mRNA_L-elsbetiae_contig155.3865.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig155.3865.1
Unique NamemRNA_L-elsbetiae_contig155.3865.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Match: D8LAZ6_ECTSI (RNA exonuclease 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAZ6_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 1.590e-143
Identity = 283/473 (59.83%), Postives = 321/473 (67.86%), Query Frame = 2 
Query:  125 KKNSSGKTIASGTSTNAWEKLLA--GGAAAANKTVNAGTEQVQAGTAVA---------PRSDKLPTKT---------KGLGNLYTSMSNNWEHLLTGGKATTAAAGAGAGNGHVSDKSKRXXXXSGSKGSKRPRSEIGQAGSSDSATPTTPDFFPAKRVSNGVQPQPVTGPGGKAGSMKRKRASADSADGNAKDTSVKDIDTYVPGTKHKQQKQHHYSGAPNWKKPGSNVLNLAFLVQKEEAAAAXXXXXXXXGGNAAKHRGRDKGRGSRAGGRRGSEQALTAEEKAQYVALDCEMVGVGPGGCRSALARCCLVDWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLKGGLRLRQCQEEVAAILKDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKSLKILSQEHLDRMIQSGQHNPAEDARAAMDLYKLARFEWEKSLSAAGKMRGRRAVVDQQG 1483
            KK SS   +AS   T  WE+LL+  GG A+A   V  G  + ++ +  A         PRSDKLP K          KG+GNL+ S   NW  L  GG                      XXXX   +GS+RPR+EIG + S+  AT TTP+FF   R +        TG  GKAG  + + A A    G    ++      +V G      ++ H     + K+P SNVLNLAF  QKEE    XXXXXXXX    AKH G  KGRG R G    SEQALTA EKAQYVALDCEMVGVGPGGCRSALARCCLVDW+G+TIYDKHVTPNERVTDFRTFVSGVKANHLKGG+RLRQCQEEVAAILKD+ LVGHAL+NDLKALMMSHPPR+TRDTATYRPYQKAHGKAGGKLRP+SLK+LSQEHLDR IQ+GQHNPAEDA+AAMDLYKLARFEWEKSLSAAGKMRGR++ VDQQG
Sbjct:    4 KKGSSTAKVASSADTTLWEQLLSRGGGQASAAAAVTTGPARAKSSSRPAVPETAGKATPRSDKLPKKKRKAVASADPKGVGNLHKS---NWAMLAAGGXXXXXXXXXXX---XXXXXXXXXXXXXXQQGSERPRAEIGSSNSNVMAT-TTPNFFSVNRNTAVSGSSSTTGVSGKAGKKRIRTAGAGVGIGALTASTNGHAPNHVTGG----TREEHPGANKSTKRPRSNVLNLAFQAQKEEXXXXXXXXXXXX----AKHTGGVKGRGKRGG----SEQALTAAEKAQYVALDCEMVGVGPGGCRSALARCCLVDWDGDTIYDKHVTPNERVTDFRTFVSGVKANHLKGGVRLRQCQEEVAAILKDKVLVGHALTNDLKALMMSHPPRSTRDTATYRPYQKAHGKAGGKLRPRSLKLLSQEHLDRPIQTGQHNPAEDAKAAMDLYKLARFEWEKSLSAAGKMRGRKSFVDQQG 457
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BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Match: A0A836CG98_9STRA (RNA exonuclease 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG98_9STRA)

HSP 1 Score: 214 bits (544), Expect = 3.540e-60
Identity = 114/188 (60.64%), Postives = 133/188 (70.74%), Query Frame = 2 
Query:  926 QYVALDCEMVGVGPGGCRSALARCCLVDWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLKGG--LRLRQCQEEVAAILKDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKSLKILSQEHLDRMIQSGQHNPAEDARAAMDLYKLARFEWEKSLSAA--GKMRGRRAVVDQ 1477
            QYVALDCEMVG G  G  SALA+CC+ DW GNT+Y  +V P ERVTDFRTFVSG++A HLKG   + L +CQ+ VAAI K R +VGHAL NDLKALM+SHP    RDTATYRPY++ +    GKL P+SLK L+ E L R IQ G+H+PAEDA AAMDL+KL   EWE SL     GK  G    V Q
Sbjct:   46 QYVALDCEMVGTGVSGRHSALAQCCITDWHGNTLYCSYVRPPERVTDFRTFVSGIRATHLKGADAVTLLECQKAVAAITKGRIIVGHALHNDLKALMLSHPKNMIRDTATYRPYKRPN--RAGKLAPRSLKHLALEFLGREIQGGEHSPAEDAIAAMDLFKLKWAEWETSLKQGRVGKKAGASKPVRQ 231
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BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Match: W7U6T2_9STRA (RNA exonuclease 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6T2_9STRA)

HSP 1 Score: 213 bits (543), Expect = 3.320e-59
Identity = 105/176 (59.66%), Postives = 130/176 (73.86%), Query Frame = 2 
Query:  905 LTAEEKAQYVALDCEMVGVGPGGCRSALARCCLVDWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLKGGLRLRQCQEEVAAILKDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKSLKILSQEHLDRMIQSGQHNPAEDARAAMDLYKLARFEWEKSL 1432
            +T  EK+ YV LDCEMVGVG GG RSALAR  LVD++G  IYD+HV P ER+TDFRT+VSGVKA HLK  L L++C  +VA ++K + +VGHAL NDL+ LM+ HP    RDTA YR Y ++HGK GGKLRP+ LK L+ + L   IQ G+H+ A+DARAAM LY+  R EWEK L
Sbjct:   94 MTVMEKSLYVGLDCEMVGVGDGGKRSALARVTLVDFDGRVIYDEHVRPRERITDFRTWVSGVKAKHLKAALSLKECILQVADLVKGKIIVGHALKNDLQVLMLQHPVAMIRDTARYRAYMRSHGKEGGKLRPRRLKDLALDFLGMEIQEGKHDSADDARAAMLLYRAQRTEWEKEL 269
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BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Match: A0A6G0X6W8_9STRA (RNA exonuclease 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6W8_9STRA)

HSP 1 Score: 197 bits (500), Expect = 5.330e-53
Identity = 96/181 (53.04%), Postives = 130/181 (71.82%), Query Frame = 2 
Query:  899 QALTAEEKAQYVALDCEMVGVGPGGCRSALARCCLVDWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLKGGLRLRQCQEEVAAILKDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKSLKILSQEHLDRMIQSGQHNPAEDARAAMDLYKLARFEWEKSLSAA 1441
            Q +   + ++ VA+DCEMVGVG  G RS LARC +VD++GN +YD+HV P E+VTDFRT VSG+++  L+  +   +CQ++V AILKD+ LVGHAL NDL+ALM++HP    RDT  YRPY +     G KL PK+L+ L+QE LD+ IQ+G+H+  EDAR  ++LYK A   WEK+L AA
Sbjct:   66 QTIDWIDTSKIVAMDCEMVGVGLSGTRSVLARCSIVDFDGNVVYDEHVKPMEKVTDFRTHVSGIRSKSLRNAIPFPKCQQDVGAILKDKILVGHALRNDLQALMLTHPKPMIRDTTKYRPYMRRKVN-GTKLLPKALRHLAQEVLDKTIQTGEHDSVEDARTTLELYKKAMVPWEKALKAA 245
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BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Match: A0A1V9YXD8_9STRA (RNA exonuclease 4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YXD8_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.520e-52
Identity = 95/170 (55.88%), Postives = 124/170 (72.94%), Query Frame = 2 
Query:  932 VALDCEMVGVGPGGCRSALARCCLVDWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLKGGLRLRQCQEEVAAILKDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKSLKILSQEHLDRMIQSGQHNPAEDARAAMDLYKLARFEWEKSLSAA 1441
            VA+DCEMVGVG  G RS LARC +VD++GN +YDKHV P ERVTDFRT VSG+++ HL+  +   QCQ+EVA I +D+ LVGHAL ND++ALM++HP    RDT  YRPY +     G KL PKSLK L+ E L + IQ+G+H+  EDAR +++LYK A   WEK++ A+
Sbjct:   66 VAMDCEMVGVGSDGARSVLARCSIVDFDGNVVYDKHVKPMERVTDFRTHVSGIRSKHLRDAIPFTQCQQEVAEIFEDKILVGHALRNDMQALMLTHPKGMIRDTTKYRPYMRRKVN-GTKLFPKSLKNLALEVLKKTIQTGEHDSVEDARTSLELYKHAMAPWEKAIKAS 234
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BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Match: A0A024GQY3_9STRA (RNA exonuclease 4 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GQY3_9STRA)

HSP 1 Score: 194 bits (494), Expect = 5.350e-52
Identity = 93/172 (54.07%), Postives = 127/172 (73.84%), Query Frame = 2 
Query:  917 EKAQYVALDCEMVGVGPGGCRSALARCCLVDWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLKGGLRLRQCQEEVAAILKDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKSLKILSQEHLDRMIQSGQHNPAEDARAAMDLYKLARFEWEKSL 1432
            +K+  +A+DCEMVGVG  G + ALARC ++D++GN ++D+ V+P E+VTD+RT VSG++    K  +   QC +EV A+LKD+ +VGHAL ND +ALM+SHP R TRDTA YRPY + + K G KL P+SLK L+ E L R IQ G+H+  EDARAA++LYK  +F+WEK L
Sbjct:   89 KKSDILAMDCEMVGVGTDGRQDALARCSIIDFDGNVLFDRTVSPVEKVTDYRTRVSGIRPRSFKNAISFSQCLKEVGALLKDKIVVGHALKNDFQALMLSHPKRQTRDTARYRPYMR-YRKNGTKLLPRSLKTLAAEFLKRSIQEGEHDSVEDARAALELYKRQQFDWEKYL 259
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BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Match: A0A6U3UEZ7_9STRA (RNA exonuclease 4 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UEZ7_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.700e-50
Identity = 97/194 (50.00%), Postives = 131/194 (67.53%), Query Frame = 2 
Query:  875 AGGRRGSEQALTAEEKAQYVALDCEMVGVGPGGCRSALARCCLVDWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLK----GGLRLRQCQEEVAAILKDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKSLKILSQEHLDR--MIQSGQHNPAEDARAAMDLYKLARFEWEKSLSA 1438
            A  R+ +E+ +  EEKA+YVALDCEMVG+G  G  S LAR  LVDW GN + D  V   +RVTDFRT VSG+KA H+K      +  + C+ +V AILK++ LVGHAL ND  ALMM+HP    RDTA Y+P+  + G+ GGKLRP+ L+ L+++ L R   +Q   H+  +DA+AAMDLYK+ R +WEK + +
Sbjct:  145 AAARQAAEEKIPPEEKAKYVALDCEMVGIGTDGKTSCLARASLVDWYGNVLLDTFVLVPDRVTDFRTHVSGIKAKHIKETNQNAMTPKDCRMKVGAILKNKILVGHALRNDFAALMMNHPAADIRDTAKYKPFMVSRGRNGGKLRPRKLRDLTKQFLKRDIQVQGESHDSIDDAKAAMDLYKVVRVQWEKDIQS 338
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BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Match: A0A7S1YYA6_TRICV (RNA exonuclease 4 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YYA6_TRICV)

HSP 1 Score: 186 bits (471), Expect = 6.820e-50
Identity = 90/180 (50.00%), Postives = 126/180 (70.00%), Query Frame = 2 
Query:  902 ALTAEEKAQYVALDCEMVGVGPGGCRSALARCCLVDWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLKGGLRLRQCQEEVAAILKDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKSLKILSQEHLDRMIQSG--QHNPAEDARAAMDLYKLARFEWEKSLS 1435
            A+   E+++YVA+DCEMVG+G  G  SALAR  LVDW+G  + D  V   +RVTDFRT+VSGV++  ++  +    C+E+VA ILK + LVGH+L NDL AL++ HP    RDTA+YRPY K  G+ GGK+RP+ L+ L++E+L   IQ    +H+  +DARAAM+LYK AR  WE+ ++
Sbjct:   60 AVPEPERSRYVAVDCEMVGIGSAGRTSALARTSLVDWDGKVLLDTFVRVPDRVTDFRTWVSGVRSKDIRNAMEPEDCREKVAEILKGKVLVGHSLKNDLSALLLDHPRGDRRDTASYRPYMKPSGRGGGKMRPRRLRDLAEEYLGISIQGEGEEHSSIDDARAAMELYKFARTRWEREVA 239
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BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Match: A0A485LPN0_9STRA (RNA exonuclease 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPN0_9STRA)

HSP 1 Score: 189 bits (479), Expect = 8.670e-50
Identity = 92/181 (50.83%), Postives = 126/181 (69.61%), Query Frame = 2 
Query:  899 QALTAEEKAQYVALDCEMVGVGPGGCRSALARCCLVDWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLKGGLRLRQCQEEVAAILKDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKSLKILSQEHLDRMIQSGQHNPAEDARAAMDLYKLARFEWEKSLSAA 1441
            Q +   + A  VA+DCEMVGVG GG RS LARC +V ++G  +YD+HV P E+VTDFRT VSG+++  L+  +   +CQ +V  +LKD+ LVGHA+ NDL+ALM++HP    RDT  YRPY +     G KL PK+L+ L+QE LD+ IQ+G+H+  EDAR  ++LYK A   WEK+L A+
Sbjct:   83 QTIDWIDTALIVAMDCEMVGVGVGGTRSVLARCSIVGFDGTVLYDEHVKPLEKVTDFRTHVSGIRSKSLRNAIPFAKCQNDVGELLKDKILVGHAVRNDLQALMLTHPKPMLRDTTKYRPYMRRRMN-GTKLLPKALRHLAQEVLDKTIQTGEHDSVEDARTTLELYKRAMVPWEKALKAS 262
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BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Match: K3WDF0_GLOUD (RNA exonuclease 4 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDF0_GLOUD)

HSP 1 Score: 189 bits (479), Expect = 1.050e-49
Identity = 98/180 (54.44%), Postives = 124/180 (68.89%), Query Frame = 2 
Query:  899 QALTAE--EKAQYVALDCEMVGVGPGGCRSALARCCLVDWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLKGGLRLRQCQEEVAAILKDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKSLKILSQEHLDRMIQSGQHNPAEDARAAMDLYKLARFEWEKSL 1432
            Q  TAE  + AQ +A+DCEMVGVG  G  S LARC +VD++GN +YDKHV P E+VTDFRT VSG++++ LK  +   QC +EV  I+KD+ +VGHAL ND +ALM + P    RDTA YRPY +     G KL PKSLK L++E L   IQSG+H+  EDARA + LYK  +F WEK L
Sbjct:   94 QQKTAEWIDNAQILAMDCEMVGVGLSGKTSVLARCSIVDYDGNVVYDKHVRPVEKVTDFRTHVSGIRSHTLKNAIPFAQCLKEVGKIMKDKIIVGHALKNDFQALMFTPPKNMIRDTARYRPYMRRKMN-GTKLYPKSLKNLAEEVLGLQIQSGEHDSVEDARATLQLYKNEQFAWEKYL 272
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig155.3865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAZ6_ECTSI1.590e-14359.83RNA exonuclease 4 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A836CG98_9STRA3.540e-6060.64RNA exonuclease 4 n=1 Tax=Tribonema minus TaxID=30... [more]
W7U6T2_9STRA3.320e-5959.66RNA exonuclease 4 n=2 Tax=Monodopsidaceae TaxID=42... [more]
A0A6G0X6W8_9STRA5.330e-5353.04RNA exonuclease 4 n=1 Tax=Aphanomyces euteiches Ta... [more]
A0A1V9YXD8_9STRA1.520e-5255.88RNA exonuclease 4 n=1 Tax=Thraustotheca clavata Ta... [more]
A0A024GQY3_9STRA5.350e-5254.07RNA exonuclease 4 n=2 Tax=Albugo candida TaxID=653... [more]
A0A6U3UEZ7_9STRA1.700e-5050.00RNA exonuclease 4 n=3 Tax=Ditylum brightwellii Tax... [more]
A0A7S1YYA6_TRICV6.820e-5050.00RNA exonuclease 4 (Fragment) n=1 Tax=Trieres chine... [more]
A0A485LPN0_9STRA8.670e-5050.83RNA exonuclease 4 n=1 Tax=Aphanomyces stellatus Ta... [more]
K3WDF0_GLOUD1.050e-4954.44RNA exonuclease 4 n=1 Tax=Globisporangium ultimum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig155contigL-elsbetiae_contig155:1062..5297 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score449.1
Seed ortholog evalue2.5e-123
Seed eggNOG ortholog2880.D8LAZ6
KEGG koko:K18327
Hectar predicted targeting categoryother localisation
EggNOG free text desc.exonuclease activity
EggNOG OGsCOG0847@1,KOG2249@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Ec32 ortholog descriptionExonuclease
Ec32 orthologEc-27_005830.1
Exons4
Model size2607
Cds size1416
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig155.3865.1prot_L-elsbetiae_contig155.3865.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig155 2147..5191 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815632.662876-UTR-L-elsbetiae_contig155:1061..21461622815632.662876-UTR-L-elsbetiae_contig155:1061..2146Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig155 1062..2146 -
1691683003.385908-UTR-L-elsbetiae_contig155:1061..21461691683003.385908-UTR-L-elsbetiae_contig155:1061..2146Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig155 1062..2146 -
1622815632.7362452-UTR-L-elsbetiae_contig155:5191..52971622815632.7362452-UTR-L-elsbetiae_contig155:5191..5297Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig155 5192..5297 -
1691683003.4379964-UTR-L-elsbetiae_contig155:5191..52971691683003.4379964-UTR-L-elsbetiae_contig155:5191..5297Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig155 5192..5297 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815632.6861603-CDS-L-elsbetiae_contig155:2146..23021622815632.6861603-CDS-L-elsbetiae_contig155:2146..2302Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig155 2147..2302 -
1691683003.4029205-CDS-L-elsbetiae_contig155:2146..23021691683003.4029205-CDS-L-elsbetiae_contig155:2146..2302Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig155 2147..2302 -
1622815632.6996677-CDS-L-elsbetiae_contig155:3012..31771622815632.6996677-CDS-L-elsbetiae_contig155:3012..3177Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig155 3013..3177 -
1691683003.4130993-CDS-L-elsbetiae_contig155:3012..31771691683003.4130993-CDS-L-elsbetiae_contig155:3012..3177Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig155 3013..3177 -
1622815632.7117128-CDS-L-elsbetiae_contig155:3598..37731622815632.7117128-CDS-L-elsbetiae_contig155:3598..3773Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig155 3599..3773 -
1691683003.4215786-CDS-L-elsbetiae_contig155:3598..37731691683003.4215786-CDS-L-elsbetiae_contig155:3598..3773Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig155 3599..3773 -
1622815632.7240508-CDS-L-elsbetiae_contig155:4271..51911622815632.7240508-CDS-L-elsbetiae_contig155:4271..5191Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig155 4272..5191 -
1691683003.4298782-CDS-L-elsbetiae_contig155:4271..51911691683003.4298782-CDS-L-elsbetiae_contig155:4271..5191Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig155 4272..5191 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig155.3865.1

>prot_L-elsbetiae_contig155.3865.1 ID=prot_L-elsbetiae_contig155.3865.1|Name=mRNA_L-elsbetiae_contig155.3865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=472bp
MKRKKGKKNSSGKTIASGTSTNAWEKLLAGGAAAANKTVNAGTEQVQAGT
AVAPRSDKLPTKTKGLGNLYTSMSNNWEHLLTGGKATTAAAGAGAGNGHV
SDKSKRKKAKSGSKGSKRPRSEIGQAGSSDSATPTTPDFFPAKRVSNGVQ
PQPVTGPGGKAGSMKRKRASADSADGNAKDTSVKDIDTYVPGTKHKQQKQ
HHYSGAPNWKKPGSNVLNLAFLVQKEEAAAAAAAAATGAGGNAAKHRGRD
KGRGSRAGGRRGSEQALTAEEKAQYVALDCEMVGVGPGGCRSALARCCLV
DWEGNTIYDKHVTPNERVTDFRTFVSGVKANHLKGGLRLRQCQEEVAAIL
KDRTLVGHALSNDLKALMMSHPPRATRDTATYRPYQKAHGKAGGKLRPKS
LKILSQEHLDRMIQSGQHNPAEDARAAMDLYKLARFEWEKSLSAAGKMRG
RRAVVDQQGRGAPEALGAGST*
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mRNA from alignment at L-elsbetiae_contig155:1062..5297-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig155.3865.1 ID=mRNA_L-elsbetiae_contig155.3865.1|Name=mRNA_L-elsbetiae_contig155.3865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4236bp|location=Sequence derived from alignment at L-elsbetiae_contig155:1062..5297- (Laminarionema elsbetiae ELsaHSoW15)
CGCATGTCTCCGCGGGTGGCTGTTCGCTCCCCCTCTCCAAACCTCTCAAC
ACGCACACAGGCACTCGCTCTCTCTTGTCAATAGCACTACGCACTACCAC
AACATCATGAAGAGAAAGAAAGGCAAGAAAAATTCCTCGGGGAAGACCAT
TGCTTCCGGCACCAGCACTAATGCCTGGGAGAAGCTCCTAGCTGGCGGTG
CTGCCGCTGCCAACAAGACCGTGAACGCGGGGACGGAGCAGGTCCAAGCA
GGGACGGCGGTGGCACCAAGATCTGACAAGCTACCCACGAAGACCAAAGG
ACTGGGAAACTTATACACGAGCATGTCGAACAACTGGGAGCACCTCCTCA
CAGGAGGCAAAGCGACCACAGCAGCGGCAGGGGCAGGAGCTGGCAACGGC
CACGTCTCCGACAAGAGCAAGAGGAAGAAGGCTAAATCAGGCAGCAAGGG
CAGCAAACGGCCGAGGTCCGAGATCGGGCAGGCGGGAAGTAGTGATAGCG
CGACACCCACGACCCCCGACTTCTTCCCTGCGAAACGGGTCTCGAACGGG
GTGCAGCCACAGCCTGTCACAGGACCGGGCGGCAAGGCCGGCAGCATGAA
ACGGAAACGAGCTAGCGCTGATTCCGCCGATGGCAACGCTAAAGACACCT
CTGTCAAAGATATAGATACCTATGTCCCCGGCACGAAACACAAGCAGCAG
AAACAGCACCACTACTCGGGCGCGCCCAACTGGAAGAAGCCGGGCTCAAA
CGTCCTCAACCTCGCCTTCCTGGTCCAAAAGGAGGAAGCTGCCGCCGCTG
CCGCCGCCGCTGCTACCGGCGCGGGTGGGAACGCGGCCAAGCACAGAGGC
AGAGACAAGGGGCGAGGAAGCAGAGCGGGGGGCAGGAGAGGCTCGGAGCA
GGCGCTGACGGCAGAAGAAAAGGCGCAGTACGTGGCGTTGGACTGCGAGA
TGGTCGGCGTGGGGCCCGGTGGTTGCCGCAGCGCTCTCGCGCGGTGTTGT
CTTGTTGACTGGGAAGGAAACACAATGTGAGTCCCCACACGGCCAAAAAA
GACACTTGCCATCTGTATGATGGGGCGCCGTGTTTCTTGTGGGTTCGGTG
GGGAGACAACATTACGGGGCTCTAAGGTTGTACCTAGAACTTTTGTTGTA
CGTGGTTTGGCTATTTTTCATGGGCCGTGGTTTGGCTCTTACTTTTGTCG
TGGGCATGGTCTCGAAAGTCTCGCGCTGCTTGTGCTGTTTGCATGCATAA
GTGGCCAGGTCCTGCACCAGCGTCGGAAGCGTGCAGCATACAAGTTCCCC
TCATCTTCGTCGTGTTTTCAGGGAATGTGTGTGGGTCTCGACATCCATGT
AGTAGAAACCCCCTGCCCCCGTTAAGTGTATATGTGCATGTGCTGCCTCT
CGAAGCGACGCCTACTTGAACCGAACTCCCTGTACTGTCTGAGTATCGTT
CCTCACCCCCCCCCCCCCTCGCGTGACGCGGCCTCGACCCCGCGCTGCTT
TTGTGGCATGTCCTCTCTTGTCAGCTACGACAAGCACGTGACTCCCAACG
AGCGCGTGACGGACTTCCGGACCTTCGTGAGCGGTGTCAAGGCGAACCAT
CTCAAGGGTGGCCTGCGCCTGCGCCAGTGCCAGGAGGAAGTGGCAGCGAT
CTTGAAGGACAGAACGCTCGTCGGCCACGCCCTGAGTAACGACCTCAAGG
TATGCACGTTGCGCTCCAGCATGCGTAAGGAGCCCAGCTTGTTGTCAAGT
CAGCAAGCTATATACGTATTCGTCGTATGTACGTAGTCCTGTGGTGGGAA
GCGTTGGTGCGCGTGTTTTTTGGTCGGTATGTTGTTTTGTCTAGGAACGC
ACACCGTGGCAGTTTGCGGGGGAGGTTTACAAGTATTGTTTATTCTCGAC
ACGTTTTTTGATGCCTCGTTCCGTTGTGCGACGCCGAGCGAACGCGTTGC
TCTGCACGCCCTGTTTTTCGTCAGCGTGAAACTTGCGTGGAGAGAGAGGG
GGCGACGGGGCTAGGGTTGCCCTCGCTTATCTCCCCGCACCAGCATGCCG
TGCCGGACAGACCGAGCAATCACCCCCCCCCGTTTATGACGCTTTCACTA
ACGCCCCCGGTCTTTCCCAGGCTTTGATGATGAGCCACCCCCCGCGCGCG
ACGCGAGACACGGCCACGTATCGGCCGTACCAGAAGGCGCACGGCAAGGC
CGGCGGCAAGCTGCGACCCAAGTCCCTCAAGATCCTCTCGCAGGAGCACC
TCGATCGCATGATCCAGTCGGGTCAGCACAACCCGGTGAGAGCTTGTGCG
TGGTTTGACGCACTGCTGCGGTCAAGCAGGCTACATATTGTTTTTTGTTG
GGATGCGCGGCTTAAGTCTAGGCGCGCGCGATGCGGGAGAGGTCGCTGTA
GAGCACACATCGAGTACGACTGTACCGCCGCAGCCCGATTTATGGCTTTG
GATGGCTGAAGGCGGTTTGTTTATTGCGTGAGCTTTCAGCGAAAAAGGTC
GGTTATAAATAAAATGTTTTTGGTTCTCCGAGGAGGCCGGCGGTTGCCCA
GGCAAGCAAGTACACGTACGCGGTAAGGTTAAGGTTGCCACAAAAACTAA
GCGAATAGACGAGGCGTGGCGTAATCTTATCAAGTTTCGAAGATTTATTT
GCGTTCGGATGAGCTTGCAGGCCGCGTGCGCAGCCACTTTTCTACCGTAT
TAAAAATTCCATTCGATTTCGACAGATGAGTCACAGGGTTTGAGGCGATC
GAGGACTCTCTTGGAATCCAAGGACACATCTTCCCCTCTCTCGACAAGGA
TATCCATTGCATGTGTGCAGATACATCTGTACCGGACGTGAAAACTGAAT
CAAGCGGGACAGCTGGGCACCAGCCCCCATCGATCCGCGCTCGTGCTTGA
GCGGCAAGCAACGCCATCTTAAGCCCCCCCCCCGGCACTACTCTTTGTGT
CCCCCTTCCCGTGTGTTTACCGCCTGTGGGATCTACTTGTGCTAGGCGGA
GGATGCTCGAGCCGCGATGGACCTGTACAAACTAGCTCGTTTTGAGTGGG
AGAAGTCTCTGTCCGCGGCTGGGAAGATGCGAGGGCGCCGCGCAGTTGTG
GACCAGCAGGGTAGAGGGGCGCCAGAAGCATTGGGGGCAGGATCAACTTA
ACGGGACGGACGCGTGAGGTACCCGTGTCCCGGCCATATTTGATTGTGAT
TATCGTGGGCTAGGACCACCAAAGCCCCCCCTCAAAGAGACGTAAAAACG
AGCTTTATTCTCCGTCGTTAGGGTGCCAGTCGCCAAAAGCGATGGCGGCG
CGAGGGTCGGCCGCGAACATGCGGCAGAGGCTATGTATGTCCGGCGAGGC
GATCATGAGTATGGTTAAGGAGGTGCCTACCACGAGCGGATGTTCGGTCC
ATAGACAACCCCTCCTCGCGGCAGCCTCTCTCGGCGTCACAGTCCACTGT
TTTCACGGCCAACCCTGGCGCCGTGCAGCCACCAGGAGAACGGGTGGGGC
ATCGGGACGAGACACCAGACCTTCCCGCCATCCGGGAGGCGCTCGTGGGA
GGATTCCATGCACGCAGCATCGGTATAAGCTGCTGCCTCTGGAACTGCGT
TTATGGAGCATTCTCACGAACGCCTCCCGGATTGGGGGGGGGGTTACAGG
TGGCACTCGCCCTTGATCAGAGTTTGTGCAGCGTTTGGGGCTCAACCAAC
CGTAGTTTCGTGGTAATACCTCGCATGTGGTGCGGCTTTTGAGAAAGGGA
AAACTTTTACCAGAGAGCGCATTATGTACGTAAATAAATCTGTAGCTCGG
CACTGCAATATGCAGGACTACCGGAGCCACTGCGCTGCATGCAAGTAGCG
GCAGCAGAGGCTCCTTCCCTTTTTGGTATGTAGAACTAGCGCGCTTCAGC
GAGATTGTGTACCGCGAGCCAGAGGTCTGCCTTGGGTGTTGCGTGGCAAG
AGAGAAACGGGAGGAAATAAGGTGTCTGGCCTGAACACGGTTCGCTGTGG
TTGGTTCTCGTGTCATTTAGTGCGGGGAGTTCTGCCCCCTGCCCCCAGCC
GAAAGACCATAGCCACGCTTAGACGCTTGAAAAGGGCGTATTTCCATGTA
AGATTGCTTTTGGGGGGCGTTGGCGCAAAGCGGACCGGCTTGGTAGTCGC
CGTAATTCAGACATGACCCACGGGTGGTTGGTCTGCCGCCGAAAATAAAA
GTTATGGTGTCTGCCCCAGATAATCCAAGTATGTCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig155:1062..5297-

>mRNA_L-elsbetiae_contig155.3865.1 ID=mRNA_L-elsbetiae_contig155.3865.1|Name=mRNA_L-elsbetiae_contig155.3865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2832bp|location=Sequence derived from alignment at L-elsbetiae_contig155:1062..5297- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGAGAAAGAAAGGCAAGAAAAATTCCTCGGGGAAGACCATTGCTTC
CGGCACCAGCACTAATGCCTGGGAGAAGCTCCTAGCTGGCGGTGCTGCCG
CTGCCAACAAGACCGTGAACGCGGGGACGGAGCAGGTCCAAGCAGGGACG
GCGGTGGCACCAAGATCTGACAAGCTACCCACGAAGACCAAAGGACTGGG
AAACTTATACACGAGCATGTCGAACAACTGGGAGCACCTCCTCACAGGAG
GCAAAGCGACCACAGCAGCGGCAGGGGCAGGAGCTGGCAACGGCCACGTC
TCCGACAAGAGCAAGAGGAAGAAGGCTAAATCAGGCAGCAAGGGCAGCAA
ACGGCCGAGGTCCGAGATCGGGCAGGCGGGAAGTAGTGATAGCGCGACAC
CCACGACCCCCGACTTCTTCCCTGCGAAACGGGTCTCGAACGGGGTGCAG
CCACAGCCTGTCACAGGACCGGGCGGCAAGGCCGGCAGCATGAAACGGAA
ACGAGCTAGCGCTGATTCCGCCGATGGCAACGCTAAAGACACCTCTGTCA
AAGATATAGATACCTATGTCCCCGGCACGAAACACAAGCAGCAGAAACAG
CACCACTACTCGGGCGCGCCCAACTGGAAGAAGCCGGGCTCAAACGTCCT
CAACCTCGCCTTCCTGGTCCAAAAGGAGGAAGCTGCCGCCGCTGCCGCCG
CCGCTGCTACCGGCGCGGGTGGGAACGCGGCCAAGCACAGAGGCAGAGAC
AAGGGGCGAGGAAGCAGAGCGGGGGGCAGGAGAGGCTCGGAGCAGGCGCT
GACGGCAGAAGAAAAGGCGCAGTACGTGGCGTTGGACTGCGAGATGGTCG
GCGTGGGGCCCGGTGGTTGCCGCAGCGCTCTCGCGCGGTGTTGTCTTGTT
GACTGGGAAGGAAACACAATATGAAGAGAAAGAAAGGCAAGAAAAATTCC
TCGGGGAAGACCATTGCTTCCGGCACCAGCACTAATGCCTGGGAGAAGCT
CCTAGCTGGCGGTGCTGCCGCTGCCAACAAGACCGTGAACGCGGGGACGG
AGCAGGTCCAAGCAGGGACGGCGGTGGCACCAAGATCTGACAAGCTACCC
ACGAAGACCAAAGGACTGGGAAACTTATACACGAGCATGTCGAACAACTG
GGAGCACCTCCTCACAGGAGGCAAAGCGACCACAGCAGCGGCAGGGGCAG
GAGCTGGCAACGGCCACGTCTCCGACAAGAGCAAGAGGAAGAAGGCTAAA
TCAGGCAGCAAGGGCAGCAAACGGCCGAGGTCCGAGATCGGGCAGGCGGG
AAGTAGTGATAGCGCGACACCCACGACCCCCGACTTCTTCCCTGCGAAAC
GGGTCTCGAACGGGGTGCAGCCACAGCCTGTCACAGGACCGGGCGGCAAG
GCCGGCAGCATGAAACGGAAACGAGCTAGCGCTGATTCCGCCGATGGCAA
CGCTAAAGACACCTCTGTCAAAGATATAGATACCTATGTCCCCGGCACGA
AACACAAGCAGCAGAAACAGCACCACTACTCGGGCGCGCCCAACTGGAAG
AAGCCGGGCTCAAACGTCCTCAACCTCGCCTTCCTGGTCCAAAAGGAGGA
AGCTGCCGCCGCTGCCGCCGCCGCTGCTACCGGCGCGGGTGGGAACGCGG
CCAAGCACAGAGGCAGAGACAAGGGGCGAGGAAGCAGAGCGGGGGGCAGG
AGAGGCTCGGAGCAGGCGCTGACGGCAGAAGAAAAGGCGCAGTACGTGGC
GTTGGACTGCGAGATGGTCGGCGTGGGGCCCGGTGGTTGCCGCAGCGCTC
TCGCGCGGTGTTGTCTTGTTGACTGGGAAGGAAACACAATCTACGACAAG
CACGTGACTCCCAACGAGCGCGTGACGGACTTCCGGACCTTCGTGAGCGG
TGTCAAGGCGAACCATCTCAAGGGTGGCCTGCGCCTGCGCCAGTGCCAGG
AGGAAGTGGCAGCGATCTTGAAGGACAGAACGCTCGTCGGCCACGCCCTG
AGTAACGACCTCAAGCTACGACAAGCACGTGACTCCCAACGAGCGCGTGA
CGGACTTCCGGACCTTCGTGAGCGGTGTCAAGGCGAACCATCTCAAGGGT
GGCCTGCGCCTGCGCCAGTGCCAGGAGGAAGTGGCAGCGATCTTGAAGGA
CAGAACGCTCGTCGGCCACGCCCTGAGTAACGACCTCAAGGCTTTGATGA
TGAGCCACCCCCCGCGCGCGACGCGAGACACGGCCACGTATCGGCCGTAC
CAGAAGGCGCACGGCAAGGCCGGCGGCAAGCTGCGACCCAAGTCCCTCAA
GATCCTCTCGCAGGAGCACCTCGATCGCATGATCCAGTCGGGTCAGCACA
ACCCGGCTTTGATGATGAGCCACCCCCCGCGCGCGACGCGAGACACGGCC
ACGTATCGGCCGTACCAGAAGGCGCACGGCAAGGCCGGCGGCAAGCTGCG
ACCCAAGTCCCTCAAGATCCTCTCGCAGGAGCACCTCGATCGCATGATCC
AGTCGGGTCAGCACAACCCGGCGGAGGATGCTCGAGCCGCGATGGACCTG
TACAAACTAGCTCGTTTTGAGTGGGAGAAGTCTCTGTCCGCGGCTGGGAA
GATGCGAGGGCGCCGCGCAGTTGTGGACCAGCAGGGTAGAGGGGCGCCAG
AAGCATTGGGGGCAGGATCAACTTAAGCGGAGGATGCTCGAGCCGCGATG
GACCTGTACAAACTAGCTCGTTTTGAGTGGGAGAAGTCTCTGTCCGCGGC
TGGGAAGATGCGAGGGCGCCGCGCAGTTGTGGACCAGCAGGGTAGAGGGG
CGCCAGAAGCATTGGGGGCAGGATCAACTTAA
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