prot_L-elsbetiae_contig1552.3883.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1552.3883.1
Unique Nameprot_L-elsbetiae_contig1552.3883.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length64
Homology
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Match: D7G3Y4_ECTSI (Trafficking protein particle complex subunit 2, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y4_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 4.880e-26
Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MSVFMIVGRNEPLYEADLSSVGNSSSNSGGRASAGDESAHLNQFIVHSALDMVERKQWSTPAT 63
            MSVFMIVGRNEPLYEADL S G  +S++ GR+S  +ESAHLNQFIVHSALDMVERKQWSTPAT
Sbjct:    1 MSVFMIVGRNEPLYEADLGSGGGGNSSTAGRSS--EESAHLNQFIVHSALDMVERKQWSTPAT 61          
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Match: A0A6H5KJU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU0_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 4.130e-25
Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MSVFMIVGRNEPLYEADLSSVGNSSSNSGGRASAGDESAHLNQFIVHSALDMVERKQWSTPAT 63
            MSVFMIVGRNEPLYEADL S G  +S++ GR+S  +ESAHLNQFIVHSALDMVERKQWSTPAT
Sbjct:    1 MSVFMIVGRNEPLYEADLGSGGGGNSSTAGRSS--EESAHLNQFIVHSALDMVERKQWSTPAT 61          
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Match: A0A4D9CUE9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUE9_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 4.060e-13
Identity = 33/62 (53.23%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    1 MSVFMIVGRNEPLYEADLSSVGNSSSNSGGRASAGDE-SAHLNQFIVHSALDMVERKQWSTP 61
            MS+F+IVG+NEP++EAD S+   S+  S  + SA +E +A LNQFI+HS+LDM+E+  WS+P
Sbjct:    1 MSLFVIVGKNEPIFEADFSTSSTSTGASPNKVSAAEEGNAQLNQFILHSSLDMMEKAMWSSP 62          
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Match: A0A835Z2S7_9STRA (Sedlin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2S7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.010e-12
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    3 VFMIVGRNEPLYEADLSSVGNSSSNSGGRASAGDESAHLNQFIVHSALDMVERKQW 58
            VFMIVGRNEPLYEA+    G  S+N   RA A  E++HL+QFI+HS+LD+VERKQW
Sbjct:    4 VFMIVGRNEPLYEAEF---GLKSANPAQRA-AERENSHLSQFIIHSSLDLVERKQW 55          
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Match: A0A397J2M1_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397J2M1_9GLOM)

HSP 1 Score: 57.4 bits (137), Expect = 8.580e-9
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    4 FMIVG-RNEPLYEADLSSVGNSSSNSGGRASAGDESAHLNQFIVHSALDMVERKQWSTPA 62
            F+IVG ++ P+YE +  + G  S N        DES HLNQFIVHSALD+VE  QWST A
Sbjct:    5 FVIVGTKDNPIYELEFGTSGLKSGNIDSNLKK-DESKHLNQFIVHSALDLVEEMQWSTNA 63          
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Match: A0A7S2FMM3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMM3_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.660e-8
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    3 VFMIVGRNEPLYEADLSSVGNSSSNSGGRASAGDES-AHLNQFIVHSALDMVERKQWSTPAT 63
            +FMIVG  EPLY  +LS            A A DES +HLNQFIVHSALD+V+R  ++T AT
Sbjct:   56 LFMIVGSKEPLYSLELS------------AQAADESQSHLNQFIVHSALDLVDRMAYTTNAT 105          
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Match: K0TLI7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLI7_THAOC)

HSP 1 Score: 56.6 bits (135), Expect = 1.670e-8
Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    3 VFMIVGRNEPLYEADL-SSVGNSSSNSGGRASAGDESAHLNQFIVHSALDMVERKQWST 60
            +F+IVG+NEPLYEA++ +S G  SS      S+GD S   N F++HSALD+VE+  W+T
Sbjct:    7 LFVIVGKNEPLYEAEIDTSTGIHSS------SSGDLSTRQNYFVLHSALDLVEKSAWTT 59          
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Match: A0A7S3PQB4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQB4_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.370e-8
Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 0
Query:    3 VFMIVGRNEPLYEADLSSVGNSS------SNSGGRASAGDESAHLNQFIVHSALDMVERKQWST 60
            VF IVG+++ +YE + SS G SS      S+    A    ESAHL QF++HSALDMVE + W T
Sbjct:    5 VFAIVGKHDLVYETEFSSSGGSSVAVAAGSDPNVGAKTSSESAHLYQFVMHSALDMVEERMWET 68          
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Match: A0A433D798_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D798_9FUNG)

HSP 1 Score: 54.7 bits (130), Expect = 2.880e-8
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    5 MIVG-RNEPLYEADLSSVGNSSSNSGGRASAGDESAHLNQFIVHSALDMVERKQWSTPAT 63
            +IVG R++P+YEADL     +     G     +ES HLNQFI+HSALD+VE  QW+T AT
Sbjct:    8 VIVGSRDDPVYEADLGPSSKAPPVPEGTKK--EESKHLNQFIIHSALDIVEEVQWNTTAT 65          
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Match: A0A6J3M696_9PEZI (trafficking protein particle complex subunit 2 n=1 Tax=Dissoconium aciculare CBS 342.82 TaxID=1314786 RepID=A0A6J3M696_9PEZI)

HSP 1 Score: 56.2 bits (134), Expect = 4.070e-8
Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    4 FMIVG-RNEPLYEADLSSVGNSSSNSGGRASAGDESAHLNQFIVHSALDMVERKQWST 60
            F I+G R+ PL+EAD    G S     G A   DE+ H+NQFIVH+ALD+VE  QWST
Sbjct:    5 FSIIGTRDNPLFEADF---GTSKVGGDGIARFRDEAKHMNQFIVHAALDLVEEAQWST 59          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1552.3883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Y4_ECTSI4.880e-2680.95Trafficking protein particle complex subunit 2, pu... [more]
A0A6H5KJU0_9PHAE4.130e-2580.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CUE9_9STRA4.060e-1353.23Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835Z2S7_9STRA2.010e-1264.29Sedlin n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A397J2M1_9GLOM8.580e-953.33Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
A0A7S2FMM3_9STRA1.660e-853.23Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K0TLI7_THAOC1.670e-850.85Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3PQB4_9STRA2.370e-848.44Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A433D798_9FUNG2.880e-851.67Uncharacterized protein n=1 Tax=Jimgerdemannia fla... [more]
A0A6J3M696_9PEZI4.070e-853.45trafficking protein particle complex subunit 2 n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.70coord: 1..63
e-value: 3.2E-10
score: 42.1
IPR006722Trafficking protein particle complex subunit 2PFAMPF04628Sedlin_Ncoord: 7..60
e-value: 5.7E-10
score: 39.4
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 3..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1552contigL-elsbetiae_contig1552:24125..24316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1552.3883.1mRNA_L-elsbetiae_contig1552.3883.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1552 24011..24486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1552.3883.1 ID=prot_L-elsbetiae_contig1552.3883.1|Name=mRNA_L-elsbetiae_contig1552.3883.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=64bp
MSVFMIVGRNEPLYEADLSSVGNSSSNSGGRASAGDESAHLNQFIVHSAL
DMVERKQWSTPAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006722Sedlin
IPR011012Longin-like_dom_sf