mRNA_L-elsbetiae_contig10330.370.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10330.370.1
Unique NamemRNA_L-elsbetiae_contig10330.370.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: D7G127_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G127_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 1.920e-83
Identity = 136/194 (70.10%), Postives = 162/194 (83.51%), Query Frame = 1 
Query:    1 MGLTMCLAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKGMKEPSPFAELSAPADEGHAKDQ 582
            MG+ MC+ ++ALSAL AL  EA+SWY VYRKPEYQ+LKRHIE LV+D+EKKKAEPV    S ++K K+ + +SRLEKDLA+A+K+LQ L   +K++VAV +MVVM ++ KSFAGIVVAKLPFVP SL+Q ISHR L+GEDPTDCSVAFIFALCQAGVKGNI KLVGVG PKGMKE +PFAEL AP +E HAK Q
Sbjct:    1 MGVLMCVVIMALSALIALLTEAYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPV--GGSVERKVKNLKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMIAINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPKGMKEANPFAELGAPVEEDHAKVQ 192
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BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A2J6LTV4_LACSA (Calcium load-activated calcium channel n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LTV4_LACSA)

HSP 1 Score: 112 bits (280), Expect = 1.090e-27
Identity = 67/174 (38.51%), Postives = 101/174 (58.05%), Query Frame = 1 
Query:   19 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKS-FAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKGMKEPSPF 537
            L +  +S  TA+  EA SW ++YR+  Y+ LK  I+   + +E  K  P  +  S+ KK      +SR+E  L D+S++L      S  +VA+ V+ V+F V  S + G  V KLPFVP S++Q +SHR L G+DPTDCS+AF++ LC   ++ N+ K +G   P+G   P  F
Sbjct:   11 LTIAGISLFTAIVCEAISWLLIYRRTSYKSLKSTIDQASKKLETMKTTPTTLKKSKAKK------ISRVETSLKDSSRDLSLSKFKSGAVVAL-VLAVVFGVMNSLYEGKAVGKLPFVPVSIVQKMSHRGLRGDDPTDCSMAFLYFLCSMSIRTNLQKFLGFSPPRGAAGPGLF 177
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BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A0A0LGX0_CUCSA (Calcium load-activated calcium channel n=7 Tax=fabids TaxID=91835 RepID=A0A0A0LGX0_CUCSA)

HSP 1 Score: 111 bits (278), Expect = 2.420e-27
Identity = 62/166 (37.35%), Postives = 98/166 (59.04%), Query Frame = 1 
Query:   19 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 516
            L+V+ +S  TA+  EA SW ++YR   Y+ L+  I+   + +E  K +  +IT  + K KK    + R+E  L ++S++L      S  +VA+ + VV   +   F G VVAKLPF PF L+  +SHR L G+DPTDC++AF++ LC   ++ N+ K +G   P+G
Sbjct:   16 LSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKK----IDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRG 177
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BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: W9SNZ3_9ROSA (Calcium load-activated calcium channel n=7 Tax=fabids TaxID=91835 RepID=W9SNZ3_9ROSA)

HSP 1 Score: 110 bits (276), Expect = 4.800e-27
Identity = 63/166 (37.95%), Postives = 95/166 (57.23%), Query Frame = 1 
Query:   19 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 516
            L V+ +S  TA+  EA SW ++YR   Y+ L+  I+   + +E  K E  +I   + K KK    + R+E  L ++S++L      S  +VA+ + VV   +   F G VVAKLPF PF L+  +SHR L G DPTDCS+AF++ LC   ++ N+ K +G   P+G
Sbjct:   16 LRVVGISICTAVVCEAISWLLIYRTNSYKSLRSSIDKAAKKLETMKTESAKIAAKKSKTKK----IDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 177
[Close]
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A1S4CK71_TOBAC (Calcium load-activated calcium channel n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CK71_TOBAC)

HSP 1 Score: 109 bits (272), Expect = 1.760e-26
Identity = 63/166 (37.95%), Postives = 94/166 (56.63%), Query Frame = 1 
Query:   19 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 516
            L ++ +S  TA+  EA SW ++YR   Y  LK +I     D   KK E ++  +S  KK    + + R E  L D+S++L      S  +VA+ + +V   +   F G VVAKLPFVPF ++Q +SHR L G D TDCS+AF++ LC   ++ N+ K +G   P+G
Sbjct:   15 LTIVGISICTAVICEAISWVLIYRTTSYNSLKSNI-----DKASKKLETMKTLES--KKPNKSKKIDRFETSLKDSSRDLSLFKFKSGFVVAIVLFMVFAFLNSLFEGKVVAKLPFVPFRIIQKMSHRGLSGNDMTDCSMAFLYLLCSMSIRTNLQKFLGFSPPRG 173
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BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A834YYW8_9MAGN (Calcium load-activated calcium channel n=2 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YYW8_9MAGN)

HSP 1 Score: 109 bits (272), Expect = 1.800e-26
Identity = 67/179 (37.43%), Postives = 101/179 (56.42%), Query Frame = 1 
Query:   19 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKGMKEPSPFAELSAP 555
            LAV+ +S  TA   EA SW ++YR   Y+ L+  I     D   KK E ++  D   KK K++++  R+E  L ++S++L      S  +VA+ + VV   +   F G  VAKLPFVP S++Q +SHR L G+DPTDCS+AF++ LC   ++ N+ K +G   P+G    +    L  P
Sbjct:   14 LAVVGISICTAFLCEAISWLLIYRTSSYKSLRSSI-----DKASKKLESMKTLDKPSKKSKTKKM-DRVETSLKESSRDLSFSKFKSGAVVALVLFVVFGLLNSLFEGKPVAKLPFVPASIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAANAAGLFPLPDP 186
[Close]
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A2C9V7M7_MANES (Calcium load-activated calcium channel n=3 Tax=rosids TaxID=71275 RepID=A0A2C9V7M7_MANES)

HSP 1 Score: 108 bits (270), Expect = 3.870e-26
Identity = 61/166 (36.75%), Postives = 96/166 (57.83%), Query Frame = 1 
Query:   19 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 516
            L V+A+S  TA+  EA SW ++YR   Y+ LK  I+   + +E  K E  ++T  + K KK    + R+E  L ++S++L      S  +VA+ + +V   +   F G VVAKLPF P  ++  +SHR L G+D TDCS+AF++ LC   ++ N+ K +G   P+G
Sbjct:   16 LTVVAISICTAVVCEAISWILIYRTNSYKSLKSSIDKASKKLETMKTETAKVTIKKSKTKK----IDRVETSLKESSRDLSLFKFKSGAVVALVLFIVFGLLNSLFEGKVVAKLPFKPIGIVMKMSHRGLQGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 177
[Close]
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A6P4BNF6_ARADU (Calcium load-activated calcium channel n=8 Tax=Fabaceae TaxID=3803 RepID=A0A6P4BNF6_ARADU)

HSP 1 Score: 108 bits (269), Expect = 5.040e-26
Identity = 63/166 (37.95%), Postives = 95/166 (57.23%), Query Frame = 1 
Query:   19 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 516
            L V+ +S  TA+  EA SW ++YR   Y+ L+  I+   + +E  K E  +I   + K KK    + R+E  L ++S++L      S  +VA+ + VV   +   F G VVAKLPF PF L+  +SHR L G DPTDCS+AF++ LC   ++ N+ K +G   P+G
Sbjct:   14 LTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTESNKINIKKSKTKK----IDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGSDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRG 175
[Close]
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A118JTC9_CYNCS (Calcium load-activated calcium channel n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JTC9_CYNCS)

HSP 1 Score: 108 bits (269), Expect = 5.180e-26
Identity = 59/173 (34.10%), Postives = 96/173 (55.49%), Query Frame = 1 
Query:   19 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKGMKEPSPF 537
            L +  +S  TA+  EA SW ++YR+  Y+ LK  I+   + +E  K +   +  S+ KK      + R+E  L ++S++L      S  +VA+ +  V   +   + G  VAKLPF+P  ++Q +SHR L G+DPTDCS+AF++ LC   ++ N+ K +G   P+G     PF
Sbjct:   15 LTIAGISFFTAIVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKTDSTALRKSKTKK------IDRVETSLKESSRDLSLFKFKSGAVVALILFAVFGFLNSLYEGKAVAKLPFIPLRIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGPF 181
[Close]
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A2P5C5L7_TREOI (Calcium load-activated calcium channel n=1 Tax=Trema orientale TaxID=63057 RepID=A0A2P5C5L7_TREOI)

HSP 1 Score: 107 bits (268), Expect = 7.680e-26
Identity = 63/167 (37.72%), Postives = 96/167 (57.49%), Query Frame = 1 
Query:   19 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEP-VRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 516
            L V+ +S  TA+  EA SW ++YR   Y+ L+  I+   + +E  K E   +I   + K KK    + R+E  L ++S++L      S  +VA+ + VV   +   F G VVAKLPF PF L+  +SHR L G+DPTDCS+AF++ LC   ++ N+ K +G   P+G
Sbjct:   16 LRVVGISICTAVVCEAISWILIYRTNSYKSLRSSIDKAAKKLENMKTETSAKIAAKKSKTKK----IDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRG 178
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G127_ECTSI1.920e-8370.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2J6LTV4_LACSA1.090e-2738.51Calcium load-activated calcium channel n=2 Tax=Lac... [more]
A0A0A0LGX0_CUCSA2.420e-2737.35Calcium load-activated calcium channel n=7 Tax=fab... [more]
W9SNZ3_9ROSA4.800e-2737.95Calcium load-activated calcium channel n=7 Tax=fab... [more]
A0A1S4CK71_TOBAC1.760e-2637.95Calcium load-activated calcium channel n=4 Tax=Nic... [more]
A0A834YYW8_9MAGN1.800e-2637.43Calcium load-activated calcium channel n=2 Tax=Tet... [more]
A0A2C9V7M7_MANES3.870e-2636.75Calcium load-activated calcium channel n=3 Tax=ros... [more]
A0A6P4BNF6_ARADU5.040e-2637.95Calcium load-activated calcium channel n=8 Tax=Fab... [more]
A0A118JTC9_CYNCS5.180e-2634.10Calcium load-activated calcium channel n=1 Tax=Cyn... [more]
A0A2P5C5L7_TREOI7.680e-2637.72Calcium load-activated calcium channel n=1 Tax=Tre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10330contigL-elsbetiae_contig10330:1235..6045 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score257.3
Seed ortholog evalue5.8e-66
Seed eggNOG ortholog2880.D7G127
Preferred nameTMCO1
KEGG koko:K21891
KEGG TC1.A.106.1
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006983,GO:0006984,GO:0007154,GO:0007165,GO:0008150,GO:0008324,GO:0009607,GO:0009987,GO:0012505,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0019725,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0023052,GO:0030001,GO:0030003,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032469,GO:0033554,GO:0034220,GO:0034976,GO:0042175,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071216,GO:0072503,GO:0072507,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098827
EggNOG free text desc.endoplasmic reticulum calcium ion homeostasis
EggNOG OGsKOG3312@1,KOG3312@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Ec32 ortholog descriptionUncharacterised conserved protein UCP023322, transmembrane eukaryotic
Ec32 orthologEc-27_001280.1
Exons6
Model size606
Cds size585
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815261.5029461-CDS-L-elsbetiae_contig10330:1234..12981622815261.5029461-CDS-L-elsbetiae_contig10330:1234..1298Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 1235..1298 +
1691682803.2220213-CDS-L-elsbetiae_contig10330:1234..12981691682803.2220213-CDS-L-elsbetiae_contig10330:1234..1298Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 1235..1298 +
1622815261.5159805-CDS-L-elsbetiae_contig10330:2059..21371622815261.5159805-CDS-L-elsbetiae_contig10330:2059..2137Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 2060..2137 +
1691682803.2327015-CDS-L-elsbetiae_contig10330:2059..21371691682803.2327015-CDS-L-elsbetiae_contig10330:2059..2137Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 2060..2137 +
1622815261.5252457-CDS-L-elsbetiae_contig10330:3103..32931622815261.5252457-CDS-L-elsbetiae_contig10330:3103..3293Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 3104..3293 +
1691682803.2408843-CDS-L-elsbetiae_contig10330:3103..32931691682803.2408843-CDS-L-elsbetiae_contig10330:3103..3293Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 3104..3293 +
1622815261.5350134-CDS-L-elsbetiae_contig10330:4132..42381622815261.5350134-CDS-L-elsbetiae_contig10330:4132..4238Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 4133..4238 +
1691682803.2489488-CDS-L-elsbetiae_contig10330:4132..42381691682803.2489488-CDS-L-elsbetiae_contig10330:4132..4238Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 4133..4238 +
1622815261.5445504-CDS-L-elsbetiae_contig10330:5357..54321622815261.5445504-CDS-L-elsbetiae_contig10330:5357..5432Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 5358..5432 +
1691682803.2632687-CDS-L-elsbetiae_contig10330:5357..54321691682803.2632687-CDS-L-elsbetiae_contig10330:5357..5432Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 5358..5432 +
1622815261.5538838-CDS-L-elsbetiae_contig10330:5952..60241622815261.5538838-CDS-L-elsbetiae_contig10330:5952..6024Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 5953..6024 +
1691682803.273126-CDS-L-elsbetiae_contig10330:5952..60241691682803.273126-CDS-L-elsbetiae_contig10330:5952..6024Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10330 5953..6024 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815261.5655897-UTR-L-elsbetiae_contig10330:6024..60451622815261.5655897-UTR-L-elsbetiae_contig10330:6024..6045Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10330 6025..6045 +
1691682803.2814322-UTR-L-elsbetiae_contig10330:6024..60451691682803.2814322-UTR-L-elsbetiae_contig10330:6024..6045Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10330 6025..6045 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10330.370.1prot_L-elsbetiae_contig10330.370.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10330 1235..6024 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10330.370.1

>prot_L-elsbetiae_contig10330.370.1 ID=prot_L-elsbetiae_contig10330.370.1|Name=mRNA_L-elsbetiae_contig10330.370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp
MGLTMCLAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEK
KKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVF
VMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIF
ALCQAGVKGNIAKLVGVGQPKGMKEPSPFAELSAPADEGHAKDQ*
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mRNA from alignment at L-elsbetiae_contig10330:1235..6045+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10330.370.1 ID=mRNA_L-elsbetiae_contig10330.370.1|Name=mRNA_L-elsbetiae_contig10330.370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4811bp|location=Sequence derived from alignment at L-elsbetiae_contig10330:1235..6045+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGCTCACTATGTGTTTGGCGGTGATTGCCCTTTCGGCATTGACGGC
CCTGTTCGCTGAAGGTGAGGCTCCTGCTTCAGACGAATACGCCTGGCTTT
CGAGTTTTGCGGGAGAGTGCGTTTATCTGCTGTGTCTCGTGGCTCGGCTC
CTCGATGTCTTGTATATTGCCCTCCTTCTGTCCATCATATGTTGGTGTAC
TCTCCATCCACTTGACATCGAGGGTGGAAAGTCCTGCTGGGGCTTGTAGT
TAGACTTTTATCAGAGAGAGAGCGCTGTTTTGGTTTGTTTCGCGTGCTTC
GTGTTATCCGCAGAAGCCGTTTTCGAACCAACGTCGACCAATACAACAGC
AGACAGCTCTCGCTCTTTCGCACCCTGAACCCTGAAAGAGCCCAAACGGG
CTCTGGGACGTATCCTGCGTTGCACATGACAACCATGCCCAGCGTCTCTC
TCTCTCTCCCTCTTGAATCGCAGCGGGGCAAGCTTATTGACCCTGAAATA
GGAGCAGAATTTATATTTGCACTCCGCCAAGTGGACGACCCACCCTGCCG
CCGCCTTCTCTCTGGCCAAGTACTGCTACAAGTACTGCTGTTGTGGGGCT
CCTTACGGCAGAGTGTCCCGTTATTTGCCCTCGTACCGCAGTAAGTTGAA
ACGTTAGCTATTGATTTAAATATTTGGTGTTTATTTTTTTCAAATAATCT
TTGCCTGCCGCCTGCCCCCCCCGCCCCCCCCACCCACCCCGCCCACCTCG
TCGACCTCCCTGTTTGTCCCTCTCGCTCTTCTCTCTTCTCTCTCGTCTCG
TTCTCTGCCCTCTTTTCAATTCAAGCCTTCTCCTGGTACATGGTGTACAG
AAAACCCGAGTACCAGAAGCTGAAGCGTCACATCGAGATGCTCGTCAGAG
ACAGTGAGTGCCGAAACATGAAGTAGTAAATAGTGCATACATACATACAT
CTGCTCTACCTCTACTGTACAATACCAGATCGCGACCGCTGCCGACTACG
TCAGTACCACACCGTACTTGGCTGTAGAGGCAATTCGCAGTCCTGGGGGG
GGGCGAGGCAAAAGCGAGGACGAGAGACGAAAGGCAAAGAGAAAAATAAC
ACACTCAAGAGCTGAATTCCATGATGGATGCTCTCATGATATTTAGGCAT
ACGAACTTTTGGACGCCCGTCAGCTCGGGAAAGAAAACTCCCAGAAAAAT
CCCAGAAACGGGGAGGAGCAAGCGTACCGTCGACCGGTTCACGGAAGATG
GTCGACGTAACTAACACCGCAAAGGCACCAGACGTCTCCACCCGACAAAT
CACACCATCAGTTCTAAACCGCTTGTTTCCGAAGCGCGTTCCAGCCTCTC
CCGCCCTTCCTTCTTCCTACATGGGTAACAAATACCCACACACGTCCCGA
AAACTCCGCGCACGCCTGCGTGTATTTCTCAAAAAATAATCAATGAATCA
GAGATGGAACGTAACCCACACTAGAGCAAGGACTCGATACGGGTTTCAAT
CGGTATCCCATACAGTAGTGACGTCATATTTGGCGAAACAAGCAGAAAAA
CAAACCTAAAACATCAGAAGAGTTCAAAATTTCCCCTGCAAAGATTAAGA
TTTGCGAGTTCGACCGACAAGTATTACGGCGGGTAGATGCCCGCCATGAC
GCCGTGTTGTCAATGTTGTCATCTACTTCAAAGTAGGGACACATCGCATT
GTTGAACTAAATCAAAATGCTGGTTTAATATACATATGTGGCTTACTGCT
CCGACCAAGCAGATAGATACATACATACTCCTATGTCAATCGGCTTCCTT
CCTTTCCCACACACCGCCGTCCACCCTCGTTATCATCTCGCTCTGTGTGT
GCGGTGCGGTGCGGTGCAGTCGAGAAGAAGAAGGCGGAGCCGGTGCGCAT
CACGGACAGCGAGGACAAGAAGAAGAAGAGCCAGCGGGTGGTGAGCCGCC
TGGAGAAGGACCTCGCGGACGCCTCGAAGGAGCTGCAGACCCTGGCCACG
CCCAGCAAGATGATGGTCGCCGTCTTCGTCATGGTGGTGATGTTCAGCGT
GCAGAAGAGGTGCGAGGCGGGAGGGCGGGAGGGCAGGCGGACACTACATG
CATGTGTACATAGTGGGCGGGCGACGGGGTGATCCTGTCCTGTCGGTAGC
TGCTTGCTGTGTGTGTGTGTGTGTGTAGCGAGCGGCGCTTGGCTGGCTTT
CGTCTAGGCTTCCGCAAAGCTCTTCCTTGTTGCTGTGTTGTACGCAGCGA
GCGGCGTCTGGCTGGCTTTCGTCTAGGCTTCCGCAAGGCTCTTCCTTGTT
GCTGTGTTGTGTGTAGCGCGCGGCGTCTGGCCGGCTTTCGTTAAGGCTTC
CGCAAGGCTCTTCCTTGTTGCTGTGTTGTGTGTAGCGCGCGGCGTCTGGC
TGGCTTTCGTTAAGGCTTCCGCAAAGCTCTTCCTGCTGTGTGTGTATGTA
GCGAGCGGCGTTTGGCTGGCTTTCGCAAGGCTTCCGCAAAGCTTTTCCTT
CCACACCGTCAGCGGGTCTGCCCACGTTCAACCTGTGTAAAAATCGTTCC
AGGAGGGAGCACTACTACTATGGTATTTAGGTAGACATAGTACGTTACCC
TCTCTCACCGCCGCCCCAGACCACACTTTTTTTACTCGGCTCCCTTTGTA
GGACTCTGAAAGGCGCGCGCGCGCGCGCGTTCCCCACCCCGCTCGTATCT
CTTCTTCTGGCTCCCCAGATATTTTACCCCCGTCTCTCTTAATTATTTCT
GTCTACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCCATACTACGGCC
ACAGCCTTCTAATGTTACCGTTTCTGATTGTACCTCTTGTCTCCGTGTGC
GCGTGTGTTTCATGAACCGCATGTTCCGTGCCTTTTCTGGAAAACAAGTT
TTGCGGGGATTGTGGTGGCGAAGCTGCCGTTCGTCCCGTTTTCGCTGCTC
CAAAACATCAGCCACAGGAAGCTGGATGGAGAAGACCCCACGGACTGCTC
TGTGGTAAGAACGGGAGTGTTCATCTCCATACGCAGGCGCCCGCGGCGGC
AGGGTTTTGGTTTGCCCCTTGCTCTTGAGCGTTTCGCTTTGCCGTGTACA
ATGGTGGAGAGTTTGTTATGGCACATCGGTACGCTTGGGCCTCTCTGGTG
GCAGCATGTCAACATATTTGAGTAAAGCACCTCCGAGTATCTAAGGAATC
GTGATCGCGATGGAGTACAGGGGGGCGCTTCGCAGCGGGCCGCCACTATA
ATGAAGTATCTATGTAGATAAGTGCCGAGTGTTTTAAGGGTGGTGCGTGC
ACCCAACAAAAGGCGGACACCTCCACACGGTCCTGGAGGCGCGGTTTCCT
CGCTGGCCAGTTCTGGTTTTACTGTATGGTTCGACGTGGTGTGCCACACC
GGTGCAATCAAACTCGCAGTTCATTCATCAGGGCAGGAAAAAACGCAACC
TAGCCCGTTCTCTGTATCAACGTCTTGTACCTAGCCTAGGAGAGTGTTCA
TGTTCCAAAAAAATATGGGATGTTAAGAAGGATAAAGTTCGTCTACAAGC
ACCCCCCCCCTGGAACGACATTTTTTTCACAGGGTGGACGTAGACCGCCG
ATGTTTTGTACAAACTATTTTTCTTAAAACAAGTAGACAGGACGCCAGAG
GTGCGAAACGCCCGAACCCGTGCAGAGAGTGCGCCCCATCGAGCAACCGA
GCCGTTCACGGCACGAGTGGTTGTTGCACTGCACTGCGGTACGCACGAGT
ACGCGGCGGTAGGGTTTGGTTGGGTTCTTGTGCTGCTGTTTTTTTTTTTG
CCACACGCACTTTGTTTTTCTCTCTTTCCGTGTTTTGCGGGCGACTGTTT
ATATAGAAGTACGCACTTAAACATGTGTGACCCCGGTTGGGGTCGTCCAG
CTAGTCGTAGTGGAGGAAGGGGGGCCAGTCGACGAATAAGCCAATAACGG
GAGGGAACAAAACAAAATGCCAGGTGGCTGGACGCGAAACCCGTCGCTGC
CCGCCACACCATCGCGCACCACGCACAGCAGCTGGTTCTCTTTGTTTTCC
TAAAATTAACACTGCTGTGTTGTCTTTTAATTGAGCTCGTTTCCTCTTCC
GATGCCCCTTGCTACTTTTCCAGGCGTTTATATTTGCTCTGTGTCAGGCC
GGGGTAAAGGGAAATATTGCGAAGCTTGTCGGCGTGGGCCAGCCGAAGGT
AAGGGTGAATAGATGGGGAGGGGGGGGGGGGTAGTGGATTGCGATGATGA
GTATCGGCGGAACCTGTTGCAAACCCGGCATCCATACTTCTAACTGTAGG
AGAGCGAAATATTGCGACATCGAGATATCTCTAATGGTTGTGAACAAGAG
GTTTTTTATTTTCCTTTTTTTTTAGGGAAACCAACTCCTGGTTTCCATGA
GTGCGTGTGGCCAGGCCCTTGTTGTTCGCACCACGGCGGTGTGGAGCTAA
CGGGCAGAAGGAATCACGCGGTGTTGCCCCGTTACATGTCGTCCCACCCT
TTGATATGCTCGCTTCGTCTCGCGTGACCTATTGAAAACGTGAACGTTCA
AGCATACAGCAGTGTGTAGCCTTGGTCCTGTTGGTGGGCTTTCCGCGTAC
CCCCCCACCCACCCACCCACCCACCCACCTTACGAGTCTACCAACTACGG
CATGTAGGACCATTGAGTGCAACCCCTCCCCGCCCACAACCTCTGGACAC
CGTTTCACAATATACCAGGGGATGAAGGAGCCAAGCCCATTCGCAGAGTT
GAGTGCACCAGCCGATGAGGGTCACGCCAAGGACCAATGAAACGGCGGGG
GCACAGCGAGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10330:1235..6045+

>mRNA_L-elsbetiae_contig10330.370.1 ID=mRNA_L-elsbetiae_contig10330.370.1|Name=mRNA_L-elsbetiae_contig10330.370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1170bp|location=Sequence derived from alignment at L-elsbetiae_contig10330:1235..6045+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGCTCACTATGTGTTTGGCGGTGATTGCCCTTTCGGCATTGACGGC
CCTGTTCGCTGAAGATGGGGCTCACTATGTGTTTGGCGGTGATTGCCCTT
TCGGCATTGACGGCCCTGTTCGCTGAAGCCTTCTCCTGGTACATGGTGTA
CAGAAAACCCGAGTACCAGAAGCTGAAGCGTCACATCGAGATGCTCGTCA
GAGACACCTTCTCCTGGTACATGGTGTACAGAAAACCCGAGTACCAGAAG
CTGAAGCGTCACATCGAGATGCTCGTCAGAGACATCGAGAAGAAGAAGGC
GGAGCCGGTGCGCATCACGGACAGCGAGGACAAGAAGAAGAAGAGCCAGC
GGGTGGTGAGCCGCCTGGAGAAGGACCTCGCGGACGCCTCGAAGGAGCTG
CAGACCCTGGCCACGCCCAGCAAGATGATGGTCGCCGTCTTCGTCATGGT
GGTGATGTTCAGCGTGCAGAAGAGTCGAGAAGAAGAAGGCGGAGCCGGTG
CGCATCACGGACAGCGAGGACAAGAAGAAGAAGAGCCAGCGGGTGGTGAG
CCGCCTGGAGAAGGACCTCGCGGACGCCTCGAAGGAGCTGCAGACCCTGG
CCACGCCCAGCAAGATGATGGTCGCCGTCTTCGTCATGGTGGTGATGTTC
AGCGTGCAGAAGAGTTTTGCGGGGATTGTGGTGGCGAAGCTGCCGTTCGT
CCCGTTTTCGCTGCTCCAAAACATCAGCCACAGGAAGCTGGATGGAGAAG
ACCCCACGGACTGCTCTGTGTTTTGCGGGGATTGTGGTGGCGAAGCTGCC
GTTCGTCCCGTTTTCGCTGCTCCAAAACATCAGCCACAGGAAGCTGGATG
GAGAAGACCCCACGGACTGCTCTGTGGCGTTTATATTTGCTCTGTGTCAG
GCCGGGGTAAAGGGAAATATTGCGAAGCTTGTCGGCGTGGGCCAGCCGAA
GGCGTTTATATTTGCTCTGTGTCAGGCCGGGGTAAAGGGAAATATTGCGA
AGCTTGTCGGCGTGGGCCAGCCGAAGGGGATGAAGGAGCCAAGCCCATTC
GCAGAGTTGAGTGCACCAGCCGATGAGGGTCACGCCAAGGACCAATGAGG
GATGAAGGAGCCAAGCCCATTCGCAGAGTTGAGTGCACCAGCCGATGAGG
GTCACGCCAAGGACCAATGA
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