mRNA_L-elsbetiae_contig155.3869.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 185 bits (470), Expect = 8.480e-51 Identity = 244/409 (59.66%), Postives = 280/409 (68.46%), Query Frame = 1 Query: 40 MFDLLAVVLTSKQWAELLKAPLERAVAAGKRALAQKMLRAGAERGDSLHKAAQGGHGEIVHNLVENGASVHARDTGGSTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAGADVNLQFGDRKGSVVQVAAEKGLVEVMRAAIECGADVNVITTVRSTPLHHAAVFNKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGMSGAAEVVESPLRSGADETILNDGGEAAADVVGEATVVAEGEYPLPEDVHRVRQLLANAPADRIWRRRGYLVLCRAHLDRMRQIDWTSSA-CAGVARRIRSRANLGRTEIGSCTGTAGGNSIVGGWAGGDWAVVVARLLVLQEEDIFRSIVGYL 1263 M D + +LTS+Q AELL+A LE A A G + LAQ+++RAGAE GD+LH+A GGH EIV +L+E+ AS+ A D G TPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+ K AA +G VE++RA IE GADV+ + + T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AG GAAEVV S LR+GADETI N G A D++GE E E L EDV RVR+LLANAPADR WRRRGYL++CRA DR+ + TS VARR RSRA + R G AG S V GG+WAVVV++++ LQEE IFR+IV YL Sbjct: 1 MVDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDV---EEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARAR-----GIAG-ESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 136 bits (342), Expect = 1.620e-32 Identity = 161/349 (46.13%), Postives = 192/349 (55.01%), Query Frame = 1 Query: 10 REALRGAEIQMFDLLAVVLTSKQWAELLKAPLERAVAAGKRALAQKMLRAGAERGDSLHKAAQGGHGEIVHNLVENGASVHARDTGGSTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAGADVNLQFGDRKGSVVQVAAEKGLVEVMRAAIECGADVNVITTVRSTPLHHAAVFNKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---GMSGAAEVVESPLRSGADETILNDGGEAAADVVGEATVVAEGEYPLPEDVHRVRQLLANAPADRIWRRRGYLVLCRAHLDRM 1047 R ALRG E ++FDL A T KQWA L++ LE A G L +K++ AGAE G ++H A +GGH +I L+E+GAS A D G TPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AD+N ++GDR+ S + + A +G V+ +R IE GADV+ LHHA NKVE A G G EVV+ LR GADET + G AAD +G + E +PE+ VR+LLANAPADR WRRR LVLCRA D+M Sbjct: 7 RGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIG---MKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKM 352
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 117 bits (292), Expect = 2.700e-25 Identity = 195/455 (42.86%), Postives = 244/455 (53.63%), Query Frame = 1 Query: 10 REALRGAEIQMFDLLAVVLTSKQWAELLKAPLERAVAAGKRALAQKMLRAGAERGDSLHKAAQGGHGEIVHNLVENGASVHARDTGGSTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAGADVNLQ----------------------------------FGDRKG-SVVQVAAEKGLVEVMRAAIECGADVNVITTVRSTPLHHAAVFNKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGMSGAAEVVESPLRSGADETILNDGGEAAADVVGEATVVAEGEYPLPEDVHRVRQLLANAPADRIWRRRGYLVLCRAHL--DRMRQIDWTSSACAGVARRIRSRANLGRTEIGSCTGTAGGNSIVGGWAGGDWAVVVARLLVLQEEDIFRSIVGYL 1263 R+ LRGA +++ DL++ T ++WA LK PLE AV G R LA ++R GAE G ++++A G E++ L++NGASV A D G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+ GD + +A V+ ++ +E GAD+ + RSTPLH A+ XXXXXXXXXXXXXXXXXXXXXX AG G+AE+V+ LR GADET + G+ AD VG + G+ L +V V +LLANAPADR WRRRG LVLCRA L R+RQ D + G++RR RSRA L R++ G G G +W R++ L+EE IFRS+VG+L Sbjct: 6 RKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASF--------------------------------KQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMEL--GDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTR-GGLSRRTRSRAKLARSDA---VGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 2.170e-16 Identity = 71/168 (42.26%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 799 AGMSGAAEVVESPLRSGADETILNDGGEAAADVVGEATVVAEGEYPLPEDVHRVRQLLANAPADRIWRRRGYLVLCRAHLD--RMRQIDWTSSA-CAGVARRIRSRANLGRTEIGSCTGTAGGNSIVGGWAGGDWAVVVARLLVLQEEDI----------FRSIVGYL 1263 AG G AE+V+ LR GADET +++ G AAD+V + E L EDV RVR+LLA APADR WRRRG+L+L RAH R++ TS A AGVA+R RS R EI DWA VV+ L+ + I F IVGYL Sbjct: 633 AGSPGTAEMVDLLLRRGADETAVSENGHTAADMV---VLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEI-------------------DWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 4.100e-15 Identity = 118/192 (61.46%), Postives = 128/192 (66.67%), Query Frame = 1 Query: 517 MRAAIECGADVNVITTVRSTPLHHAAVFNKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGMSGAAEVVESPLRSGADETILNDGGEAAADVVGEATVVAEGEYPLPEDVHRVRQLLANAPADRIWRRRGYLVLCRAHLDRMRQIDWTSSACAGVAR 1092 M AAIE GA+V+ V TP HHAA+ N VE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AG G EVV+S LRSGADETIL+ G AA D++ + G + E RVR LL NA ADR W RR YLVLCR H DR A +GVAR Sbjct: 1 MSAAIERGAEVDAADAVERTPPHHAALLNNVEEIDVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMI---SWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDR---------ADSGVAR 180
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 4.930e-15 Identity = 77/229 (33.62%), Postives = 100/229 (43.67%), Query Frame = 1 Query: 427 LAAGADVNLQFG--DRKGSVVQVAAEKGLVEVMRAAIECGADVNVITTVRSTPLHHAAVFNKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGMSGAAEVVESPLRSGADETILNDGGEAAADVVGEATVVAEGEYPL-PEDVHRVRQLLANAPADRIWRRRGYLVLCRAHLDRMRQIDWTSSACAGVARRIRS 1104 LAA D ++++ +R SV+ +AA+KG V+RA ++ G DVN T T LH AA+ N+V AG G +V+ LR GADET LN G AA+VVG A PL +DV RVR LL NAP DR WRRRG+LVLCRA + R++ SS + R+RS Sbjct: 91 LAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAA--CPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRS 316
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 6.310e-15 Identity = 213/420 (50.71%), Postives = 258/420 (61.43%), Query Frame = 1 Query: 10 REALRGAEIQMFDLLAVVLTSKQWAELLKAPLERAVAAGKRALAQKMLRAGAERGD-SLHKAAQGGHGEIVHNLVENGASVHARDTGGSTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAGADVNLQFGDRKGSVVQVAAEKGLVEVMRAAIECGADVNVITTVRSTPLHHAAVFNKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGMS-GAAEVVESPLRSGADETILNDGGEAAADVVGEATVVAEGEYPLPEDVHRVRQLLANAPADRIWRRRGYLVLCRAHLDRMRQIDWTSSACAGVARRIRSRANLGRTEIGSCTGTAGGNSIVGGWAGGDWAVVVARLLVLQEEDIFRSIVGYL 1263 +E ++G ++ DL+ + +E L APLE AV +G LA+K+++AGA+ G +LH+ + GH + L+ENGASVH + TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + ++ + + S + AA VE++R I+ G +V+ + T L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G G+A+VV+ LR GADETI++ GE AAD +G PED R R LLA APADR WRRRG LVLCRAH DR++ GGD A +VA + L+E +FR+IV YL Sbjct: 19 KETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTD----PEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQ-------------------------------------------LGGDLAGLVAGVGGLEEVGVFRTIVLYL 391
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.010e-14 Identity = 82/247 (33.20%), Postives = 103/247 (41.70%), Query Frame = 1 Query: 427 LAAGADVNLQFG--DRKGSVVQVAAEKGLVEVMRAAIECGADVNVITTVRSTPLHHAAVFNKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGMSGAAEVVESPLRSGADETILNDGGEAAADVVGEATVVAEGEYPL-PEDVHRVRQLLANAPADRIWRRRGYLVLCRAHLDRMRQIDWTSSACAGVARRIRSRANLGRTEIGSCTGTAGG 1158 LAA D ++ + +R SV+ AA+KG V+RA ++ G DVN T T LH AA+ N+V AG G +V+ LR GADET LN G AA+VVG A PL +D+ RVR LL NAPADR WRRRG LVLCRA + R++ SS+ G+ R S IG AGG Sbjct: 140 LAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAA--CPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMS------VSIGVRVSVAGG 377
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Match: A0A6H5KNN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNN1_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.350e-13 Identity = 62/154 (40.26%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 853 DETILNDGGEAAADVVGEATVVAEGEYPLPEDVHR------------VRQLLANAPADRIWRRRGYLVLCRAHL--DRMRQIDWTSSACAGVARRIRSRANLGRTEI---GSCTGTAGGNSIVGGWAGGDWAVVVARLLVLQEEDIFRSIVGYL 1263 D DG EA A + + + PLP +H V +LLANAPADR WRRRG LVLCRA L R+RQ D + G++RR RSRA L R++ G +GT G + G +W R++ L EE IFRS+VG+L Sbjct: 12 DIAAYTDGLEARASIC-----IFVPDAPLPTQLHHYARLAAGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTR-GGLSRRTRSRAKLARSDAVGAGCRSGTPEGGT------GDEWRSASRRVVEL-EEGIFRSVVGFL 152
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 2.030e-13 Identity = 113/318 (35.53%), Postives = 153/318 (48.11%), Query Frame = 1 Query: 172 GDSLHKAAQGGHGEIVHNLVENGASVHARDTGGSTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAGADVNLQFGDRKGSVVQVAAEKGLVEVMRAAIECGADVNVITTVRSTPLHHAAVFNKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGMSGAAEVVESPLRSGADETILNDGGEAAADVVGEATVVAEGEYPLPEDVHRVRQLLANAPADRIWRRRGYLVLCRAHLDRMRQIDWTSSACAGVARRIRSRANLGRT 1125 G +LH A + G+ E+V NL+E+GA V +D GSTPL +AAGA++N++ G K +V+ +AAEKG V+++RA ++ GADV + R LH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + VV+ LR GA ETI++ + AA ++ ++ P D RV +LL NAPADR WRRRG+L+LCRA+ +R+ +SS AR + A + R+ Sbjct: 2 GSALHAAVRYGYAEVVTNLLEHGACVSIKDARGSTPLQVAAECTPLFGALLFGHLTSARAL------------------------MAAGAEINVRCGLSKRTVLSLAAEKGDVDILRALVKNGADVTAVDNDRDMALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAVVALSKRARR-----------------------TSAVVDLLLRLGAHETIVDKRKKNAAGLLKKSW----WSCLYPGDAERVYKLLRNAPADRAWRRRGFLLLCRAYPERVPPRLDSSSTLVDAARTTHNEAKVPRS 268 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig155.3869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig155.3869.1 >prot_L-elsbetiae_contig155.3869.1 ID=prot_L-elsbetiae_contig155.3869.1|Name=mRNA_L-elsbetiae_contig155.3869.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=422bp MDGREALRGAEIQMFDLLAVVLTSKQWAELLKAPLERAVAAGKRALAQKMback to top mRNA from alignment at L-elsbetiae_contig155:40375..41640- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig155.3869.1 ID=mRNA_L-elsbetiae_contig155.3869.1|Name=mRNA_L-elsbetiae_contig155.3869.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1266bp|location=Sequence derived from alignment at L-elsbetiae_contig155:40375..41640- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig155:40375..41640- >mRNA_L-elsbetiae_contig155.3869.1 ID=mRNA_L-elsbetiae_contig155.3869.1|Name=mRNA_L-elsbetiae_contig155.3869.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2532bp|location=Sequence derived from alignment at L-elsbetiae_contig155:40375..41640- (Laminarionema elsbetiae ELsaHSoW15)back to top |