prot_L-elsbetiae_contig1553.3889.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1553.3889.1
Unique Nameprot_L-elsbetiae_contig1553.3889.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1168
Homology
BLAST of mRNA_L-elsbetiae_contig1553.3889.1 vs. uniprot
Match: A0A6H5JJD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJD0_9PHAE)

HSP 1 Score: 1124 bits (2907), Expect = 0.000e+0
Identity = 750/1208 (62.09%), Postives = 806/1208 (66.72%), Query Frame = 0
Query:   37 AGLEPGMLSPLAQLTVINGLVERDDLYYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMMDLSGNGTCGVDLISRPSYSRDGVWHFAVVGGSPLHGDRYFAGPPDTLAFEAAVIAESAVYPTLDLGVAAPGACLRKVAIPPVVVPTITGLPGSSSSRHNGG-GKSWRGDFLPTLGRFPAGGAKDRAQP---GNGDPEQKEEDENEKLRPSAAAAAL--TPSWLGAFTVSAYDEVVAVPFEVAALVDGEEAXXXXXXXXXXXXXXXXXXXXXXXXQRRALGEGGGKAGLPARTGEG------------------WLDRRSKDRRRRRALGGLTRGVAGLD---GR---DQEG-GVAGEXXXXXXXXXXXXXXXXXXXXXXXCEVTVCAXXXXXXXGREXXXXXXXXXXQGGDGD-----------GRQSVCRSVVVKRKGAAVSGVLELPDRPQTGRWYLTARAACDDDTGTAGRXXXXXXXXXXXXXTLGAAGSPEKGEEEDEDGAKEEGQGRVGGRRVGASLTGAGQ-------------------GQEQEKKNIYSGSGWGLEVMSLQRDWAHVEWSADFLVPDVGGGASGADWGGE-------AEACLSSAGGAEAFVFRAAAVAEACPRGAVGVGGVDLAPVSSAKTGPAPGDGQEEAEAEALHRFSCVGAELPMLMRRDGATRVHEGQPQALSNFVRGEGGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGGAPRWLWRGPGPPSLWYALEMSGREVGASMEVRLSVNSSAPLAAAPQGWGGA---AGGSPTAWHMGSDVYPAVAGGDGXXXXXXXXXXXXXFPYPSLAVEAASSMNLSVAMRVGALPVIDPNGTARDGTVVLWTADALSEPGEASERPLPYGDDVGXXXXXAXXXXXXXXGAADADDLPPWWSTTFTWNLTHPPPLHPAAVGGGAGLGRGTAATTLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKGGEGREKGGLGGGGE--GELLWTLGVAPEVTFRYCDEDVCPVGRGECRAARGGSGDDYVTVSKCYCFYGYGGEACGQRVVSYVSMLWQFCLLVLSNLAVVPAVRLSLRLGAATGAAPAVVLGLNGAASAFYHMCDLELTCAWGMLSFHSLQALDFFFSFFSVAALVLHLCPMPWDEPLV---PRSTLSS 1168
            AGLEP MLSPLAQLT+I+  VERDD++YFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAM DL+GNGTCGVD+I+RPSYSRDGVWHFAVVGGSPL GDRYFAGPPDTLAF+AAVIA+SAVYPTLD GVAA G CLRKVA+PPVVVPTITG PGSS SR  GG G+  RG FLPTLGRFPAGGA ++ +    G GD E+      E  R +AAA AL  +PSWLGAFT+SAYDE V +PFEVAA+VDG      XXXXXXXXXX             RALG  G        T  G                                   LT   AG     GR   DQ G G  GE                       CEVTVCA       G            Q  DGD           G+Q VCRSVVV  +GAAVSG L+LPDRPQTGRWYLTARAAC+   GTAG              T+GA         +DE                G   TG G                    GQE E+KNIYSG+GWGLEVMSLQRDWAHVEWSADFLVPD G G   A  GG+        EAC S+AGG +AFVFRAAA  EACPRGAVGVGGVDL PV++A      GDG   A  E+ HRFSCVGAELPMLMRRDGA R+HEGQP+ALSNFVR EGGAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           AP WLW+GPGPPSLWYALEMSGREVGASM++RLSVNSSAPL  A          A GSP+AWHMG   + + +GGD                  S+ VE ASSMNLSVAMRVGALPV+DPNGTAR+GTVVLWTADALSEPGEA++RP           XX XXXXXXXX      DLP WWSTTFTWNLTHPPPLHPAAVGGGAGLGRGTAATTLF                                    +  E   + G GGGG+  G  LWTLGVAPEVTFRYCDEDVCPVGRGECRAARGGSGDDYVTVSKCYCFYGYGGEACGQRVVSYVS+LWQFCLLVLSNLAVVPAVR++LRLG ATGAAPAVVLGLNGAASAFYHMCDLELTCA GMLSFHSLQALDFFFSFFSVAALVLHLCPMPWDEPLV   P S+L+S
Sbjct:   36 AGLEPSMLSPLAQLTLIDAQVERDDIHYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMPDLAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPPDTLAFQAAVIADSAVYPTLDRGVAASGDCLRKVAVPPVVVPTITGPPGSSVSRRGGGXGQGSRGSFLPTLGRFPAGGAAEKTEGKDRGGGDGEE------EDARHAAAATALLLSPSWLGAFTLSAYDESVTIPFEVAAIVDGGSEADGXXXXXXXXXXGTGQGLVG-----RALGANGTADVKLLTTDYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTERAAGYGQGKGRAAGDQSGAGDGGEEKEETHQGREEERSLDNDDGG--CEVTVCAAAARIVLG---------IGEQDDDGDAEVPQEDSSVGGQQRVCRSVVVGGQGAAVSGTLDLPDRPQTGRWYLTARAACEAAPGTAGHKQRSLRRS-----TVGADVPTTSAASQDE----------------GVPGTGGGVPSXXXXXXXXXXXXXXXXVGQEVEEKNIYSGTGWGLEVMSLQRDWAHVEWSADFLVPDGGDGGGDARRGGDDGKGEGGREACTSAAGGKDAFVFRAAAFTEACPRGAVGVGGVDLRPVTAAAEAGV-GDGAAAAARES-HRFSCVGAELPMLMRRDGAARIHEGQPRALSNFVRDEGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------APSWLWQGPGPPSLWYALEMSGREVGASMQIRLSVNSSAPLTTAAXXXXXXXXXAHGSPSAWHMGPR-FSSRSGGDAGGGDGGAPVVQ------SVPVEDASSMNLSVAMRVGALPVVDPNGTAREGTVVLWTADALSEPGEANDRPXXX--------XXXXXXXXXXXXXXXXXDLP-WWSTTFTWNLTHPPPLHPAAVGGGAGLGRGTAATTLFVVVSGETEAEASGRAKRYEGVGPPGGRDGMIRR---RAAEREVEQGEGGGGDEVGVSLWTLGVAPEVTFRYCDEDVCPVGRGECRAARGGSGDDYVTVSKCYCFYGYGGEACGQRVVSYVSLLWQFCLLVLSNLAVVPAVRVALRLGLATGAAPAVVLGLNGAASAFYHMCDLELTCAGGMLSFHSLQALDFFFSFFSVAALVLHLCPMPWDEPLVCSPPPSSLAS 1168          
BLAST of mRNA_L-elsbetiae_contig1553.3889.1 vs. uniprot
Match: D8LS70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS70_ECTSI)

HSP 1 Score: 712 bits (1837), Expect = 9.770e-234
Identity = 431/630 (68.41%), Postives = 455/630 (72.22%), Query Frame = 0
Query:  557 MSLQRDWAHVEWSADFLVPDVGGGASGADWGGE-------AEACLSSAGGAEAFVFRAAAVAEACPRGAVGVGGVDLAPVSSA-KTGPAPGDGQEEAEAEALHRFSCVGAELPMLMRRDGATRVHEGQPQALSNFVRGEGGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGGAPRWLWRGPGPPSLWYALEMSGREVGASMEVRLSVNSSAPL--AAAPQGWGGAAGGSPTAWHMGSDVY-PAV--AGGDGXXXXXXXXXXXXXFPYPSLAVEAASSMNLSVAMRVGALPVIDPNGTARDGTVVLWTADALSEPGEASERPLPYGDDVGXXXXXAXXXXXXXXGAADADDLPPWWSTTFTWNLTHPPPLHPAAVGGGAGLGRGTAATTLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKGGEGREKGGLGGGGE--GELLWTLGVAPEVTFRYCDEDVCPVGRGECRAARGGSGDDYVTVSKCYCFYGYGGEACGQRVVSYVSMLWQFCLLVLSNLAVVPAVRLSLRLGAATGAAPAVVLGLNGAASAFYHMCDLELTCAWGMLSFHSLQALDFFFSFFSVAALVLHLCPMPWDEPLV---PRSTLSS 1168
            MSLQRDWAHVEWSADFLVPDVG G   A  GG+        EAC S+AGG +AFVFRAAA  EACPRGAVGVGGVDL PV++A + G   G     A A   HRFSCVGAELPMLMRRDGA R+HEGQP+ALSNFVR EGGAAA         XXXXXXXXXXXXXXXXX                APRWLWRGPGPPSLWYALEMSGREVGASME+RLSVNSSAPL   A       +A GSP+AWHMG     P+V  AGG G                 S+ VE ASSMNLSVAMRVGALPV+DPNGTAR+GTVVLWTADALSEPGEAS+RP P  DD                 AA A DLP WWSTTFTWNLTHPPPLHPAAVGGGAGLGRGTAATTLF                                    +  E   + G GGGG+  G  LWTLGVAPEVTFRYCDEDVCP+GRGECRAARGGSGDDYVTVSKCYCFYGYGGEACGQRVVSYVS+LWQFCLLVLSNLAVVPAVR++LRLG ATGAAPAVVLGLNGAASAFYHMCDLELTCA GMLSFHSLQALDFFFSFFSVAALVLHLCPMPWDEPLV   P S L+S
Sbjct:    1 MSLQRDWAHVEWSADFLVPDVGDGGGDARRGGDDGKGEGGREACTSAAGGEDAFVFRAAAFTEACPRGAVGVGGVDLRPVTAAAEAGFGEGAAATAAAATESHRFSCVGAELPMLMRRDGAARIHEGQPRALSNFVRDEGGAAAAVAGLSESGXXXXXXXXXXXXXXXXXAKQ-------------APRWLWRGPGPPSLWYALEMSGREVGASMEIRLSVNSSAPLMTTATAAAASLSAHGSPSAWHMGPRFSSPSVGDAGGGGGGAPVVQ----------SVPVENASSMNLSVAMRVGALPVVDPNGTAREGTVVLWTADALSEPGEASDRPPPPYDDSSD--------------AAGAADLP-WWSTTFTWNLTHPPPLHPAAVGGGAGLGRGTAATTLFVVVSGETEAEASGRAKRYGGVGSTGGRDGKLRR---RAAEREVEEGEGGGGDEVGVSLWTLGVAPEVTFRYCDEDVCPIGRGECRAARGGSGDDYVTVSKCYCFYGYGGEACGQRVVSYVSLLWQFCLLVLSNLAVVPAVRVALRLGLATGAAPAVVLGLNGAASAFYHMCDLELTCAGGMLSFHSLQALDFFFSFFSVAALVLHLCPMPWDEPLVRSPPPSLLAS 589          
BLAST of mRNA_L-elsbetiae_contig1553.3889.1 vs. uniprot
Match: D8LS69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS69_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 6.280e-104
Identity = 177/227 (77.97%), Postives = 195/227 (85.90%), Query Frame = 0
Query:    5 EARARVGHLRVVVMMAFLLA-LVAVALADGTATAGLEPGMLSPLAQLTVINGLVERDDLYYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMMDLSGNGTCGVDLISRPSYSRDGVWHFAVVGGSPLHGDRYFAGPPDTLAFEAAVIAESAVYPTLDLGVAAPGACLRKVAIPPVVVPTITGLPGSSSSRH-NGGGKSWRGDFLPTLGRFPA 229
             +RAR   LR  ++ A L++ L+AV L      AGLEP MLSPLAQLT+I+  VERDD+YYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAM D++GNGTCGVD+I+RPSYSRDGVWHFAVVGGSPL GDRYFAGP DTLAF+AAVIA+SAVYPTLD GVAA G CLRKVA+PPVVVPTITG PGSS+SR   GGG+  RG FLPTLGRFPA
Sbjct:    3 SSRARRCRLRSALLRACLVSSLLAVELTLADEAAGLEPSMLSPLAQLTLIDAQVERDDMYYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMPDVAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPADTLAFQAAVIADSAVYPTLDRGVAASGDCLRKVAVPPVVVPTITGPPGSSASRRVGGGGQGSRGSFLPTLGRFPA 229          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1553.3889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JJD0_9PHAE0.000e+062.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS70_ECTSI9.770e-23468.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LS69_ECTSI6.280e-10477.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021910NGX6/PGAP6/MYMKPFAMPF12036DUF3522coord: 1067..1154
e-value: 4.9E-11
score: 43.3
IPR021910NGX6/PGAP6/MYMKPANTHERPTHR14319FIVE-SPAN TRANSMEMBRANE PROTEIN M83coord: 1025..1147
NoneNo IPR availablePANTHERPTHR14319:SF3TRANSMEMBRANE PROTEIN-LIKE PROTEINcoord: 1025..1147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..1066
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1135..1156
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1097..1115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1116..1134
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1157..1168
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1086..1096
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1067..1085
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.892
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 1046..1057
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 1046..1057

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1553contigL-elsbetiae_contig1553:8637..19712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1553.3889.1mRNA_L-elsbetiae_contig1553.3889.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1553 8610..19712 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1553.3889.1 ID=prot_L-elsbetiae_contig1553.3889.1|Name=mRNA_L-elsbetiae_contig1553.3889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1168bp
MGLLEARARVGHLRVVVMMAFLLALVAVALADGTATAGLEPGMLSPLAQL
TVINGLVERDDLYYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTP
SRHELLAHAMMDLSGNGTCGVDLISRPSYSRDGVWHFAVVGGSPLHGDRY
FAGPPDTLAFEAAVIAESAVYPTLDLGVAAPGACLRKVAIPPVVVPTITG
LPGSSSSRHNGGGKSWRGDFLPTLGRFPAGGAKDRAQPGNGDPEQKEEDE
NEKLRPSAAAAALTPSWLGAFTVSAYDEVVAVPFEVAALVDGEEAAATAG
GGRARRGGEDGGGSDDSVVQRRALGEGGGKAGLPARTGEGWLDRRSKDRR
RRRALGGLTRGVAGLDGRDQEGGVAGEEEDGEEEDEEEDEGRKLDTDDDG
CEVTVCAAAARILLGREGRGGGDDEPPQGGDGDGRQSVCRSVVVKRKGAA
VSGVLELPDRPQTGRWYLTARAACDDDTGTAGRARRLRRQQRQQQRTLGA
AGSPEKGEEEDEDGAKEEGQGRVGGRRVGASLTGAGQGQEQEKKNIYSGS
GWGLEVMSLQRDWAHVEWSADFLVPDVGGGASGADWGGEAEACLSSAGGA
EAFVFRAAAVAEACPRGAVGVGGVDLAPVSSAKTGPAPGDGQEEAEAEAL
HRFSCVGAELPMLMRRDGATRVHEGQPQALSNFVRGEGGAAAGAAASAAG
AVGGKAGAGKEGKGGGGKAAAAAAAAAAAGSDGGAPRWLWRGPGPPSLWY
ALEMSGREVGASMEVRLSVNSSAPLAAAPQGWGGAAGGSPTAWHMGSDVY
PAVAGGDGTGSGGGQGQKAASFPYPSLAVEAASSMNLSVAMRVGALPVID
PNGTARDGTVVLWTADALSEPGEASERPLPYGDDVGDDVGDAAAAAAATA
GAADADDLPPWWSTTFTWNLTHPPPLHPAAVGGGAGLGRGTAATTLFIVV
SAETVAGAAGRAGGYGGAAGGGGGRARRRAAEDKGGEGREKGGLGGGGEG
ELLWTLGVAPEVTFRYCDEDVCPVGRGECRAARGGSGDDYVTVSKCYCFY
GYGGEACGQRVVSYVSMLWQFCLLVLSNLAVVPAVRLSLRLGAATGAAPA
VVLGLNGAASAFYHMCDLELTCAWGMLSFHSLQALDFFFSFFSVAALVLH
LCPMPWDEPLVPRSTLSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021910NGX6/PGAP6/MYMK
IPR013032EGF-like_CS