prot_L-elsbetiae_contig1532.3773.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1532.3773.1
Unique Nameprot_L-elsbetiae_contig1532.3773.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length780
Homology
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BLAST of mRNA_L-elsbetiae_contig1532.3773.1 vs. uniprot
Match: D7FR13_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR13_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 1.950e-90
Identity = 303/536 (56.53%), Postives = 334/536 (62.31%), Query Frame = 0 
Query:  221 VGSVEFDPQADCRPSVIDSHHHNHANAXXXXXXXXX-SPTSWWRDVPEPAASNFPWDLQLPNPAPPLALSSH----------AGXXXXXXXXXXXXXXXXXXGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGATDHSPMCRCEACRFGRPSASSLAGLGPAPSLGGXXHRHRGGAAEQHLSQSSSALDILENXXXXXXXXXXXX----------ILLDAVGRGSYXXXXXXXXXXVRWGSNASPPSATEIAWGLGSSRSGGGAGE--------NYLTAR-KLEESRRGQAPPCDALVPPAAHAPAYNVVPVNPRSLLHAGPLG---------GDRYGAHEFKSLSMASGDPEGVVFGRGGGRG--------DIMPRAKRVRVMKREMESMHLSPGGXXXXXXLSSEEAAFSRLMERSSGG-------GGRSRGAVGGHGGHPSMRDAVGSWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----RRCRDESCNSHPNFGIEGDRKAIYCAKHKLPGMVNVKAP 698
            VGSVEFDPQADCR  V+D HHH               SPTSWWRD PEP  S FPWDLQLPNPAPPLALSSH            XXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DH P+   +ACRFG+PSASSLAGLGPAP +GG   RH                     XXXXXXXXXXXX          +LLDAVGRG Y           RWG  +SPPS TE+ WGL  SR+G             ++L+AR KLE+SRRG APPCD LVPP  HAPAY++ P NPRSLL  G  G          DR+ AH+FK +SMA G+ +G +FG              D MPRAKR RVMKRE + +HLS  G      ++  ++ F RLMER  GG       GGRSR  + G   H  +RD  GSWG XXXXXXXXXXXXXXXXXXXXXXXXXXX             RRCR E C SHPNFGIEGDR+A+YCAKHKLPGMVNVKAP
Sbjct:  375 VGSVEFDPQADCRAPVVDPHHHQXXXXQVSVTSTAGGSPTSWWRDAPEPVVSTFPWDLQLPNPAPPLALSSHNVGSGGGLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHPPLNNWDACRFGKPSASSLAGLGPAPDIGGG-QRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAMLLDAVGRGPYGAG-------ARWGPGSSPPSVTEVVWGLSGSRNGXXXXXXXXXXXXXSFLSARNKLEDSRRGTAPPCDTLVPPGPHAPAYDI-PNNPRSLLGMGSAGXXXXXXXXXSDRFVAHDFKPVSMAPGETDGAMFGGSXXXXXXXXXXXRDDMPRAKRARVMKREADGIHLSSNGGG----MAGGDSVFERLMERGRGGELGGGGAGGRSRAVINGVD-HAPLRDGAGSWGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRTTARGKKSPATSRRCRHEGCQSHPNFGIEGDRRAVYCAKHKLPGMVNVKAP 896
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1532.3773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR13_ECTSI1.950e-9056.53EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR13... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1532contigL-elsbetiae_contig1532:5590..9329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1532.3773.1mRNA_L-elsbetiae_contig1532.3773.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1532 5521..9374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1532.3773.1 ID=prot_L-elsbetiae_contig1532.3773.1|Name=mRNA_L-elsbetiae_contig1532.3773.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=780bp
MKEYFRRSQRAPGAGGHGQHDGGEHGHGHGHGGGGGGGHPELKHEYDHDH
DLQHRYPFFEGAASAVFRPRGGGGGGISVLPGLTGDMSNHGLRREGSAND
TSIASQEQANGVGVGEVVDGTAGGIGVGNGGVQQHEQQQQQQRSNIMPWQ
HEMINGNGGYSPSSVNHHQGGGGGGSNHHNISNDGGGGDGEDNGSSGIVG
AGAGGGGGGGGGEGGTDPGDVGSVEFDPQADCRPSVIDSHHHNHANATVS
AAGGGSSPTSWWRDVPEPAASNFPWDLQLPNPAPPLALSSHAGGGGGGGG
GLQESALGGGGGVGGGRGGGGGPPASLMGGSAGMPTVRGGGSGGGATDHS
PMCRCEACRFGRPSASSLAGLGPAPSLGGGGHRHRGGAAEQHLSQSSSAL
DILENGGNGGMRSGGSTILLDAVGRGSYGGGGGGGGGGVRWGSNASPPSA
TEIAWGLGSSRSGGGAGENYLTARKLEESRRGQAPPCDALVPPAAHAPAY
NVVPVNPRSLLHAGPLGGDRYGAHEFKSLSMASGDPEGVVFGRGGGRGDI
MPRAKRVRVMKREMESMHLSPGGGGAGAGLSSEEAAFSRLMERSSGGGGR
SRGAVGGHGGHPSMRDAVGSWGGGGGGGRGRDGGGGGGSSSSGGSNRAPT
RQKKAAASSRRCRDESCNSHPNFGIEGDRKAIYCAKHKLPGMVNVKAPRC
REPGCTRNPVYGHLGDPRATFCLSHKSPLMVDVKNRCCEHPGCKHQPSFG
LVGDRRANFCFAHKLPTHVNIRRARARAS*
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