prot_L-elsbetiae_contig15514.3878.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15514.3878.1
Unique Nameprot_L-elsbetiae_contig15514.3878.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length78
Homology
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BLAST of mRNA_L-elsbetiae_contig15514.3878.1 vs. uniprot
Match: A0A6H5J6X8_9PHAE (NGN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6X8_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 3.790e-32
Identity = 61/78 (78.21%), Postives = 73/78 (93.59%), Query Frame = 0 
Query:    1 MINDMERIVGFMGEERDQAKRLIPEKMDPKDIEGMRESEKALGDNKIPNLLGVGDLVEISEGPYALKKGEVSKIKEGE 78
            ++NDM+RIVGF+GE RD+ K+LIPE+MDP+DIEG++ SEKALG NKIP LLGVGDLVEISEGP+ALKKGEVSKIK+GE
Sbjct:  272 IVNDMDRIVGFVGEARDEDKKLIPERMDPEDIEGIKASEKALGANKIPQLLGVGDLVEISEGPFALKKGEVSKIKDGE 349
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BLAST of mRNA_L-elsbetiae_contig15514.3878.1 vs. uniprot
Match: D7FH57_ECTSI (Putative transcription antitermination protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH57_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 4.610e-31
Identity = 60/78 (76.92%), Postives = 73/78 (93.59%), Query Frame = 0 
Query:    1 MINDMERIVGFMGEERDQAKRLIPEKMDPKDIEGMRESEKALGDNKIPNLLGVGDLVEISEGPYALKKGEVSKIKEGE 78
            ++NDM+RIVGF+GE RD+ K+LIPE+M+P+DIEG++ SEKALG NKIP LLGVGDLVEISEGP+ALKKGEVSKIK+GE
Sbjct:  295 IVNDMDRIVGFVGEARDEDKKLIPERMEPEDIEGIKASEKALGANKIPQLLGVGDLVEISEGPFALKKGEVSKIKDGE 372
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15514.3878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J6X8_9PHAE3.790e-3278.21NGN domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FH57_ECTSI4.610e-3176.92Putative transcription antitermination protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15514contigL-elsbetiae_contig15514:114..2138 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15514.3878.1mRNA_L-elsbetiae_contig15514.3878.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15514 99..2138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15514.3878.1 ID=prot_L-elsbetiae_contig15514.3878.1|Name=mRNA_L-elsbetiae_contig15514.3878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp
MINDMERIVGFMGEERDQAKRLIPEKMDPKDIEGMRESEKALGDNKIPNL
LGVGDLVEISEGPYALKKGEVSKIKEGE
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