mRNA_L-elsbetiae_contig15527.3886.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Match: D7FV79_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV79_ECTSI) HSP 1 Score: 213 bits (542), Expect = 2.940e-66 Identity = 100/119 (84.03%), Postives = 112/119 (94.12%), Query Frame = 1 Query: 1 VEQMDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAMAKTPGRRRKSSSMEVSQQSAVMMTFVLALSVGVAISVLLGWHLYLICTAQTTIEFYQNQTNRSRARQWGEV 357 + MDHHCPWMNNCVGYLNYRYFVLFLMYMFVGC YAVLVSAPQF+AMAK+PG RRK S +E++Q SA+MMTFVLALSVGVAISVLLGWH+YLIC+AQTTIEFYQNQ++RSRARQWGE+ Sbjct: 182 IVNMDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCVYAVLVSAPQFMAMAKSPGARRKPSPLEMTQHSAIMMTFVLALSVGVAISVLLGWHIYLICSAQTTIEFYQNQSHRSRARQWGEL 300
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Match: A0A7S0XLV6_9STRA (Palmitoyltransferase n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0XLV6_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.000e-34 Identity = 68/117 (58.12%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 1 VEQMDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAMAKTPGRRRKSSSMEVSQQSAVMMTFVLALSVGVAISVLLGWHLYLICTAQTTIEFYQNQTNRSRARQWG 351 V MDH+CPWM N VGY NYRYFVLFL ++ V C Y VL++A FLA+A RR +SAVM TFVLALSVG+A+ +L WHL+L+ TAQTTIEFY N T R RAR G Sbjct: 198 VLNMDHYCPWMFNVVGYANYRYFVLFLFWVVVACLYGVLITATPFLALAAPSHARRPYRPKTRHARSAVMFTFVLALSVGIAVFILFAWHLFLVFTAQTTIEFYGNTTLRHRARSRG 314
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Match: A0A7S2FY83_9STRA (Palmitoyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FY83_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.920e-33 Identity = 63/118 (53.39%), Postives = 83/118 (70.34%), Query Frame = 1 Query: 1 VEQMDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAMAKTPGRRRKSSSMEVSQQSAVMMTFVLALSVGVAISVLLGWHLYLICTAQTTIEFYQNQTNRSRARQWGE 354 V MDH+CPWM N VGYLNYRYFVLFL ++FV C Y + ++ F+ M + R M+ S +SAV TF+LALS+G+A+S+L WH+YL+ T+QTTIEFY NQT + RAR G+ Sbjct: 193 VLNMDHYCPWMFNVVGYLNYRYFVLFLFWIFVACVYGLCLTTLPFIQMVQRNKGSRYRLKMDFSVRSAVSYTFILALSIGLAVSLLFFWHVYLVLTSQTTIEFYGNQTKKFRARLRGQ 310
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Match: A0A7S2V0T0_9STRA (Palmitoyltransferase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0T0_9STRA) HSP 1 Score: 124 bits (310), Expect = 9.700e-33 Identity = 55/102 (53.92%), Postives = 79/102 (77.45%), Query Frame = 1 Query: 1 VEQMDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAMAKTPGRRRKSS-SMEVSQQSAVMMTFVLALSVGVAISVLLGWHLYLICTAQTTI 303 V +MDHHCPW+NNCVG+ NYRYF LF+MY+++GC Y VL++ F+ + G R + +E S++SAV++TF+LA+SVG A+++L GWH+YLIC+ QTTI Sbjct: 148 VLKMDHHCPWVNNCVGFYNYRYFFLFMMYLWIGCVYGVLITFHPFIKLMHLEGHHRVTRLKIEASERSAVVLTFILAVSVGFALTILGGWHVYLICSGQTTI 249
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Match: F0YAZ2_AURAN (Palmitoyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAZ2_AURAN) HSP 1 Score: 125 bits (315), Expect = 1.380e-32 Identity = 66/120 (55.00%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 1 VEQMDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAMAKTPGRRRKSSSMEVSQQ--SAVMMTFVLALSVGVAISVLLGWHLYLICTAQTTIEFYQNQTNRSRARQWGE 354 V MDH+CPWM NCVG+ NYRYFVLFL Y+ CAY + ++ F+ +A P R + V+ Q +AVM TFVLA+SVG+A+++L GWH YL+ TAQTTIEFY N T R RAR GE Sbjct: 176 VLNMDHYCPWMFNCVGFANYRYFVLFLFYVSCACAYGICLTFADFVLIAG-PRNPRMIRGVRVTNQMRTAVMFTFVLAVSVGLAVAILFGWHCYLVLTAQTTIEFYGNHTLRLRARVRGE 294
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Match: A0A4D9D1P1_9STRA (Palmitoyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1P1_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.250e-31 Identity = 62/119 (52.10%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 10 MDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAMAKTPG-----RRRKSSSMEVSQQSAVMMTFVLALSVGVAISVLLGWHLYLICTAQTTIEFYQNQTNRSRARQWG 351 MDHHCPW+ CVG+ NYRYFVLF+MY++ C Y L+ FL M G R S +SA+++TFVLA SVG+A++ LLGWH++LI T QTTIEFY N+ R RARQ G Sbjct: 1 MDHHCPWIGQCVGHYNYRYFVLFMMYLWAACVYGALLLGRPFLEMMYGSGQGGGPRMPVIVGSLASARSAIILTFVLAFSVGLALTGLLGWHVFLITTGQTTIEFYINKARRERARQRG 119
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Match: W7TKM1_9STRA (Palmitoyltransferase n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKM1_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.430e-30 Identity = 64/122 (52.46%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 1 VEQMDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAM---AKTPGRRRKSSSME--VSQQSAVMMTFVLALSVGVAISVLLGWHLYLICTAQTTIEFYQNQTNRSRARQWG 351 V +MDHHCPW+ CVGY NYRYFVLF+MY++ C Y L+ FL M + G R + S +SA+++TFVLA SVG+A++ LLGWH++LI T QTTIEFY N+ R RARQ G Sbjct: 214 VLKMDHHCPWIGQCVGYYNYRYFVLFMMYLWAACVYGALLLGRPFLDMMYGSSQGGGPRMPVIVGSLASARSAIILTFVLAFSVGLALTGLLGWHVFLITTGQTTIEFYINKARRERARQRG 335
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Match: A0A8J2SCA7_9STRA (Palmitoyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCA7_9STRA) HSP 1 Score: 118 bits (296), Expect = 6.610e-30 Identity = 61/115 (53.04%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 1 VEQMDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAMAKTPGRRRKSSSMEVSQ-QSAVMMTFVLALSVGVAISVLLGWHLYLICTAQTTIEFYQNQTNRSRAR 342 V MDH+CPWM NCVG+ NYRYFVLFL Y+ V C Y ++ P F +A S+ +AVM TFVL++SVG+A+ +L WHLYL+ TAQTTIEFY N T R RAR Sbjct: 157 VLNMDHYCPWMFNCVGFANYRYFVLFLFYVTVACGYGAALTFPDFSTVAGLRSFAAFRGPRPTSRAHTAVMFTFVLSISVGIAVMLLFSWHLYLVLTAQTTIEFYGNCTLRRRAR 271
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Match: A0A813EFF1_POLGL (Palmitoyltransferase (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EFF1_POLGL) HSP 1 Score: 108 bits (269), Expect = 8.550e-28 Identity = 53/121 (43.80%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 1 VEQMDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAMAKTPGRRRKSSSMEVSQQSA--VMMTFVLALSVGVAISVLLGWHLYLICTAQTTIEFYQNQTNRSRARQWGEV 357 V +MDHHCPW+NNCVG+ NYRYF LF++++ + C Y V++S P F+ GRRR+ S + A V ++++++L + +A+ +L G+H+YL+ T QTTIEF+ N N+ A++ GEV Sbjct: 6 VLKMDHHCPWINNCVGWNNYRYFCLFMLFLAMSCLYVVIISYPIFMQAMFPNGRRRQGSPRHLGFWDAQCVALSWLMSLCILLALCLLGGFHVYLVLTNQTTIEFHSNFGNKDLAKRRGEV 126
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Match: A0A7J6QLF6_PEROL (Palmitoyltransferase (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QLF6_PEROL) HSP 1 Score: 105 bits (261), Expect = 8.780e-26 Identity = 51/119 (42.86%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 1 VEQMDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAMAKTPGRRRKSSSMEVSQQSAVMMTFVLALSVGVAISVLLGWHLYLICTAQTTIEFYQNQTNRSRARQWGEV 357 V +MDHHCPW+NNCVG+ NY+YF LFL+Y+ + C + VL+ F + A P R ++ + + AV M+FV+ L++ +A+ +LLG+H YL+ T QTTI+F N A+Q G + Sbjct: 95 VLKMDHHCPWLNNCVGHRNYKYFYLFLLYLELCCLFVVLLFFEPF-STAMFPTRGSPRWNISIGYKQAVAMSFVICLAIAIAVGILLGFHTYLVLTNQTTIDFQSNVREARLAKQQGRL 212 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15527.3886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15527.3886.1 >prot_L-elsbetiae_contig15527.3886.1 ID=prot_L-elsbetiae_contig15527.3886.1|Name=mRNA_L-elsbetiae_contig15527.3886.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp MDHHCPWMNNCVGYLNYRYFVLFLMYMFVGCAYAVLVSAPQFLAMAKTPGback to top mRNA from alignment at L-elsbetiae_contig15527:164..3781+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15527.3886.1 ID=mRNA_L-elsbetiae_contig15527.3886.1|Name=mRNA_L-elsbetiae_contig15527.3886.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3618bp|location=Sequence derived from alignment at L-elsbetiae_contig15527:164..3781+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15527:164..3781+ >mRNA_L-elsbetiae_contig15527.3886.1 ID=mRNA_L-elsbetiae_contig15527.3886.1|Name=mRNA_L-elsbetiae_contig15527.3886.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=696bp|location=Sequence derived from alignment at L-elsbetiae_contig15527:164..3781+ (Laminarionema elsbetiae ELsaHSoW15)back to top |