mRNA from alignment at L-elsbetiae_contig15536:1576..3912- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15536.3892.1 ID=mRNA_L-elsbetiae_contig15536.3892.1|Name=mRNA_L-elsbetiae_contig15536.3892.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2337bp|location=Sequence derived from alignment at L-elsbetiae_contig15536:1576..3912- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15536:1576..3912- >mRNA_L-elsbetiae_contig15536.3892.1 ID=mRNA_L-elsbetiae_contig15536.3892.1|Name=mRNA_L-elsbetiae_contig15536.3892.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=912bp|location=Sequence derived from alignment at L-elsbetiae_contig15536:1576..3912- (Laminarionema elsbetiae ELsaHSoW15)back to top |