prot_L-elsbetiae_contig15270.3740.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15270.3740.1
Unique Nameprot_L-elsbetiae_contig15270.3740.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length93
Homology
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BLAST of mRNA_L-elsbetiae_contig15270.3740.1 vs. uniprot
Match: D8LDF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF5_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 2.180e-26
Identity = 64/95 (67.37%), Postives = 72/95 (75.79%), Query Frame = 0 
Query:    2 SLAKRPAAKLALASFLTLAVFAGEVALSSAMAGTGGSGSRGWRALVAP---AFAELEPLPLKSYSEEFSSGLAPVNTLRGLWRTRETRSDGSVLP 93
            SLA++  A +ALA+ LT AVF GEV +S  +AG GG         VAP   AFAELEPLPLKSYSEEFSSGLAPVNT+RGLWRTRETR+DGS LP
Sbjct:  118 SLARQALATVALAAVLTPAVFIGEVTVSPLLAGKGG---------VAPPTAAFAELEPLPLKSYSEEFSSGLAPVNTVRGLWRTRETRNDGSALP 203
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15270.3740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDF5_ECTSI2.180e-2667.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..93
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.791
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15270contigL-elsbetiae_contig15270:2812..3614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15270.3740.1mRNA_L-elsbetiae_contig15270.3740.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15270 2783..3614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15270.3740.1 ID=prot_L-elsbetiae_contig15270.3740.1|Name=mRNA_L-elsbetiae_contig15270.3740.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp
MSLAKRPAAKLALASFLTLAVFAGEVALSSAMAGTGGSGSRGWRALVAPA
FAELEPLPLKSYSEEFSSGLAPVNTLRGLWRTRETRSDGSVLP
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