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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1317 |
| Cds size | 1308 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815632.345349-UTR-L-elsbetiae_contig15496:1392..1400 | 1622815632.345349-UTR-L-elsbetiae_contig15496:1392..1400 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig15496 1393..1400 + |
| 1691683003.1881728-UTR-L-elsbetiae_contig15496:1392..1400 | 1691683003.1881728-UTR-L-elsbetiae_contig15496:1392..1400 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig15496 1393..1400 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815632.3557491-CDS-L-elsbetiae_contig15496:1400..2708 | 1622815632.3557491-CDS-L-elsbetiae_contig15496:1400..2708 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig15496 1401..2708 + |
| 1691683003.1971047-CDS-L-elsbetiae_contig15496:1400..2708 | 1691683003.1971047-CDS-L-elsbetiae_contig15496:1400..2708 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig15496 1401..2708 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15496.3862.1 >prot_L-elsbetiae_contig15496.3862.1 ID=prot_L-elsbetiae_contig15496.3862.1|Name=mRNA_L-elsbetiae_contig15496.3862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=436bp
MQTEDNSSAKETRAEAPTVQPPASSDIDTDAKKGTVKSDIDPDVNMGSGK
SADTLDYNALPKAARDVLAPSVWAKMDTEERQKAFNSYPKLCNSVYTDTA
RREAKARQLEDDLLAGAKQEAIDQLSAETNKTTAASSHAETLQQQLQTLQ
ERLRAARTQERLQQQKADAAASKVETATLDLDKFRHPDAASSRKRTKKGK
SVKAEVASTPSSPGGAESDTPYTVHLKATASHTVQGAKTITVSEADDHFI
EALLEDVAHFGIIGCSSPNNQALQPLARALCDLLPPAIQPCGTVAQAVSF
LRDIMADGKDRRLIIDMSQALDALLTQLRSAYANRESTLLLLGDSYYQQI
KEKIINKQAAASGRQSGYTSSSSFERPREQVRRQQQRERRQERYSSPPRH
GKHEDAGRRRHHPPASSSSDTRRPRAAASSSHSSTK back to topmRNA from alignment at L-elsbetiae_contig15496:1393..2708+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig15496.3862.1 ID=mRNA_L-elsbetiae_contig15496.3862.1|Name=mRNA_L-elsbetiae_contig15496.3862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1316bp|location=Sequence derived from alignment at L-elsbetiae_contig15496:1393..2708+ (Laminarionema elsbetiae ELsaHSoW15)
GCCACAGCATGCAGACGGAGGACAACAGCAGCGCCAAGGAAACGAGAGCG
GAGGCGCCGACGGTTCAACCCCCAGCCTCCTCCGACATCGACACGGACGC
CAAAAAGGGGACTGTCAAATCCGACATCGACCCGGACGTCAACATGGGTT
CCGGCAAATCGGCAGACACCCTCGACTACAATGCACTGCCAAAGGCCGCG
CGCGATGTCCTCGCTCCGTCGGTGTGGGCGAAGATGGATACAGAGGAACG
ACAAAAAGCCTTCAACAGCTACCCCAAGCTCTGCAACTCCGTGTACACCG
ACACCGCTCGGCGGGAGGCGAAAGCCCGACAGCTGGAGGATGACCTACTC
GCTGGGGCTAAGCAAGAAGCGATCGACCAACTCTCGGCTGAAACCAACAA
GACCACGGCGGCATCGTCACATGCCGAGACTCTCCAGCAACAACTGCAAA
CCCTCCAAGAGCGACTCCGTGCCGCCCGAACCCAGGAGCGCCTTCAACAA
CAGAAGGCCGACGCCGCAGCTTCGAAGGTGGAAACGGCAACACTCGACCT
CGACAAATTCCGTCACCCAGATGCGGCCTCTTCCCGCAAACGCACGAAGA
AGGGGAAGAGCGTCAAAGCGGAGGTCGCATCTACACCTTCATCGCCGGGC
GGAGCTGAGTCGGACACACCGTACACGGTGCATCTCAAGGCCACGGCGAG
CCACACCGTACAGGGCGCCAAAACCATCACCGTTTCTGAGGCGGACGACC
ACTTCATCGAGGCTCTCCTAGAAGATGTAGCGCATTTCGGCATCATCGGC
TGCTCGTCTCCCAACAACCAGGCCCTGCAACCCCTGGCGCGCGCACTGTG
CGATCTCCTACCCCCGGCGATCCAGCCCTGCGGAACGGTGGCGCAAGCAG
TCAGTTTCCTTCGCGACATCATGGCGGACGGGAAGGATCGCCGGCTCATC
ATCGACATGTCCCAGGCGCTGGATGCTCTACTCACCCAGCTCCGGTCTGC
GTACGCCAATCGCGAATCCACTCTTTTGCTGCTGGGCGACAGCTACTACC
AGCAAATCAAGGAAAAAATCATCAACAAACAAGCTGCAGCATCTGGCCGT
CAATCGGGTTACACCTCGTCTTCGTCATTTGAACGGCCCAGGGAACAAGT
GCGCCGCCAACAACAACGGGAGCGCCGCCAGGAGCGCTACTCGTCGCCGC
CACGCCACGGCAAACACGAAGACGCGGGCCGCCGCCGACACCATCCGCCT
GCTTCCTCGTCCTCTGACACAAGGCGTCCGCGGGCCGCAGCGTCGTCATC
GCACTCGTCAACAAAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig15496:1393..2708+ >mRNA_L-elsbetiae_contig15496.3862.1 ID=mRNA_L-elsbetiae_contig15496.3862.1|Name=mRNA_L-elsbetiae_contig15496.3862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2616bp|location=Sequence derived from alignment at L-elsbetiae_contig15496:1393..2708+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGACGGAGGACAACAGCAGCGCCAAGGAAACGAGAGCGGAGGCGCC
GACGGTTCAACCCCCAGCCTCCTCCGACATCGACACGGACGCCAAAAAGG
GGACTGTCAAATCCGACATCGACCCGGACGTCAACATGGGTTCCGGCAAA
TCGGCAGACACCCTCGACTACAATGCACTGCCAAAGGCCGCGCGCGATGT
CCTCGCTCCGTCGGTGTGGGCGAAGATGGATACAGAGGAACGACAAAAAG
CCTTCAACAGCTACCCCAAGCTCTGCAACTCCGTGTACACCGACACCGCT
CGGCGGGAGGCGAAAGCCCGACAGCTGGAGGATGACCTACTCGCTGGGGC
TAAGCAAGAAGCGATCGACCAACTCTCGGCTGAAACCAACAAGACCACGG
CGGCATCGTCACATGCCGAGACTCTCCAGCAACAACTGCAAACCCTCCAA
GAGCGACTCCGTGCCGCCCGAACCCAGGAGCGCCTTCAACAACAGAAGGC
CGACGCCGCAGCTTCGAAGGTGGAAACGGCAACACTCGACCTCGACAAAT
TCCGTCACCCAGATGCGGCCTCTTCCCGCAAACGCACGAAGAAGGGGAAG
AGCGTCAAAGCGGAGGTCGCATCTACACCTTCATCGCCGGGCGGAGCTGA
GTCGGACACACCGTACACGGTGCATCTCAAGGCCACGGCGAGCCACACCG
TACAGGGCGCCAAAACCATCACCGTTTCTGAGGCGGACGACCACTTCATC
GAGGCTCTCCTAGAAGATGTAGCGCATTTCGGCATCATCGGCTGCTCGTC
TCCCAACAACCAGGCCCTGCAACCCCTGGCGCGCGCACTGTGCGATCTCC
TACCCCCGGCGATCCAGCCCTGCGGAACGGTGGCGCAAGCAGTCAGTTTC
CTTCGCGACATCATGGCGGACGGGAAGGATCGCCGGCTCATCATCGACAT
GTCCCAGGCGCTGGATGCTCTACTCACCCAGCTCCGGTCTGCGTACGCCA
ATCGCGAATCCACTCTTTTGCTGCTGGGCGACAGCTACTACCAGCAAATC
AAGGAAAAAATCATCAACAAACAAGCTGCAGCATCTGGCCGTCAATCGGG
TTACACCTCGTCTTCGTCATTTGAACGGCCCAGGGAACAAGTGCGCCGCC
AACAACAACGGGAGCGCCGCCAGGAGCGCTACTCGTCGCCGCCACGCCAC
GGCAAACACGAAGACGCGGGCCGCCGCCGACACCATCCGCCTGCTTCCTC
GTCCTCTGACACAAGGCGTCCGCGGGCCGCAGCGTCGTCATCGCACTCGT
CAACAAAGATGCAGACGGAGGACAACAGCAGCGCCAAGGAAACGAGAGCG
GAGGCGCCGACGGTTCAACCCCCAGCCTCCTCCGACATCGACACGGACGC
CAAAAAGGGGACTGTCAAATCCGACATCGACCCGGACGTCAACATGGGTT
CCGGCAAATCGGCAGACACCCTCGACTACAATGCACTGCCAAAGGCCGCG
CGCGATGTCCTCGCTCCGTCGGTGTGGGCGAAGATGGATACAGAGGAACG
ACAAAAAGCCTTCAACAGCTACCCCAAGCTCTGCAACTCCGTGTACACCG
ACACCGCTCGGCGGGAGGCGAAAGCCCGACAGCTGGAGGATGACCTACTC
GCTGGGGCTAAGCAAGAAGCGATCGACCAACTCTCGGCTGAAACCAACAA
GACCACGGCGGCATCGTCACATGCCGAGACTCTCCAGCAACAACTGCAAA
CCCTCCAAGAGCGACTCCGTGCCGCCCGAACCCAGGAGCGCCTTCAACAA
CAGAAGGCCGACGCCGCAGCTTCGAAGGTGGAAACGGCAACACTCGACCT
CGACAAATTCCGTCACCCAGATGCGGCCTCTTCCCGCAAACGCACGAAGA
AGGGGAAGAGCGTCAAAGCGGAGGTCGCATCTACACCTTCATCGCCGGGC
GGAGCTGAGTCGGACACACCGTACACGGTGCATCTCAAGGCCACGGCGAG
CCACACCGTACAGGGCGCCAAAACCATCACCGTTTCTGAGGCGGACGACC
ACTTCATCGAGGCTCTCCTAGAAGATGTAGCGCATTTCGGCATCATCGGC
TGCTCGTCTCCCAACAACCAGGCCCTGCAACCCCTGGCGCGCGCACTGTG
CGATCTCCTACCCCCGGCGATCCAGCCCTGCGGAACGGTGGCGCAAGCAG
TCAGTTTCCTTCGCGACATCATGGCGGACGGGAAGGATCGCCGGCTCATC
ATCGACATGTCCCAGGCGCTGGATGCTCTACTCACCCAGCTCCGGTCTGC
GTACGCCAATCGCGAATCCACTCTTTTGCTGCTGGGCGACAGCTACTACC
AGCAAATCAAGGAAAAAATCATCAACAAACAAGCTGCAGCATCTGGCCGT
CAATCGGGTTACACCTCGTCTTCGTCATTTGAACGGCCCAGGGAACAAGT
GCGCCGCCAACAACAACGGGAGCGCCGCCAGGAGCGCTACTCGTCGCCGC
CACGCCACGGCAAACACGAAGACGCGGGCCGCCGCCGACACCATCCGCCT
GCTTCCTCGTCCTCTGACACAAGGCGTCCGCGGGCCGCAGCGTCGTCATC
GCACTCGTCAACAAAG back to top
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