mRNA_L-elsbetiae_contig10354.386.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10354.386.1
Unique NamemRNA_L-elsbetiae_contig10354.386.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Match: A0A2R6W541_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W541_MARPO)

HSP 1 Score: 97.4 bits (241), Expect = 8.680e-20
Identity = 62/206 (30.10%), Postives = 101/206 (49.03%), Query Frame = 1 
Query:  265 PTGITTPWTAEEDDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERLGRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWSCISAKLVGRDALDCQQRFLD-----LQQGPWQDEELVTLLHAENSLRSRWSEIAETLPGRSVNAIKSILRNSARFKDYKGFNSGISPETSTGWL 867
            P   +T WTAEED+ LRA VE+     W ++A                      A  P     R+  QC HRW++ L P+ ++    W++ ED  ++  V      G  RW+ I+  + GR++  C++R+ +     +++ PW +EE + L+ A   L +RW+EIA+ +PGRS NAIK+      R+   K   S    ++S  W+
Sbjct:   52 PRKPSTSWTAEEDETLRAAVEKFKGRNWKQIA----------------------ASLP----NRSDAQCLHRWQKVLNPILVK--GYWSKEEDDKMLELVKTF---GTKRWAAIARAMPGRNSKQCRERWCNHLDPKIKKEPWSEEEDMMLVMAHQRLGNRWAEIAKIIPGRSDNAIKN------RWNTAKNKRSDALEQSSENWI 220
[Close]
BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Match: A0A6P3WAS8_CLUHA (v-myb avian myeloblastosis viral oncogene homolog-like 2b isoform X2 n=4 Tax=Clupeidae TaxID=55118 RepID=A0A6P3WAS8_CLUHA)

HSP 1 Score: 97.1 bits (240), Expect = 1.050e-18
Identity = 59/210 (28.10%), Postives = 108/210 (51.43%), Query Frame = 1 
Query:  226 CKNSGRTVADRLTPTGITTPWTAEEDDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERLGRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWSCISAKLVGRDALDCQQRFL-----DLQQGPWQDEELVTLLHAENSLRSRWSEIAETLPGRSVNAIKSILRNSARFKDYKGFNSGI 840
            C+++   VA++     +   WT EEDD+LRA+V+++G   W R+A       ++L                     RT  QC+HRW + L P  ++    W + ED+ ++  V ++   G  +W+ ++  L GR    C++R+      D+++  W  EE + +  A + L +RW+EIA+ LPGR+ NA+K+   ++ + K   G+ +G+
Sbjct:   15 CQDTDSDVAEQRDCGKVKVKWTQEEDDNLRALVQKLGPNDWKRIA-------SYLPS-------------------RTEHQCQHRWFKVLDPDLVK--GPWTKEEDEKVIELVKKY---GNKQWAMVAKHLKGRLGKQCRERWHNHLNPDVKKSSWTSEEDLVIYKAHSVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKVEMGYYTGV 193
[Close]
BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Match: A0A7S3GCM0_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GCM0_9EUKA)

HSP 1 Score: 93.2 bits (230), Expect = 6.470e-18
Identity = 58/186 (31.18%), Postives = 94/186 (50.54%), Query Frame = 1 
Query:  283 PWTAEEDDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERLGRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWSCISAKLVGRDALDCQQRF---LD--LQQGPWQDEELVTLLHAENSLRSRWSEIAETLPGRSVNAIKSILRNSARFKDYKG 825
            PW+ EEDD L+ +VE      W ++A  F+                           R+  QC HRW++ L P  ++    W   ED+ L + V E+   G  +W+ ++  L GR+   C++R+   LD  +++ PW +EE   LL A + L ++W+EIA+ LPGR+ NAIK+   ++ R +  KG
Sbjct:   77 PWSQEEDDKLKQVVELYNRKNWKKIASFFD--------------------------SRSDVQCFHRWQKVLNPDLVK--GPWTTAEDERLKSLVKEY---GDKKWADVARNLPGRNGKQCRERWHNHLDPNIKREPWTEEENSKLLEAHSRLGNKWAEIAKLLPGRTDNAIKNHWNSTVRRRAQKG 231
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BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Match: A0A7S3GCM2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GCM2_9EUKA)

HSP 1 Score: 93.2 bits (230), Expect = 1.980e-17
Identity = 58/186 (31.18%), Postives = 94/186 (50.54%), Query Frame = 1 
Query:  283 PWTAEEDDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERLGRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWSCISAKLVGRDALDCQQRF---LD--LQQGPWQDEELVTLLHAENSLRSRWSEIAETLPGRSVNAIKSILRNSARFKDYKG 825
            PW+ EEDD L+ +VE      W ++A  F+                           R+  QC HRW++ L P  ++    W   ED+ L + V E+   G  +W+ ++  L GR+   C++R+   LD  +++ PW +EE   LL A + L ++W+EIA+ LPGR+ NAIK+   ++ R +  KG
Sbjct:   77 PWSQEEDDKLKQVVELYNRKNWKKIASFFD--------------------------SRSDVQCFHRWQKVLNPDLVK--GPWTTAEDERLKSLVKEY---GDKKWADVARNLPGRNGKQCRERWHNHLDPNIKREPWTEEENSKLLEAHSRLGNKWAEIAKLLPGRTDNAIKNHWNSTVRRRAQKG 231
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BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Match: A0A8C5CA97_GADMO (V-myb avian myeloblastosis viral oncogene homolog-like 2b n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5CA97_GADMO)

HSP 1 Score: 88.6 bits (218), Expect = 5.940e-16
Identity = 56/209 (26.79%), Postives = 103/209 (49.28%), Query Frame = 1 
Query:  226 CKNSGRTVADRLTPTGITTPWTAEEDDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERLGRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWSCISAKLVGRDALDCQQRFL-----DLQQGPWQDEELVTLLHAENSLRSRWSEIAETLPGRSVNAIKSILRNSARFKDYKGFNSG 837
            C+++   VA+      +   WT EEDD+L+A+V+++G   W  +++    H                          T  QC+HRW + L P  ++    W + ED+ ++  V ++   G  +W+ ++ +L GR    C++R+      D+++  W  EE + +  A   L +RW+EIA+ LPGR+ NA+K+   ++ + K   GF +G
Sbjct:   15 CQDTESDVAEAKDCGKVKVKWTQEEDDNLKALVQKVGPADWKCISNFIPNH--------------------------TEQQCQHRWFKVLDPDLVK--GPWTKEEDEKVIELVHQY---GNKQWALVAKQLKGRLGKQCRERWHNHLNPDVKKSSWMAEEDLIIYKAHCVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKLEMGFFAG 192
[Close]
BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Match: A0A8C5A8B8_GADMO (V-myb avian myeloblastosis viral oncogene homolog-like 2b n=4 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5A8B8_GADMO)

HSP 1 Score: 88.6 bits (218), Expect = 7.340e-16
Identity = 56/209 (26.79%), Postives = 103/209 (49.28%), Query Frame = 1 
Query:  226 CKNSGRTVADRLTPTGITTPWTAEEDDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERLGRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWSCISAKLVGRDALDCQQRFL-----DLQQGPWQDEELVTLLHAENSLRSRWSEIAETLPGRSVNAIKSILRNSARFKDYKGFNSG 837
            C+++   VA+      +   WT EEDD+L+A+V+++G   W  +++    H                          T  QC+HRW + L P  ++    W + ED+ ++  V ++   G  +W+ ++ +L GR    C++R+      D+++  W  EE + +  A   L +RW+EIA+ LPGR+ NA+K+   ++ + K   GF +G
Sbjct:   15 CQDTESDVAEAKDCGKVKVKWTQEEDDNLKALVQKVGPADWKCISNFIPNH--------------------------TEQQCQHRWFKVLDPDLVK--GPWTKEEDEKVIELVHQY---GNKQWALVAKQLKGRLGKQCRERWHNHLNPDVKKSSWMAEEDLIIYKAHCVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKLEMGFFAG 192
[Close]
BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Match: A0A6I9Q2W9_9TELE (myb-related protein B n=2 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9Q2W9_9TELE)

HSP 1 Score: 84.7 bits (208), Expect = 1.000e-15
Identity = 55/202 (27.23%), Postives = 100/202 (49.50%), Query Frame = 1 
Query:  247 VADRLTPTGITTPWTAEEDDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERLGRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWSCISAKLVGRDALDCQQRFLD-----LQQGPWQDEELVTLLHAENSLRSRWSEIAETLPGRSVNAIKSILRNSARFKDYKGFNSG 837
            +A+R     +   WT EEDD L+A+V+++G   W ++A++   H                  +P         QC+HRW + L P  ++    W + ED+ ++  V  +   G  +W+ ++  L GR    C++R+ +     +++  W  EE + +  A   L +RW+EIA+ LPGR+ NA+K+   ++ + K   GF +G
Sbjct:   22 MAERGDGGKVKVKWTQEEDDKLKALVQKLGTNDWKQIANNIPNH-----------------SEP---------QCQHRWFKVLDPGLVK--GPWTKEEDEKVIELVNLY---GNKQWATVAKHLKGRLGKQCRERWHNHLNPNVKKSSWTAEEDLIIYKAHCLLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKLEMGFYAG 192
[Close]
BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Match: A0A672YWH6_9TELE (V-myb avian myeloblastosis viral oncogene homolog-like 2b n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672YWH6_9TELE)

HSP 1 Score: 85.9 bits (211), Expect = 5.990e-15
Identity = 55/202 (27.23%), Postives = 97/202 (48.02%), Query Frame = 1 
Query:  247 VADRLTPTGITTPWTAEEDDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERLGRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWSCISAKLVGRDALDCQQRFLD-----LQQGPWQDEELVTLLHAENSLRSRWSEIAETLPGRSVNAIKSILRNSARFKDYKGFNSG 837
            VA++     +   WT EEDD L+A+V+++G   W  +A     H                          T  QC+HRW + L P  ++    W + ED+ ++  V  +   G  +W+ ++  L GR    C++R+ +     +++  W  EE + +  A + L +RW+EIA+ LPGR+ NA+K+   ++ + K   GF +G
Sbjct:   21 VAEQREGGKVKVKWTQEEDDKLKALVQKLGMNDWKNIASYIPNH--------------------------TEHQCQHRWFKVLDPELVK--GPWTKEEDEKVIELVNLY---GNKQWAVVAKHLKGRLGKQCRERWHNHLNPNVKKSSWTAEEDLIIYKAHSLLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKLEMGFYAG 191
[Close]
BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Match: UPI00148FFA45 (v-myb avian myeloblastosis viral oncogene homolog-like 2b n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148FFA45)

HSP 1 Score: 85.5 bits (210), Expect = 8.240e-15
Identity = 57/202 (28.22%), Postives = 96/202 (47.52%), Query Frame = 1 
Query:  247 VADRLTPTGITTPWTAEEDDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERLGRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWSCISAKLVGRDALDCQQRFLD-----LQQGPWQDEELVTLLHAENSLRSRWSEIAETLPGRSVNAIKSILRNSARFKDYKGFNSG 837
            VAD      +   WT EEDD L+A+V+R+G   W  VA+    H                          T  QC+HRW + L P  ++    W + ED+ ++  V  +   G  +W+ ++  L GR    C++R+ +     +++  W  EE + +  A   + +RW+EIA+ LPGR+ NA+K+   ++ + K   GF +G
Sbjct:   22 VADPRDGGKVKVKWTPEEDDKLKALVQRLGTTDWKHVANYIPSH--------------------------TEHQCQHRWFKVLDPELVK--GPWTKEEDEKVIELVNLY---GNKQWALVAKHLKGRLGKQCRERWHNHLNPNVKKSSWTAEEDLIIYKAHCMVGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKLEMGFYAG 192
[Close]
BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Match: A0A665WJP2_ECHNA (V-myb avian myeloblastosis viral oncogene homolog-like 2b n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665WJP2_ECHNA)

HSP 1 Score: 85.1 bits (209), Expect = 8.410e-15
Identity = 54/202 (26.73%), Postives = 97/202 (48.02%), Query Frame = 1 
Query:  247 VADRLTPTGITTPWTAEEDDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERLGRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWSCISAKLVGRDALDCQQRFLD-----LQQGPWQDEELVTLLHAENSLRSRWSEIAETLPGRSVNAIKSILRNSARFKDYKGFNSG 837
            VA++     +   WT EEDD L+A+V+++G   W  +A     H                          T  QC+HRW + L P  ++   +W + ED+ ++  V  +   G  +W+ ++  L GR    C++R+ +     +++  W  EE + +  A   + +RW+EIA+ LPGR+ NA+K+   ++ + K   GF +G
Sbjct:   22 VAEQRDGGKVKVKWTQEEDDKLKALVQKLGPNDWKYIASHIPNH--------------------------TELQCQHRWFKVLDPELVK--GSWTKEEDEKVIELVNMY---GNKQWAMVAKHLKGRLGKQCRERWHNHLNPNVKKSSWTAEEDLIIYKAHCLVGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKLEMGFYAG 192
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10354.386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R6W541_MARPO8.680e-2030.10Uncharacterized protein n=3 Tax=Marchantia polymor... [more]
A0A6P3WAS8_CLUHA1.050e-1828.10v-myb avian myeloblastosis viral oncogene homolog-... [more]
A0A7S3GCM0_9EUKA6.470e-1831.18Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7S3GCM2_9EUKA1.980e-1731.18Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A8C5CA97_GADMO5.940e-1626.79V-myb avian myeloblastosis viral oncogene homolog-... [more]
A0A8C5A8B8_GADMO7.340e-1626.79V-myb avian myeloblastosis viral oncogene homolog-... [more]
A0A6I9Q2W9_9TELE1.000e-1527.23myb-related protein B n=2 Tax=Notothenioidei TaxID... [more]
A0A672YWH6_9TELE5.990e-1527.23V-myb avian myeloblastosis viral oncogene homolog-... [more]
UPI00148FFA458.240e-1528.22v-myb avian myeloblastosis viral oncogene homolog-... [more]
A0A665WJP2_ECHNA8.410e-1526.73V-myb avian myeloblastosis viral oncogene homolog-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10354contigL-elsbetiae_contig10354:2923..6358 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score104.8
Seed ortholog evalue7.6e-20
Seed eggNOG ortholog2880.D8LKF8
KEGG koko:K20290
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RNA polymerase II transcription regulator recruiting activity
EggNOG OGsCOG5147@1,KOG0048@2759
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons7
Model size939
Cds size936
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815262.8431027-CDS-L-elsbetiae_contig10354:2922..31081622815262.8431027-CDS-L-elsbetiae_contig10354:2922..3108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 2923..3108 +
1691682803.9946566-CDS-L-elsbetiae_contig10354:2922..31081691682803.9946566-CDS-L-elsbetiae_contig10354:2922..3108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 2923..3108 +
1622815262.856527-CDS-L-elsbetiae_contig10354:3511..36171622815262.856527-CDS-L-elsbetiae_contig10354:3511..3617Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 3512..3617 +
1691682804.006204-CDS-L-elsbetiae_contig10354:3511..36171691682804.006204-CDS-L-elsbetiae_contig10354:3511..3617Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 3512..3617 +
1622815262.8685703-CDS-L-elsbetiae_contig10354:4441..46281622815262.8685703-CDS-L-elsbetiae_contig10354:4441..4628Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 4442..4628 +
1691682804.0144246-CDS-L-elsbetiae_contig10354:4441..46281691682804.0144246-CDS-L-elsbetiae_contig10354:4441..4628Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 4442..4628 +
1622815262.8796756-CDS-L-elsbetiae_contig10354:4961..50671622815262.8796756-CDS-L-elsbetiae_contig10354:4961..5067Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 4962..5067 +
1691682804.0225852-CDS-L-elsbetiae_contig10354:4961..50671691682804.0225852-CDS-L-elsbetiae_contig10354:4961..5067Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 4962..5067 +
1622815262.890377-CDS-L-elsbetiae_contig10354:5353..54821622815262.890377-CDS-L-elsbetiae_contig10354:5353..5482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 5354..5482 +
1691682804.0314357-CDS-L-elsbetiae_contig10354:5353..54821691682804.0314357-CDS-L-elsbetiae_contig10354:5353..5482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 5354..5482 +
1622815262.899888-CDS-L-elsbetiae_contig10354:5840..60411622815262.899888-CDS-L-elsbetiae_contig10354:5840..6041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 5841..6041 +
1691682804.0408182-CDS-L-elsbetiae_contig10354:5840..60411691682804.0408182-CDS-L-elsbetiae_contig10354:5840..6041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 5841..6041 +
1622815262.9115665-CDS-L-elsbetiae_contig10354:6336..63571622815262.9115665-CDS-L-elsbetiae_contig10354:6336..6357Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 6337..6357 +
1691682804.0504563-CDS-L-elsbetiae_contig10354:6336..63571691682804.0504563-CDS-L-elsbetiae_contig10354:6336..6357Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10354 6337..6357 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10354.386.1prot_L-elsbetiae_contig10354.386.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10354 2923..6357 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10354.386.1

>prot_L-elsbetiae_contig10354.386.1 ID=prot_L-elsbetiae_contig10354.386.1|Name=mRNA_L-elsbetiae_contig10354.386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp
PTATSRRAQGHSAIGQPRTPAAGASGTATGLPWSTTAAPQQEGSMYTARA
QSARTSEEGGQQGLDDDGMLLSGSGCKNSGRTVADRLTPTGITTPWTAEE
DDHLRAIVERMGAGYWSRVADDFNGHMAFLCEGPQLDAQKSSAGQPCERL
GRTSCQCRHRWKEALAPLSIEEMDTWNEREDQALMAAVAEHPQDGVSRWS
CISAKLVGRDALDCQQRFLDLQQGPWQDEELVTLLHAENSLRSRWSEIAE
TLPGRSVNAIKSILRNSARFKDYKGFNSGISPETSTGWLTVLLDKRAAAE
PDTKHMSSKSLQ
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mRNA from alignment at L-elsbetiae_contig10354:2923..6358+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10354.386.1 ID=mRNA_L-elsbetiae_contig10354.386.1|Name=mRNA_L-elsbetiae_contig10354.386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3436bp|location=Sequence derived from alignment at L-elsbetiae_contig10354:2923..6358+ (Laminarionema elsbetiae ELsaHSoW15)
CCAACAGCAACTTCCCGTCGAGCTCAAGGTCATTCGGCCATCGGCCAGCC
GCGAACGCCAGCAGCTGGCGCCTCAGGAACGGCCACCGGTCTTCCGTGGT
CAACAACAGCAGCTCCGCAGCAGGAGGGCTCCATGTACACCGCGCGGGCA
CAGAGCGCGCGTACCTCGGAGGAGGGGGGCCAGCAGGTTAGTTCGAGGCT
GCAGCTTCTCGTGGGGACAAACAATCACTCCAGTACCTGTCTTAAATAGC
GTGCGTAGGTGTAGGATCGGCCGTTCCACACCCTTTCGGGCTCATGCGGG
TCCTGGCTGATGGGACCTATATGGCTCGACTCCAGACTGAGCCGCGCGCA
CTTTTGTTGCCCACATGCGGCGCGCTTCGCAAGTTTTTTCGGGATATGCC
GTAGATACACGCCATTTTTTTGCATTGTACACCCGAAGTTGGAACGAAGA
GTGCGGCGGGGGCGAAATCTGGACACCTACATACCTGACACAAGCCAAGT
CGACGGAGGGAAAATTGCCTGATGTGTGCGTGTCAGGGAACCCATGCCGC
CGGGCCCCCTTCCTCCTGCCCCACGTCCTGTTGCTGCAGGGGCTGGACGA
CGACGGTATGCTGCTTTCGGGCAGCGGCTGCAAGAACAGCGGCAGGACAG
TCGCGGACCGTCTCACCCCGACCGGGATAACGACACCGTGGACGGGTGAG
AGAGCACGGGAGGACGACGATCCAATCGCAATCAGTCGCAGTCACTGAAA
TGGAAGGGCATTCGTTTGCTAAAGGGGAGACGGTTTATTTGTGTTTCCGT
CTTTTCCTGAGGAAAATGCAACAGGGGGGCGTGCATAGCCGGTGCTGATG
TTGTTTGCGTGACGAGCACCGGCTCGCCCATGACCAGACGGTGTCTCCGA
GATATGCAGAGCACAAGGAGATACCCCAAGTCATACCAGGTACTTCGTGA
TATCATGCAACGTTTCTATTTAGGCTTAAGATGGCGACGTAAATATTATG
TTTACATCAGATGAAATGGACGGCTAGCTACCTGAATCACTGTGACCTCC
CTACTCGTGCCAGTAGAGGCATGAACCCCGCCTCAAAACCCGTGAGGACT
GACAGATTGTCCCGGCCACGCGGATGCGACCGAGTCGAACCACCATTATA
GGGTGGATTCGCGCCTGTCGCTCTTTTTGCACGGTGGCTTGGGCGTCGTA
TGTATGCAGCCACGCCAACAGCACCCGACACCCCCGACCACACCCGGACG
GTAGCACTGCAACAAGCACGAACAAAAGCGCTTATTGGCAGAGCATGAGC
GGGCGTGAAATCAGGAAAGATAGAACAGCGTTTTCTCAACTAAAGCTCGA
TCGGCTCCTTCGCCGATCACCGCCCATTCACGACGGCTGGGTGTTTCCTG
ACCTACAAACATGCTTCTGCATGCCTACGCTGTTGTCTTCACATAAAAAT
AAAAACGTTCCAATCTCTCTATCTAACACAACTCCACATACATTCACACA
TATATACATATATGCGCAGCGGAAGAAGACGATCATCTACGCGCGATCGT
GGAGCGAATGGGCGCCGGGTACTGGTCCCGCGTAGCCGACGACTTCAACG
GCCACATGGCGTTCTTGTGCGAGGGCCCCCAGCTCGACGCTCAGAAGTCG
TCTGCCGGCCAACCTTGTGAACGACTGGGCAGGACCAGCTGTCAGTGCAG
ACACAGGTGGGCGACGTTTGTTTGTAGACTGGCTGACCAGACTTGTCCAA
GCGGTGTTTCCACTGCCTCTTGACAGTTATTTTAATCAATGCATACAAAT
GTTAGCAGTCTACGTCCCGTCTGAAAAAAGTCGTTCCGGAGGGACTGTTG
TAGGCATATCTACATATTGTACTAACCCCCCTTTTAACCCGAGGTGTTTT
AGGCTCCCACAATGTGTTTGTTGCACCGCATTTTCTTCGGCCTCGGGGTT
AAAAAAAAGTAGGCATGTTGCGTATTTATCTCCTCCGGATTCGTTTGACA
TGTTCGGTTTTTTGGTTCAAACTTTGTTCCCCTCCCAAGGTGGAAGGAAG
CGTTAGCGCCGCTATCGATAGAGGAGATGGACACCTGGAACGAGCGTGAG
GACCAGGCGTTGATGGCCGCCGTCGCAGAGCACCCACAAGACGGGGTGAG
GTTTCAGCGCCGCTCGAGTGAGCACCGATAGCCCCCCCCCCGCCGATAAT
TATTTAAACGTTGGACTCGAGCAGATATCTAGCCATGCCTTCTTGCAGGC
TAGACTACATATCTCCCGCTTTGATGCACGTACATACATACATAGATACA
CAGCAGTTGTGCCTAAACATCGCGCCACCGTGGAGCCCGTGAGCACGAGA
TCATCGGGGTGCAGCTTAGTTAATTAAAACGAGTGCGTTGTTGTTCCTGT
CGCCGTGTGCCCTTCCTTGATCGACCGGCAGGTTTCTCGTTGGAGCTGCA
TCTCTGCCAAGCTGGTGGGAAGAGACGCGCTCGACTGCCAGCAGCGCTTC
TTGGACCTTCAGCAGGGCCCATGGCAAGACGAGGAGCTGGTAACTCTTCT
GCACGCGGAGGTGAGGCAAATGTATTATACTGCACACAGCCGGCGGCTAT
AAGGAGAGGAATGGAGCGTAACACGGACGCCCGCGGGCCGGAAACGATGA
ACATACCTAACTCGAGGTTGACGACGGTTTTGCTGGCGTTAGATAGATGC
GCAGCTATGTAGCTCGTGGCCATTTGAACTCTGCACAATTTTTTTGTGTG
CATCCAACGACAGCAGGGCACGCCCGACCTCCGTAGTAAAGCCCTGCAAG
TTTTGTTTCATGCCCATGATCGGCGTCTGGATGCCTACCTGAACGAGGCG
AAAGCACCGTACAACCACAAGACCTTGGTTGATGGACGAATCGTGACGCA
ATATGTATCTACGTACAGAATTCGCTACGCTCTCGCTGGTCGGAAATCGC
CGAGACTCTACCCGGCCGCAGCGTCAACGCCATCAAGAGCATCCTCCGAA
ATTCGGCACGGTTCAAAGACTACAAGGGATTCAACAGCGGGATCTCTCCT
GAAACATCGACAGGGTGGCTCACCGTCCTGCTAGACAAGCGGGCGGCAGC
TGAACCGGACACGAAACACGTAAGAGTTGGCCGTGGAACCTCTTGGGCAT
TGAAAATCGCACTTACACACATAGCATGCGGCATTATTCGTTGTGTTAGA
TCACATGTGTAGCCTGCTATCTACCATGGGCCTCCCCCTACCGCTGTGCC
CAACGCCGCTATGGCGAATTGGGAAACGGCATATGAAGCTTTGTCGCCTT
CTCCTCTATAAATCGCTCCCATCATGCACCGTCTACGAGCGCTCCACGTA
CACGCCAATTTTCTGTACACAGGCCGAACAGGCTAGCCCGTTTGTTTTGT
CGCCCACTCTGCAGATGTCGTCAAAATCGCTCCAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10354:2923..6358+

>mRNA_L-elsbetiae_contig10354.386.1 ID=mRNA_L-elsbetiae_contig10354.386.1|Name=mRNA_L-elsbetiae_contig10354.386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1872bp|location=Sequence derived from alignment at L-elsbetiae_contig10354:2923..6358+ (Laminarionema elsbetiae ELsaHSoW15)
CCAACAGCAACTTCCCGTCGAGCTCAAGGTCATTCGGCCATCGGCCAGCC
GCGAACGCCAGCAGCTGGCGCCTCAGGAACGGCCACCGGTCTTCCGTGGT
CAACAACAGCAGCTCCGCAGCAGGAGGGCTCCATGTACACCGCGCGGGCA
CAGAGCGCGCGTACCTCGGAGGAGGGGGGCCAGCAGCCAACAGCAACTTC
CCGTCGAGCTCAAGGTCATTCGGCCATCGGCCAGCCGCGAACGCCAGCAG
CTGGCGCCTCAGGAACGGCCACCGGTCTTCCGTGGTCAACAACAGCAGCT
CCGCAGCAGGAGGGCTCCATGTACACCGCGCGGGCACAGAGCGCGCGTAC
CTCGGAGGAGGGGGGCCAGCAGGGGCTGGACGACGACGGTATGCTGCTTT
CGGGCAGCGGCTGCAAGAACAGCGGCAGGACAGTCGCGGACCGTCTCACC
CCGACCGGGATAACGACACCGTGGACGGGGGCTGGACGACGACGGTATGC
TGCTTTCGGGCAGCGGCTGCAAGAACAGCGGCAGGACAGTCGCGGACCGT
CTCACCCCGACCGGGATAACGACACCGTGGACGGCGGAAGAAGACGATCA
TCTACGCGCGATCGTGGAGCGAATGGGCGCCGGGTACTGGTCCCGCGTAG
CCGACGACTTCAACGGCCACATGGCGTTCTTGTGCGAGGGCCCCCAGCTC
GACGCTCAGAAGTCGTCTGCCGGCCAACCTTGTGAACGACTGGGCAGGAC
CAGCTGTCAGTGCAGACACAGCGGAAGAAGACGATCATCTACGCGCGATC
GTGGAGCGAATGGGCGCCGGGTACTGGTCCCGCGTAGCCGACGACTTCAA
CGGCCACATGGCGTTCTTGTGCGAGGGCCCCCAGCTCGACGCTCAGAAGT
CGTCTGCCGGCCAACCTTGTGAACGACTGGGCAGGACCAGCTGTCAGTGC
AGACACAGGTGGAAGGAAGCGTTAGCGCCGCTATCGATAGAGGAGATGGA
CACCTGGAACGAGCGTGAGGACCAGGCGTTGATGGCCGCCGTCGCAGAGC
ACCCACAAGACGGGGTGGAAGGAAGCGTTAGCGCCGCTATCGATAGAGGA
GATGGACACCTGGAACGAGCGTGAGGACCAGGCGTTGATGGCCGCCGTCG
CAGAGCACCCACAAGACGGGGTTTCTCGTTGGAGCTGCATCTCTGCCAAG
CTGGTGGGAAGAGACGCGCTCGACTGCCAGCAGCGCTTCTTGGACCTTCA
GCAGGGCCCATGGCAAGACGAGGAGCTGGTAACTCTTCTGCACGCGGAGG
TTTCTCGTTGGAGCTGCATCTCTGCCAAGCTGGTGGGAAGAGACGCGCTC
GACTGCCAGCAGCGCTTCTTGGACCTTCAGCAGGGCCCATGGCAAGACGA
GGAGCTGGTAACTCTTCTGCACGCGGAGAATTCGCTACGCTCTCGCTGGT
CGGAAATCGCCGAGACTCTACCCGGCCGCAGCGTCAACGCCATCAAGAGC
ATCCTCCGAAATTCGGCACGGTTCAAAGACTACAAGGGATTCAACAGCGG
GATCTCTCCTGAAACATCGACAGGGTGGCTCACCGTCCTGCTAGACAAGC
GGGCGGCAGCTGAACCGGACACGAAACACAATTCGCTACGCTCTCGCTGG
TCGGAAATCGCCGAGACTCTACCCGGCCGCAGCGTCAACGCCATCAAGAG
CATCCTCCGAAATTCGGCACGGTTCAAAGACTACAAGGGATTCAACAGCG
GGATCTCTCCTGAAACATCGACAGGGTGGCTCACCGTCCTGCTAGACAAG
CGGGCGGCAGCTGAACCGGACACGAAACACATGTCGTCAAAATCGCTCCA
GATGTCGTCAAAATCGCTCCAG
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