mRNA_L-elsbetiae_contig10344.377.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Match: A0A6H5KNS3_9PHAE (GT49 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNS3_9PHAE) HSP 1 Score: 191 bits (484), Expect = 3.640e-51 Identity = 112/213 (52.58%), Postives = 130/213 (61.03%), Query Frame = 2 Query: 170 IRVKCFARALPLCDAFRRTTRGPQEPSWYPINQLRNKAMAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASCRLNCIVLPAFEVLAPSEDDERERGVCTTDNQRRRQKTAMINPDESFWSRRTLSSKVGLLQVWPQGHRATSSEPGVVPFVIXXXXXXXXXXNFDRWKGA---SASYEVAYEEGFGPFVIMNRLLVPAFDERFEG 799 +RV+CF R P + SWYPINQLRN+A+AQA TDLVLICD+DFRPC+RL RL AS S + KR SCRLNC+VLPAFEV A +DD+ GV D Q A P++S+W + TL+ K LL+ W QG V PF NFDRWK A S YEVAYEEGF PFVIMNR+LVPAFDERFEG Sbjct: 102 VRVQCFTRG------------SPSKASWYPINQLRNRALAQAGTDLVLICDVDFRPCRRLTRLLRASGEIGS-IFKRVSCRLNCVVLPAFEVSAARDDDD--DGVSNEDVA---QTAATEMPEKSWWLK-TLACKQELLKQWEQGR--------VAPFASRVWAQGHRATNFDRWKAATDLSGWYEVAYEEGFEPFVIMNRVLVPAFDERFEG 287
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Match: A0A059LMG0_9CHLO (Dystroglycan glycosyl-transferase (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LMG0_9CHLO) HSP 1 Score: 84.7 bits (208), Expect = 3.040e-15 Identity = 69/221 (31.22%), Postives = 96/221 (43.44%), Query Frame = 2 Query: 158 AKVNIRVKCF---ARALPLCDAFRRTTRGPQEPSW----YPINQLRNKAMAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASCRLNCIVLPAFEVLAPSEDDERERGVCTTDNQRRRQKTAMINPDESFWSRRTLSSKVGLLQVWPQGHRATSSEPGVVPFVIXXXXXXXXXXNFDRWKGASASYEVAYEEGFGPFVIMNRLLVPAFDERFEG 799 A V RV+ F A + LC + E W YP+N +RN+A+A A TD+VL+ D+DF P L LA S A L+ A+ N IVLPAFE R+ G + R A+ + R K + GHRAT ++ +W A+ Y V YEEG+ P++++ R VP +DERF G Sbjct: 79 ASVASRVRAFHAAAESKGLCKLDLQLVSQDVESVWLSALYPVNAMRNRALAAARTDVVLLLDVDFWPSAELGELA--SSARKYASLREATAARNAIVLPAFET--------RDSGGVGVEAAR---DAALDGKSAAAQMYRDGRLKAFHADRYRAGHRAT---------------------DYAKWLEATRPYRVRYEEGYEPYILVARAAVPWYDERFVG 265
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Match: R1FUP9_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FUP9_EMIHU) HSP 1 Score: 81.3 bits (199), Expect = 1.880e-13 Identity = 65/184 (35.33%), Postives = 81/184 (44.02%), Query Frame = 2 Query: 254 YPINQLRNKAMAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASC--RLNCIVLPAFEVLAPSEDDERERGVCTTDNQRRRQKTAMINPDESFWSRRTLSSKVGLLQVWPQGHRATSSEPGVVPFVIXXXXXXXXXXNFDRWKGASASYEVAYEEGFGPFVIMNRLLVPAFDERFEG 799 YPIN RN A+ A T+LVL+ D+DF P L S A SA R C +VLPAFE A D E K A+ + +R T +S +PQGHRAT S+ RW +Y V +EEGF PFV+ +R LVP +DERF G Sbjct: 264 YPINAARNAALRLATTELVLLLDVDFLPSTGL-----HSTVAGSAAELRRRCVEERRLLVLPAFESCA----DACEAAALAAGG-----KPALAAAVVAGHAR-TFASDGRCGDTFPQGHRATDSK---------------------RWLATDGAYSVEHEEGFEPFVVASRRLVPPYDERFTG 411
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Match: R1F701_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F701_EMIHU) HSP 1 Score: 80.9 bits (198), Expect = 2.330e-13 Identity = 65/184 (35.33%), Postives = 81/184 (44.02%), Query Frame = 2 Query: 254 YPINQLRNKAMAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASC--RLNCIVLPAFEVLAPSEDDERERGVCTTDNQRRRQKTAMINPDESFWSRRTLSSKVGLLQVWPQGHRATSSEPGVVPFVIXXXXXXXXXXNFDRWKGASASYEVAYEEGFGPFVIMNRLLVPAFDERFEG 799 YPIN RN A+ A T+LVL+ D+DF P L S A SA R C +VLPAFE A D E K A+ + +R T +S +PQGHRAT S+ RW +Y V +EEGF PFV+ +R LVP +DERF G Sbjct: 107 YPINAARNAALRLATTELVLLLDVDFLPSTGL-----HSTVAGSAAELRRRCVEERRLLVLPAFESCA----DACEAAALAAGG-----KPALAAAVVAGRAR-TFASDGRCGDTFPQGHRATDSK---------------------RWLATDGAYSVEHEEGFEPFVVASRRLVPPYDERFTG 254
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Match: A0A2P6TTI8_CHLSO (Glycosyltransferase LARGE2 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TTI8_CHLSO) HSP 1 Score: 80.9 bits (198), Expect = 2.530e-13 Identity = 70/221 (31.67%), Postives = 93/221 (42.08%), Query Frame = 2 Query: 158 AKVNIRVKCF---ARALPLCDAFRRTTRGPQEPSW----YPINQLRNKAMAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASCRLNCIVLPAFEVLAPSEDDERERGVCTTDNQRRRQKTAMINPDESFWSRRTLSSKVGLLQVWPQGHRATSSEPGVVPFVIXXXXXXXXXXNFDRWKGASASYEVAYEEGFGPFVIMNRLLVPAFDERFEG 799 A+V + K F A A LC E W YP+N +RN+A+A A TD VL+ D+DF P L+ L A A L IVLPA+E D + GV K A + + FW R + + GHRAT N+ RW A+ Y + YEEG+ P+VI++R VP +DERF G Sbjct: 248 AEVEAKFKQFHQLAEAKGLCKLDLMLVSQTVESVWLSALYPVNAMRNRALANAHTDAVLLLDVDFWPSAELSELM--QKPAKYASLMSTLDNGTAIVLPAYET-----GDAGDIGVEVAREAVLEGKDAAV---KMFWDGRIKAFHTDRYEA---GHRAT---------------------NYKRWLEAARPYPIQYEEGYEPYVIIHRRYVPWYDERFVG 434
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Match: A0A087SFK7_AUXPR (Glycosyltransferase-like protein LARGE2 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFK7_AUXPR) HSP 1 Score: 79.0 bits (193), Expect = 7.090e-13 Identity = 62/205 (30.24%), Postives = 92/205 (44.88%), Query Frame = 2 Query: 236 PQEPSW-YPINQLRNKAMAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASCRLNCIVLPAFEVLAPSEDDERERGVCTTDNQRRRQKTAMINPDESFWSRRTLSSKVGLLQV------WPQGHRATSSEPGVVPFVIXXXXXXXXXXNFDRWKGASASYEVAYEEGFGPFVIMNRLLVPAFDERFEG*-WQKQGAYP 826 P SW YP N LRN+A+A+A T LVL+ D+DF A D AL R IVLPAF+ TT N + TA+ + + S+ + +++ ++ + +GH AT +++RW +S Y + Y+ G+ PF++++RL VP FDERF G W K G P Sbjct: 172 PANESWAYPYNSLRNQAIARARTRLVLLLDVDFLVSTGARERLLARDAWVWAL-DATYARRQAIVLPAFQ---------------TTLNLSLAEGTAVAHDSAAAGSKAYMKAEMAAGRITRFAPFFLKGHNAT---------------------DYNRWFRSSTPYPITYQRGYEPFILVSRLHVPWFDERFRGYGWDKVGTLP 339
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Match: E1ZGE6_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGE6_CHLVA) HSP 1 Score: 78.6 bits (192), Expect = 1.050e-12 Identity = 58/182 (31.87%), Postives = 82/182 (45.05%), Query Frame = 2 Query: 254 YPINQLRNKAMAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASCRLNCIVLPAFEVLAPSEDDERERGVCTTDNQRRRQKTAMINPDESFWSRRTLSSKVGLLQVWPQGHRATSSEPGVVPFVIXXXXXXXXXXNFDRWKGASASYEVAYEEGFGPFVIMNRLLVPAFDERFEG 799 YP+N +RN+A+A A TD VL+ D+DF P L+ L +L+K +VLPA+E P + GV K A + + FW R + + GHRAT ++ +W AS Y + YEEGF P+VI++R VP +DERF G Sbjct: 251 YPVNAMRNRALANARTDAVLLLDVDFWPSAELSELM-QKPAKYESLMKTLQAGA-AVVLPAYETGDPGDI-----GVEVAREAVLEGKDAAV---KMFWDGRIKAFHTDRYEA---GHRAT---------------------DYKKWLQASRPYNIMYEEGFEPYVIISRKFVPWYDERFVG 398
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Match: A0A2P6TUU9_CHLSO (Glycosyltransferase LARGE2 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TUU9_CHLSO) HSP 1 Score: 78.2 bits (191), Expect = 1.490e-12 Identity = 63/189 (33.33%), Postives = 90/189 (47.62%), Query Frame = 2 Query: 254 YPINQLRNKAMAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASCRLNCIVLPAFEVLAPSEDDERERGVCTTDNQRRRQKTAMINPDESFWSRRTLSS--KVGLLQV-----WPQGHRATSSEPGVVPFVIXXXXXXXXXXNFDRWKGASASYEVAYEEGFGPFVIMNRLLVPAFDERFEG 799 YP+N LRN+A+ A+T++VL+ D DF P + L L D L+R + IVLPAFE + D+ E G ++TA+ ++ SR LS K G L+ + +GHRAT RW + SY + YEEGF P+V++ R VP +DERF+G Sbjct: 276 YPVNALRNRALMLAQTEVVLLLDADFLPARALTDLI--HDPLMYEQLRRVTGYRQGIVLPAFETI-----DDGEMG----------KQTAL----KAIKSREALSELFKHGELRGFHMDHYNRGHRATDHA---------------------RWFETNISYRIPYEEGFEPYVLVQRRFVPWYDERFKG 422
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Match: A0A1D1ZRI6_AUXPR (Uncharacterized protein (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZRI6_AUXPR) HSP 1 Score: 76.6 bits (187), Expect = 3.060e-12 Identity = 62/215 (28.84%), Postives = 93/215 (43.26%), Query Frame = 2 Query: 236 PQEPSW-YPINQLRNKAMAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASCRLNCIVLPAFEVLAPSEDDERERGVCTTDNQRRRQKTAMINPDESFWSRRTLSSKVGLLQV------WPQGHRATSSEPGVVPFVIXXXXXXXXXXNFDRWKGASASYEVAYEEGFGPFVIMNRLLVPAFDERFEG*-WQKQGAYPLCVCAPFTFI 856 P SW YP N LRN+A+A+A T LVL+ D+DF A D AL R IVLPAF+ TT N + TA+ + + S+ + +++ ++ + +GH AT +++RW +S Y + Y+ G+ PF++++RL VP FDERF G W K V F + Sbjct: 72 PANESWAYPYNSLRNQAIARARTRLVLLLDVDFLVSMGARERLLARDAWVWAL-DATYARRQAIVLPAFQ---------------TTLNLSLAEGTAVAHDSAAAGSKAYMKAEMAAGRITRFAPFFLKGHNAT---------------------DYNRWFRSSTPYPITYQRGYEPFILVSRLHVPWFDERFRGYGWDKISHMHAMVATGFQLV 249
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Match: A0A2P6VGE4_9CHLO (Glycosyltransferase LARGE2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VGE4_9CHLO) HSP 1 Score: 75.5 bits (184), Expect = 1.180e-11 Identity = 56/182 (30.77%), Postives = 85/182 (46.70%), Query Frame = 2 Query: 254 YPINQLRNKAMAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASCRLNCIVLPAFEVLAPSEDDERERGVCTTDNQRRRQKTAMINPDESFWSRRTLSSKVGLLQVWPQGHRATSSEPGVVPFVIXXXXXXXXXXNFDRWKGASASYEVAYEEGFGPFVIMNRLLVPAFDERFEG 799 YP+N LRNKA+ ++T++VL+ D DF P + L+ + D L+R + IVLPAFE + D+ E G T A+ + D + + + + +GHRAT + RW + SY + YEEGF P+V++ R VP +DERF+G Sbjct: 274 YPVNALRNKALQLSQTEIVLLLDADFLPNRALSDMI--HDQRMYDQLRRVTGYRQGIVLPAFETI-----DDGEEGKSTA-------LKAIKSRDVLHELFKRGELRGFHMDHYNRGHRAT---------------------DHSRWFETNISYRIPYEEGFEPYVLVQRRFVPWYDERFKG 420 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10344.377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10344.377.1 >prot_L-elsbetiae_contig10344.377.1 ID=prot_L-elsbetiae_contig10344.377.1|Name=mRNA_L-elsbetiae_contig10344.377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=173bp MAQAETDLVLICDIDFRPCQRLARLACASDTASSALLKRASCRLNCIVLPback to top mRNA from alignment at L-elsbetiae_contig10344:4712..5585+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10344.377.1 ID=mRNA_L-elsbetiae_contig10344.377.1|Name=mRNA_L-elsbetiae_contig10344.377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=874bp|location=Sequence derived from alignment at L-elsbetiae_contig10344:4712..5585+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10344:4712..5585+ >mRNA_L-elsbetiae_contig10344.377.1 ID=mRNA_L-elsbetiae_contig10344.377.1|Name=mRNA_L-elsbetiae_contig10344.377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1038bp|location=Sequence derived from alignment at L-elsbetiae_contig10344:4712..5585+ (Laminarionema elsbetiae ELsaHSoW15)back to top |