prot_L-elsbetiae_contig15178.3698.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15178.3698.1
Unique Nameprot_L-elsbetiae_contig15178.3698.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length139
Homology
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BLAST of mRNA_L-elsbetiae_contig15178.3698.1 vs. uniprot
Match: D8LHX8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHX8_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 2.670e-46
Identity = 72/100 (72.00%), Postives = 83/100 (83.00%), Query Frame = 0 
Query:    1 GSVSGGAITCTLCDQVKPVSEYSRNQVSRFGREVCQRCLMREGAAAAPPTHIAPAAGEGFVRCVACCQLKTTSAFGVNQLRRRAGIERCMSCVENDHGSV 100
            G+ + GAITCT+C   KP SEYSRNQ++R  REVCQ CLM +G  AAPP+ +APAAGEG VRCVACCQ+KTTS+FG+NQLRRRAGIERCM CVE D GSV
Sbjct:    3 GASASGAITCTVCGVRKPASEYSRNQLARSSREVCQVCLMSDGTVAAPPSRVAPAAGEGVVRCVACCQVKTTSSFGINQLRRRAGIERCMLCVEKDLGSV 102
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15178.3698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHX8_ECTSI2.670e-4672.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024630Stc1 domainPFAMPF12898Stc1coord: 8..39
e-value: 3.6E-5
score: 24.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15178contigL-elsbetiae_contig15178:169..585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15178.3698.1mRNA_L-elsbetiae_contig15178.3698.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15178 169..585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15178.3698.1 ID=prot_L-elsbetiae_contig15178.3698.1|Name=mRNA_L-elsbetiae_contig15178.3698.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp
GSVSGGAITCTLCDQVKPVSEYSRNQVSRFGREVCQRCLMREGAAAAPPT
HIAPAAGEGFVRCVACCQLKTTSAFGVNQLRRRAGIERCMSCVENDHGSV
VLCNACQTQKPFTDFSKKQLACKPGRSRCKACIASGPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024630Stc1