prot_L-elsbetiae_contig1531.3766.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1531.3766.1
Unique Nameprot_L-elsbetiae_contig1531.3766.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length194
Homology
BLAST of mRNA_L-elsbetiae_contig1531.3766.1 vs. uniprot
Match: Q8QNN3_ESV1K (EsV-1-28 n=2 Tax=root TaxID=1 RepID=Q8QNN3_ESV1K)

HSP 1 Score: 159 bits (401), Expect = 8.740e-46
Identity = 84/198 (42.42%), Postives = 116/198 (58.59%), Query Frame = 0
Query:    1 MARIINQNGVLEVRISMQGEESGNGVYAIDDVKAGTILPYSAVAFKESN------APEDMDRTYVIGANFYNAKGKACTFKIYSVDGKPFLEPVEPLEEFAKLGCHINEASVGKKINCILCINPSLTIGTFRESFEKQKPFTATYIVITKDLQAGTELLTSYGREYENRGYRVCKMNRKTYEALVDRAYDFIDELAQK 192
            ++ I++++G+ E R S QGE +G+GV+   DVKAGTILPY  +   +           D  RTYVI A++    G   T K  SVDG P L  ++ LE++ KL C INEAS G   NC+L  NP ++      S  K+ P    YIV+ + L  GTELLT YG+E+ +R Y  CKMNR+T+  L DRAY  +D L ++
Sbjct:    2 VSSIVDKDGIFECRKSKQGENAGSGVFCAHDVKAGTILPYYGITISDDVEVHDDIVSSDNYRTYVISADYCTKYGTRRTAKGLSVDGDPRLPRIQKLEKYKKLACQINEASEGCLPNCLLTTNPRISRADINRSLLKKVPIPIAYIVVLESLPNGTELLTFYGKEFGDRAYSSCKMNRRTHRQLADRAYAHVDALPKQ 199          
BLAST of mRNA_L-elsbetiae_contig1531.3766.1 vs. uniprot
Match: A0A6H5KKN2_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN2_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 7.820e-34
Identity = 72/178 (40.45%), Postives = 102/178 (57.30%), Query Frame = 0
Query:   22 SGNGVYAIDDVKAGTILPYSAVAFKESN-------APEDMDRTYVIGANFYNAKGKACTFKIYSVDGKPFLEPVEPLEEFAKLGCHINEASVGKKINCILCINPSLTIGTFRESFEKQKPFTATYIVITKDLQAGTELLTSYGREYENRGYRVCKMNRKTYEALVDRAYDFIDELAQK 192
            +G GV+ +D V+AGTILPY  V  K+ +         ++  RTYV+ A++ N  G   T + YSVDG P L  +E L+ F KL C INEAS G   NC+L  N +++    + S  +     AT+IV  +DL+ GTEL T YG EY  RGYR  KM R     ++D+AY+ + +  +K
Sbjct:  749 AGMGVFCVDSVEAGTILPYYGVTIKDDDDDDRNARCSQEGYRTYVVSADYTNRSGNQRTVEGYSVDGDPSLPVIEELDGFKKLACRINEASDGFAPNCLLVSNRAISRADIKRSLAEHSAIPATFIVTIEDLKRGTELFTCYGDEYGERGYRPSKMKRSRLRQMIDKAYEHMAKRVKK 926          
BLAST of mRNA_L-elsbetiae_contig1531.3766.1 vs. uniprot
Match: A0A835Z5X5_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 9.150e-10
Identity = 46/156 (29.49%), Postives = 75/156 (48.08%), Query Frame = 0
Query:   21 ESGNGVYAIDDVKAGTILPYSAVAFKESNAPEDMDRTYVIGANFYNAKGKACTFKIYSVDGKPFLEPVEPLE----EFAKLGCHINEASVGKKINCILCINPSLTIGTFRESFEKQKPFTATYIVITKDLQAGTELLTSYGREYENRGYRVCKMNR 172
            E G GV A   +K GT+LP +AVA +E++     D +Y + + F +    A ++   +VDG  F    + L     +   L  +INEA +   +NC L   P  T      ++         ++++T+D+  G +LLT YG  Y   GY+V +  R
Sbjct:  136 EMGRGVVARCAIKKGTMLPLAAVAIREAHG---QDGSYQLDSAFISVN--AVSWDTVTVDGVVFDAHPKLLRGRVHQSWALASYINEARLNADVNCELFPAPHNTADDITTAYRMGSVILGAWMIVTRDVAEGEQLLTHYGTGYTREGYKVQRRIR 286          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1531.3766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Q8QNN3_ESV1K8.740e-4642.42EsV-1-28 n=2 Tax=root TaxID=1 RepID=Q8QNN3_ESV1K[more]
A0A6H5KKN2_9PHAE7.820e-3440.45SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z5X5_9STRA9.150e-1029.49SET domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.270.10coord: 9..173
e-value: 3.0E-6
score: 28.7
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 20..165
IPR001214SET domainPROSITEPS50280SETcoord: 11..157
score: 8.722

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1531contigL-elsbetiae_contig1531:17866..18447 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1531.3766.1mRNA_L-elsbetiae_contig1531.3766.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1531 17866..18447 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1531.3766.1 ID=prot_L-elsbetiae_contig1531.3766.1|Name=mRNA_L-elsbetiae_contig1531.3766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MARIINQNGVLEVRISMQGEESGNGVYAIDDVKAGTILPYSAVAFKESNA
PEDMDRTYVIGANFYNAKGKACTFKIYSVDGKPFLEPVEPLEEFAKLGCH
INEASVGKKINCILCINPSLTIGTFRESFEKQKPFTATYIVITKDLQAGT
ELLTSYGREYENRGYRVCKMNRKTYEALVDRAYDFIDELAQKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom