mRNA_L-elsbetiae_contig1035.381.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Match: D7G2K6_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K6_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 8.500e-125 Identity = 188/205 (91.71%), Postives = 194/205 (94.63%), Query Frame = 1 Query: 1195 LYPGLRPLWEMPPLYVVDDFFTAPECDALMALASNYMVASPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMTLTGKPFEHLELPQVGRYYTSQKYANHWDAFDLSTEDGRRFAQNGGQRVCTVLVYLNDVASGGCTAFPQLGMKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARIPAI 1809 LYPGLR L E PPLYVVDDFF+ PECDAL+ALA NYM+ SPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVM LTGKP EHLELPQVGRYYTSQKYANHWDAFDL+TEDGRRFAQNGGQRVCTVLVYLNDV SGGCTAFPQLGMKVQP+KGMAVVFFPATLDGVLDSRLLHAAEPA+DTKWVSQIWIRQG Y GTPTARIPAI Sbjct: 90 LYPGLRNLRETPPLYVVDDFFSGPECDALIALAGNYMIVSPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVPSGGCTAFPQLGMKVQPRKGMAVVFFPATLDGVLDSRLLHAAEPAIDTKWVSQIWIRQGAYHGTPTARIPAI 294
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Match: A0A8J2S9J3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J3_9STRA) HSP 1 Score: 278 bits (712), Expect = 2.210e-83 Identity = 137/215 (63.72%), Postives = 161/215 (74.88%), Query Frame = 1 Query: 1165 PAHSFLQLNPLYPGLRPLWEMPPLYVVDDFFTAPECDALMALASNYMVASPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMTLTGKPFEHLELPQVGRYYTSQKYANHWDAFDLSTEDGRRFAQNGGQRVCTVLVYLNDVASGGCTAFPQLGMKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARIPAI 1809 P +L LNP YPGL + PP++ V F + ECD L+ A +M +PVVGAG GEVS SRTSS+C+LAREDLPT+C KV LTG P EHLELPQVGRY + Y H+DAFD S+ DGRRFAQNGGQRV TVLVYLNDVA GGCT+F +LG+ +QPKKG A+VFFPA+LDG+LD LHAAEPA+D KWVSQIWIRQ Y+G + RI I Sbjct: 27 PPRQYLPLNPAYPGLTAVHTDPPVFTVAIFLSEAECDDLINSAQGHMTPAPVVGAGNGEVSVSRTSSTCYLAREDLPTICTKVCALTGCPVEHLELPQVGRYRGGEFYKAHYDAFDTSSPDGRRFAQNGGQRVATVLVYLNDVARGGCTSFSKLGLSIQPKKGTALVFFPASLDGMLDQHYLHAAEPALDLKWVSQIWIRQKAYNGLASVRIAPI 241
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Match: A0A835YJM0_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJM0_9STRA) HSP 1 Score: 269 bits (687), Expect = 3.910e-80 Identity = 129/199 (64.82%), Postives = 153/199 (76.88%), Query Frame = 1 Query: 1204 GLRPLWEMPPLYVVDDFFTAPECDALMALASNYMVASPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMTLTGKPFEHLELPQVGRYYTSQKYANHWDAFDLSTEDGRRFAQNGGQRVCTVLVYLNDVASGGCTAFPQLGMKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARI 1800 G+R L PP YVV+ F + EC+ L+ A +M SPVVG G GE+S SRTS+SC+ AREDLP++CHKV LTGKP +HLELPQVGRY +Q YA H DAFDL T+DG RFAQNGGQRV TVL+YLNDV GG T+FP+LG+ V P++GMAVVFFP+TLDG D LH AEPAVD K+VSQIWIRQG Y+G PT R+ Sbjct: 16 GVRQLHGHPPFYVVEGFLSTQECEGLIRQADGFMCTSPVVGKGNGEISPSRTSTSCYFAREDLPSICHKVCMLTGKPADHLELPQVGRYLPTQFYAPHLDAFDLKTQDGMRFAQNGGQRVATVLIYLNDVPRGGNTSFPRLGLSVTPRRGMAVVFFPSTLDGCADELALHTAEPAVDVKYVSQIWIRQGLYTGEPTRRL 214
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Match: A0A7S1UYE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYE3_9STRA) HSP 1 Score: 276 bits (705), Expect = 4.140e-80 Identity = 134/206 (65.05%), Postives = 157/206 (76.21%), Query Frame = 1 Query: 1186 LNPLYPGLRPLWEMPPLYVVDDFFTAPECDALMALASNYMVASPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMTLTGKPFEHLELPQVGRYYTSQKYANHWDAFDLSTEDGRRFAQNGGQRVCTVLVYLNDVASGGCTAFPQLGMKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARIP 1803 +NP YPGLR L PP++ VD+F + EC LM +A + +PVVG GAGEVS SRTSS+C+LAREDLP KV LTGKP EH ELPQVGRY+ SQ+Y H+DAFDLS EDGRRFA NGGQR TVLVYLNDV GG T+FP L + VQP++GMA+VFFPAT+DG LD LHAA PAVDTK+VSQ+WIRQG Y G P+ R+P Sbjct: 180 VNPHYPGLRLLNATPPIFAVDNFLSPFECQFLMEVAQDSFGPAPVVGKGAGEVSPSRTSSTCYLAREDLPDYLRKVSLLTGKPIEHCELPQVGRYFPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVHQGGATSFPALNLDVQPRRGMAIVFFPATVDGYLDKMALHAANPAVDTKYVSQVWIRQGEYKGQPSKRLP 385
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Match: A0A7S3KY14_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KY14_9STRA) HSP 1 Score: 272 bits (695), Expect = 2.560e-78 Identity = 130/207 (62.80%), Postives = 159/207 (76.81%), Query Frame = 1 Query: 1186 LNPLYPGLRPLWEMPPLYVVDDFFTAPECDALMALASNYMVASPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMTLTGKPFEHLELPQVGRYYTSQKYANHWDAFDLSTEDGRRFAQNGGQRVCTVLVYLNDVASGGCTAFPQLGMKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARIPA 1806 +NP YPGLR L PP++ V++F + ECD L+ A + +PVVG G+GE+S SRTSS+C+LAREDLP + KV LTGKP +H ELPQVGRY SQ+Y H+DAFDLSTEDGRRFA NGGQR TVL+YLNDV GG T FP L + VQP +GMA++FFPAT+DG+LD LHAA PAVDTK+VSQ+WIRQG Y+G P+ R+PA Sbjct: 190 VNPHYPGLRVLHNSPPVFCVENFLSPHECDFLINAAHDSFGPAPVVGKGSGEISPSRTSSTCYLAREDLPDLMRKVTLLTGKPIDHCELPQVGRYMASQQYLQHYDAFDLSTEDGRRFASNGGQRTITVLIYLNDVHQGGATRFPALNLDVQPVRGMALIFFPATIDGMLDQMSLHAALPAVDTKYVSQVWIRQGSYNGQPSKRLPA 396
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Match: A0A1Z5JHE4_FISSO (P4Hc domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHE4_FISSO) HSP 1 Score: 263 bits (673), Expect = 1.430e-77 Identity = 127/205 (61.95%), Postives = 157/205 (76.59%), Query Frame = 1 Query: 1186 LNPLYPGLRPLWEMPPLYVVDDFFTAPECDALMALASNYMVASPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMTLTGKPFEHLELPQVGRYYTSQKYANHWDAFDLSTEDGRRFAQNGGQRVCTVLVYLNDVASGGCTAFPQLGMKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARI 1800 +NP YPGLR L PP++ V++F T ECD L+ A + + +PVVG GAGE+S SRTSS+C+LAREDL + KV LTGKP EH ELPQVGRY+ +KY H+DAFDLSTEDGRRFA NGGQR TVL+YLNDV GG T FP L + +QP++GMA+VFFPAT+DG+LD LHAA PA+DTK+VSQ+WIRQ Y+G P+ R+ Sbjct: 9 VNPSYPGLRVLNNSPPIFAVENFLTPYECDFLIHAAVDALGPAPVVGKGAGEISPSRTSSTCYLAREDLGDLMRKVSLLTGKPPEHCELPQVGRYFYQEKYLQHFDAFDLSTEDGRRFAANGGQRTVTVLIYLNDVMRGGATRFPALNLDIQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKFVSQVWIRQSIYNGQPSKRL 213
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Match: A0A7S2UA87_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA87_9STRA) HSP 1 Score: 265 bits (676), Expect = 1.570e-77 Identity = 125/205 (60.98%), Postives = 155/205 (75.61%), Query Frame = 1 Query: 1186 LNPLYPGLRPLWEMPPLYVVDDFFTAPECDALMALASNYMVASPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMTLTGKPFEHLELPQVGRYYTSQKYANHWDAFDLSTEDGRRFAQNGGQRVCTVLVYLNDVASGGCTAFPQLGMKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARI 1800 +NP YPGL L PP++ VD+F + ECD L+A + + +PVVG G GEVSE+RTSS+C+LAREDLP +K+M LTGKP EH ELPQ+GRY SQKY H+DAFDL E GRRFA NGGQR TVL+YLNDV +GG T FP L ++V+P++GMA+VFFPAT+DG LD LHAA PA+DTK+VSQ+WIRQG Y G P+ + Sbjct: 55 VNPSYPGLHVLNSSPPVFCVDNFLSPEECDFLIASSLDSFAPAPVVGKGGGEVSETRTSSTCYLAREDLPLYMNKIMALTGKPLEHCELPQIGRYLPSQKYLQHFDAFDLGDEHGRRFASNGGQRTVTVLLYLNDVMNGGHTTFPSLNLEVKPRRGMAIVFFPATIDGYLDKMALHAALPAIDTKFVSQVWIRQGNYEGQPSKHL 259
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Match: A0A6U3RVV9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RVV9_9STRA) HSP 1 Score: 269 bits (688), Expect = 2.380e-77 Identity = 133/208 (63.94%), Postives = 158/208 (75.96%), Query Frame = 1 Query: 1177 FLQLNPLYPGLRPLWEMPPLYVVDDFFTAPECDALMALASNYMVASPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMTLTGKPFEHLELPQVGRYYTSQKYANHWDAFDLSTEDGRRFAQNGGQRVCTVLVYLNDVASGGCTAFPQLGMKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARI 1800 F +NP YPG+R + PP++ VD+F T EC L+ A++ +PVVG GAGE+S+SRTSS+C+LAREDLP KV LTGKP EH ELPQVGRY SQ+Y H+DAFDLS EDGRRFA NGGQR TVLVYLNDV+ GG TAFP L ++VQPK+GMA+VFFPAT+DG LD LHAA PAVD K+VSQ+WIRQG Y G P+ RI Sbjct: 181 FNGVNPNYPGVRMIHSSPPIFTVDNFLTTEECHFLIHSATDSFGPAPVVGKGAGELSKSRTSSTCYLAREDLPEYMMKVTALTGKPMEHCELPQVGRYLPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVSRGGQTAFPSLNIEVQPKQGMALVFFPATVDGYLDKMALHAALPAVDPKYVSQVWIRQGNYEGQPSKRI 388
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Match: A0A7S2YBM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YBM7_9STRA) HSP 1 Score: 261 bits (668), Expect = 2.390e-77 Identity = 126/202 (62.38%), Postives = 153/202 (75.74%), Query Frame = 1 Query: 1186 LNPLYPGLRPLWEMPPLYVVDDFFTAPECDALMALASNYMVASPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMTLTGKPFEHLELPQVGRYYTSQKYANHWDAFDLSTEDGRRFAQNGGQRVCTVLVYLNDVASGGCTAFPQLGMKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPT 1791 +NP YPGLR L PP++ VD+F T ECD L+ +A + +PVVG G GE+S SRTSS+C+LAREDLP + KV LTGKP +H ELPQVGRY+ SQ+Y H+DAFDL TEDG RFA NGGQR TVL+YLND GG T FP L ++VQP++GMA+VFFPAT+DG+LD LHAA PA+DTK+VSQ WIRQ YSG P+ Sbjct: 22 VNPSYPGLRVLNTSPPMFCVDNFLTPFECDFLVQVAQDSFGPAPVVGKGVGEISPSRTSSTCYLAREDLPDLLRKVSLLTGKPMDHCELPQVGRYFASQQYLQHFDAFDLGTEDGLRFAANGGQRTVTVLIYLNDCERGGGTRFPALNLEVQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKYVSQCWIRQSTYSGQPS 223
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Match: A0A6U0TVS1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0TVS1_9STRA) HSP 1 Score: 266 bits (681), Expect = 2.680e-77 Identity = 127/205 (61.95%), Postives = 160/205 (78.05%), Query Frame = 1 Query: 1186 LNPLYPGLRPLWEMPPLYVVDDFFTAPECDALMALASNYMVASPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMTLTGKPFEHLELPQVGRYYTSQKYANHWDAFDLSTEDGRRFAQNGGQRVCTVLVYLNDVASGGCTAFPQLGMKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARI 1800 +NP YPGLR + + PP++ VD+F T ECD L+ A + + +PVVG G+GEVS SR+SS+C+LAREDLP KV LTGKPF+H ELPQVGRY +Q+Y H+DAFDLS+EDGRRFA NGGQR T+LVYLNDV++GG T FP+L ++VQP++GMA+VFFPAT+DG LD LHAA PAVD K+VSQ+WIRQ Y G P+ R+ Sbjct: 104 VNPEYPGLRVVNQNPPIFAVDNFLTPAECDFLIYAAQDSLGPAPVVGKGSGEVSSSRSSSTCYLAREDLPGYIRKVTLLTGKPFQHCELPQVGRYLPTQQYLQHFDAFDLSSEDGRRFASNGGQRTITILVYLNDVSTGGNTVFPRLNIQVQPRRGMALVFFPATVDGTLDKMTLHAALPAVDVKYVSQVWIRQTNYDGVPSKRL 308 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1035.381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1035.381.1 >prot_L-elsbetiae_contig1035.381.1 ID=prot_L-elsbetiae_contig1035.381.1|Name=mRNA_L-elsbetiae_contig1035.381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=546bp MMDGGCDDFGSSSSRNGAGNTTNSAYFQQGQLYSGSYALPGAFSDAGQTPback to top mRNA from alignment at L-elsbetiae_contig1035:5109..11617- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1035.381.1 ID=mRNA_L-elsbetiae_contig1035.381.1|Name=mRNA_L-elsbetiae_contig1035.381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6509bp|location=Sequence derived from alignment at L-elsbetiae_contig1035:5109..11617- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1035:5109..11617- >mRNA_L-elsbetiae_contig1035.381.1 ID=mRNA_L-elsbetiae_contig1035.381.1|Name=mRNA_L-elsbetiae_contig1035.381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3276bp|location=Sequence derived from alignment at L-elsbetiae_contig1035:5109..11617- (Laminarionema elsbetiae ELsaHSoW15)back to top |