prot_L-elsbetiae_contig1518.3701.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1518.3701.1
Unique Nameprot_L-elsbetiae_contig1518.3701.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1357
Homology
BLAST of mRNA_L-elsbetiae_contig1518.3701.1 vs. uniprot
Match: D8LBV2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV2_ECTSI)

HSP 1 Score: 477 bits (1227), Expect = 5.410e-141
Identity = 720/1243 (57.92%), Postives = 796/1243 (64.04%), Query Frame = 0
Query:   10 GAARLLTALAVLLPAASAQEAG-----AGVG---GLVGEQIAVGFRGRLGGATLRRLQDDDGCTDQTSVGDAEAGIAQYSDPDACVGDAPLVGCNVLGISECRLCLTKGGDASTTLPACPEDVVEIVEEIFPQTAETPAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQ---------TPAPSDQLELPXXXXXXXXXXXXXXXXPSLVDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGATSSPAATSGPAAVDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRDL-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSSP---TGXXXXXXXXXXXXXXXXXXXXXXXAPI------------------------------------DDPQESLIGTITIVSEEEPACEATATCGEVVEDGLEDSLGRDGTGTVNVTDVTVSSVAXXXXXXTTVAVDGVPSGGERRVLFATAG----NS-----LRGXXXXXXXXXXXANETETEIDYVSGPDASSNMTSSQQAAEQINALAETGIADLLEELGLPPDSEVELGTTKYVQIGAVTD-VSDFDDSLFAATATDRSISAGAYWGFAVSLIILVLGACLXXXXXMFCITKKDESNKRNAAGKRLDNLEEKTAIDDDGVGEFDLPKKAGTATHKPQKSGSLLGSIPFFGSVTRQNSVEGDVEAGSTPHSPVPEDHIFAYPPSAMLSGGGGTGKTQDPDDIRSPSSVGAPSGNDFFYATRRFGEPPLNMPSPRVQTAALAXXXXXXXXXXXXXXXXXXXXXXVA---------GLSSGEWPSPMSAXXXXXXXXXXXXXXXXXXXXXXXXXXLRSSSTVSAVSAGSMETKHDIGSDLRASSLSPASRAGGXXXXXXXXXXXXXXXXXXXXXXXXXXGKGXXXXXXXXXXXXXXXXXXXXXXXXHK-RAEFEALQLEHEAKHKEISARGRMALADFLLGTSDMTSPSSV-GRVGG-LPTVMEEASPTGAGSSSSDAGTSSQFAEGSQVGSQVSSSAEGTVIVQVGPGSLDSVADSAQGSSSAE 1173
            GAAR L ALA+LLPA++   A      A VG   GL GE++AVGFRGRL   T+RRLQ+D+GCT+ TSVGDAEAGIAQY DPDAC+ D PLVGCNVLGIS CRLC+T GG+A+  LP+CPE V EI+EE+FPQT +T AP                                       XXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXX    XXXXXXXXXX            T A        XXXXXXXXXXXXXXXX       XXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXX         A     +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +T +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +  L PXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXX    P+ SP   TG        XXXXXXXXXXXXXXX                                       D+P  SLIG+ITI+S+EEP CE    C EVVEDGLE SLGR+GT  VNVTDVTV+S A         A D     G R +LF   G    NS     LRG            N+TETEI+Y S PD SSN+T +QQAAEQINALAETGIADLL+E+GLPPD+EVELG TK+VQ+G +TD   D+D    AA A DRSIS  AY GFA+           XXXXXM CI+KKD S +R++   RL+ +EE TAI+DDG  EF+LP K  +   + ++  S +  IPFFG+ ++  + E D+EAG+T    V EDHIFAYPP    S GG +GKTQD  D   P+ +GAPSGNDFFYAT+RF +P +N PSPR  T ALA  XXXXXXXXXXXXX        A         G  S EWP P+S                             SSST+SAVSAGSMETKHD+ SD RASSLSPA RAG               XXXXXXXXXXXX   XXXXXXXXXXXXXXX          + RAEF ALQ EHEAK+KEISARGRMALADFLLGTSDMTSP+S  GR+GG LPTVMEE SP GA ++ SDAGTSSQ AEGSQVGSQVSSSAEGTVIVQV P   +SV DSA  S  AE
Sbjct:    6 GAARFLAALALLLPASTLAAAAPLGTTAAVGAVRGLEGEEVAVGFRGRLAARTVRRLQEDEGCTENTSVGDAEAGIAQYDDPDACLRDGPLVGCNVLGISSCRLCVTNGGEAADYLPSCPEGVEEIIEELFPQTRDTDAPSTAPPATETPLLEGATPAPADLVATPIPSEVGGTSSPAAXXXXXXXXXXXATSAPAIATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAXXXXXXXXATTAXXXXXXXXXXXXXXXXXXXAIVTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXAXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPTLAPXXXXXXXXXXXXXXXXXXGETWAPNLVRELPXXXXXXXXXXXXXXXXSLLAPTVSPFAFTGTPTAAPTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDEPDGSLIGSITIISDEEPECEGAGNCEEVVEDGLESSLGRNGT--VNVTDVTVTSTA--------AAADA----GRRVLLFVADGDVADNSSRNRLLRGSRQLQEEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVELGVTKFVQLGTITDDAEDWDGIFSAALADDRSISTAAYLGFALXXXXXXXXXXXXXXXXMLCISKKD-SRRRDSGVVRLEKIEESTAINDDGNDEFELPTKRMSEIKEQRRGSSFMNKIPFFGTSSKMKAGETDIEAGTTRR--VAEDHIFAYPPH---SSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRTSTGALAAGXXXXXXXXXXXXXKVAGRRRPATAAPAPAHAGEVSEEWPLPISTTTVGAAGAPGDSGL--------------SSSTISAVSAGSMETKHDVESDARASSLSPAGRAGSSGAINSGDAAGATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDDVPLEDIEQERAEFGALQQEHEAKNKEISARGRMALADFLLGTSDMTSPTSASGRIGGALPTVMEEGSPRGAQAAFSDAGTSSQVAEGSQVGSQVSSSAEGTVIVQVEP--AESV-DSAPSSVVAE 1211          
BLAST of mRNA_L-elsbetiae_contig1518.3701.1 vs. uniprot
Match: A0A6H5KWL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL3_9PHAE)

HSP 1 Score: 471 bits (1212), Expect = 2.030e-135
Identity = 805/1401 (57.46%), Postives = 893/1401 (63.74%), Query Frame = 0
Query:   10 GAARLLTALAVLLPA---ASAQEAGAG-------VGGLVGEQIAVGFRGRLGGATLRRLQDDDGCTDQTSVGDAEAGIAQYSDPDACVGDAPLVGCNVLGISECRLCLTKGGDASTTLPACPEDVVEIVEEIFPQTAET-------------------PAPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQTPAPSDQ----------------LELPXXXXXXXXXXXXXXXXPSLVDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGATSSPAATSGPAAVDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRDLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSSPTGXXXXXXXXXXXXXXXXXXXXXXXAPI----DDPQESLIGTITIVSEEEPACEATATCGEVVEDGLEDSLGRDGTGTVNVTDVTVSSVAXXXXXXTTVAVDGVPSGGERRVLFATAG--------NSLRGXXXXXXXXXXXANETETEIDYVSGPDASSNMTSSQQAAEQINALAETGIADLLEELGLPPDSEVELGTTKYVQIGAVTDVSDFDDSLF-AATATDRSISAGAYWGFAVSLIILVLGACLXXXXXMFCITKKDESNKRNAAGKRLDNLEEKTAIDDDGVGEFDLPKKAGTATHKPQKSGSLLGSIPFFGSVTRQNSVEGDVEAGSTPHSPVPEDHIFAYPPSAMLSGGGGTGKTQDPDDIRSPSSVGAPSGNDFFYATRRFGEPPLNMPSPRVQTAALAXXXXXXXXXXXXXXXXXXXXXXVA------GLSSGEWPSPMSAXXXXXXXXXXXXXXXXXXXXXXXXXXLRSSSTVSAVSAGSMETKHDIGSDLRASSLSPASRAGGXXXXXXXXXXXXXXXXXXXXXXXXXXGKGXXXXXXXXXXXXXXXXXXXXXXXXHKRAEFEALQLEHEAKHKEISARGRMALADFLLGTSDMTSPSSV-GRVGG-LPTVMEEASPTGAGSSSSDAGTSSQFAEGSQVGSQVS----SSAEGTVIVQVGPG-SLDSVADSAQGSSSAESXXXXXXXXXXXXLGLAXXXXXXXXXXXXXXXXXXXFP----STTSVRRTRPMVATDRSESSGSDQSSSAE------------AFPREPPATRVPPALTAAGSRSGXXXXXXLLGSGSDQGHPMSARSSTSTSTSRGSNLVGVSIIS-TPSTDSF-DLSPDSSPRR 1321
            GAAR L AL +LLPA   A+A  A  G       V GL GE++AVGFRGRL   T+RRLQ+++GCT+ TSVGDAEAGIAQY DPDAC+ + PLVGCNVLGIS CRLC+T GG+A+  LP+CPE+V EI+EEIFPQT +T                   PAP    XXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A T                      +   XXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXXXXXXXXXXXXXXX  XX XXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXX          XXXXXXXXXXXXXXXXX        IR+LPXXXXXXXXXXXXXXXX                      XXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXX       D+P  SLIG+ITI+S+E P C     C EVVEDGLE SLGR+GT  VNVTDVTV+S A         A D     G R +LF   G        N L              N+TETEI+Y S PD SSN+T +QQAAEQINALAETGIADLL+E+GLPPD+EVE+G TK+VQ+G +TD ++  DS+F AA A DRSIS  AY GFA+           XXXXXM C++KKD S +RNA   RL+ +EE TAI+DDG  EF+LP K  +   + ++  S +  IPFFGS  +  + E D+EAG+T    V EDHIFAYPP    S GG +GKTQD  D   P+ +GAPSGNDFFYAT+RF +P +N PSPR  T ALA     XXXXXXXX          A      G  S +WP P+S        XXXXXXXXXXXXXXXXX              GSMETKHD+ SD RASSLSPA RAG               XXXXXX   XXX   XXXXXXXXXX               + AEF ALQ EHEA++KEISARGRMALADFLLGTSDMTSP+S  GR+GG LPTVMEE SP GA ++ SDAGTSSQ AEGSQV         SSAEGTVIVQV P  S+DS   S  G      XXXXXXXX       A   XXXXXXXXXXXXXXXX      S    R+ RPM+ATDRSESSGS+QS+ +               PR       PPAL A+GS S        +GS    GHP S RSST++S   GSNL+GVS+IS TPS DS  + SP+SSPRR
Sbjct:    6 GAARFLAALTLLLPASTLAAAAPAPLGTTVAAGAVRGLEGEEVAVGFRGRLAALTVRRLQEEEGCTENTSVGDAEAGIAQYDDPDACLREGPLVGCNVLGISSCRLCVTNGGEAADYLPSCPEEVEEIIEEIFPQTRDTDVPSTAPPATETPLLEGATPAPADVVXXXXXXXXXXXXXXXXXXXXXXTAAPGVVSTXXXXXXXXXXXXXXXXXXXXLSPDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTAXGXXXXXXXXXXXXXXXXXAIVTTAXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAXXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPTLAPGXXXXXXXXXXXXXXXXXGETWAPNLIRELPXXXXXXXXXXXXXXXXSLLAPTVSPSAFTGTPTAAPTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDEPDGSLIGSITIISDEAPECAGAGNCEEVVEDGLESSLGRNGT--VNVTDVTVTSTA--------AAADA----GRRVLLFVADGDVADDSSRNRLLRGSRQLQEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVEIGVTKFVQLGTITDDAEDWDSIFSAALADDRSISTAAYLGFALXXXXXXXXXXXXXXXXMLCLSKKD-SRRRNAGVVRLEKIEESTAINDDGDDEFELPTKRMSEIKEQRRGSSFMNRIPFFGSSAKMKAGETDIEAGTTRR--VAEDHIFAYPPH---SSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRTSTGALATGAAAXXXXXXXXVADRRRPATAAAAPAHAGEVSEQWPLPISTTTVGAGGXXXXXXXXXXXXXXXXX--------------GSMETKHDVESDARASSLSPAGRAGSSGAINSGDAAGATTXXXXXXGVTXXXXXXXXXXXXXXXXTEQKRDDVSLEDIEQEHAEFGALQREHEAENKEISARGRMALADFLLGTSDMTSPTSASGRIGGALPTVMEEGSPRGAQAAFSDAGTSSQVAEGSQVXXXXXXXXXSSAEGTVIVQVEPAASVDSAPSSVVGXXXXXXXXXXXXXXIAGLTTEARLGXXXXXXXXXXXXXXXXXXXXXSSNARARQNRPMLATDRSESSGSEQSAPSXXXXXXXXXXXXXTIPR-------PPALLASGSGS----MSYSMGS---SGHPTSTRSSTTSSP--GSNLIGVSLISNTPSADSILEPSPESSPRR 1356          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1518.3701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBV2_ECTSI5.410e-14157.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KWL3_9PHAE2.030e-13557.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 755..775
NoneNo IPR availablePANTHERPTHR15124SELENOPROTEIN Wcoord: 133..202
coord: 136..299
NoneNo IPR availablePANTHERPTHR15124:SF17SELENOPROTEIN Vcoord: 136..299
coord: 133..202
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1211..1357
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..727
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 728..753
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 754..1186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1187..1210
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.826
NoneNo IPR availableTMHMMTMhelixcoord: 731..753
NoneNo IPR availableTMHMMTMhelixcoord: 1186..1208
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 421..500

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1518contigL-elsbetiae_contig1518:17579..24568 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1518.3701.1mRNA_L-elsbetiae_contig1518.3701.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1518 17579..24568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1518.3701.1 ID=prot_L-elsbetiae_contig1518.3701.1|Name=mRNA_L-elsbetiae_contig1518.3701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1357bp
MRQPADARRGAARLLTALAVLLPAASAQEAGAGVGGLVGEQIAVGFRGRL
GGATLRRLQDDDGCTDQTSVGDAEAGIAQYSDPDACVGDAPLVGCNVLGI
SECRLCLTKGGDASTTLPACPEDVVEIVEEIFPQTAETPAPMETPAPVDT
PAPVETPAPVETPAPMDTQAPVDTPAPVETPAPVETPAPVETPAPVETPA
PMDTQAPVDTPAPVETPAPVETPAPVETPAPVETPAPMETPAPVETPAPM
ETPAPVEVAQTPAPSDQLELPATPAPSEELVATPTIAPSLVDVVPTPTIA
PSLVDVVPTPTIAPSLLDVVPTPTIAPSLVEGATSSPAATSGPAAVDTAS
PAATSAPAMDLTTSPAATSAPAIDATASPGASAAPAAIATSAPGSTMSPG
ATASPATTAAPAPAVPTMAPGATLAPIVTLAPGATLAPGETFAPNMIRDL
PTLAPGATLAPGATLAPGATLAPGATLAPGATLAPGATLAPGATLAPGST
FGPSSSPTGSPTGSPSAAPSGAPTSAPTSSPTAPIDDPQESLIGTITIVS
EEEPACEATATCGEVVEDGLEDSLGRDGTGTVNVTDVTVSSVAAAATATT
TVAVDGVPSGGERRVLFATAGNSLRGGGERRLQQAAAANETETEIDYVSG
PDASSNMTSSQQAAEQINALAETGIADLLEELGLPPDSEVELGTTKYVQI
GAVTDVSDFDDSLFAATATDRSISAGAYWGFAVSLIILVLGACLCLCCCM
FCITKKDESNKRNAAGKRLDNLEEKTAIDDDGVGEFDLPKKAGTATHKPQ
KSGSLLGSIPFFGSVTRQNSVEGDVEAGSTPHSPVPEDHIFAYPPSAMLS
GGGGTGKTQDPDDIRSPSSVGAPSGNDFFYATRRFGEPPLNMPSPRVQTA
ALAAAAAAGGGRSAAEGGSSSAAGGVAGLSSGEWPSPMSAAGGGGGGGGG
GGGGGSGGGSGGVSSSLRSSSTVSAVSAGSMETKHDIGSDLRASSLSPAS
RAGGSSGGSSGAAVGGAAAAAAVVSAASAAGKGAEGRSQGGDLVDVDLVD
VDLVDVDHKRAEFEALQLEHEAKHKEISARGRMALADFLLGTSDMTSPSS
VGRVGGLPTVMEEASPTGAGSSSSDAGTSSQFAEGSQVGSQVSSSAEGTV
IVQVGPGSLDSVADSAQGSSSAESATGGRRRGGGGGLGLAGGASGVAAAA
VAAGASAAAFPSTTSVRRTRPMVATDRSESSGSDQSSSAEAFPREPPATR
VPPALTAAGSRSGSGSGSGLLGSGSDQGHPMSARSSTSTSTSRGSNLVGV
SIISTPSTDSFDLSPDSSPRRRRSSPKPPLPSLPPVKEASQEWASTSTTA
ATATVAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011004Trimer_LpxA-like_sf