mRNA_L-elsbetiae_contig15129.3669.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15129.3669.1
Unique NamemRNA_L-elsbetiae_contig15129.3669.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: D8LRT5_ECTSI (Serine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT5_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 1.520e-110
Identity = 169/185 (91.35%), Postives = 175/185 (94.59%), Query Frame = 2 
Query:  248 QLPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLDAL 802
            QLP+SLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVK TTPEDS NEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQ A+REISSCSNCQDFQARRM LRYREP PEAKKKKSRN+ CHTINGSGVAVGRALVAVLENYYNP DGSV IPDVLR YMGG EKL+++
Sbjct:  323 QLPMSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQGAFREISSCSNCQDFQARRMNLRYREPTPEAKKKKSRNLPCHTINGSGVAVGRALVAVLENYYNPIDGSVSIPDVLRPYMGGAEKLESV 507
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BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A7S2UWA1_9STRA (Serine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA1_9STRA)

HSP 1 Score: 271 bits (694), Expect = 3.630e-83
Identity = 132/182 (72.53%), Postives = 154/182 (84.62%), Query Frame = 2 
Query:  251 LPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLD 796
            LP+SL  LTPCFRAEAGS G+DTRGLLRQHQF KVELVK+ TPE S + HE LT HAEA L+ALKLP+R+V LCSGDIGFGAR+CYDLEVW+PGQ  +REI+SCSNC DFQARRM LRYR  + E KKKK+  V CHT+NGSG+AVGR LVA+LENYYNP DGSV +P+VL+ YMGG +K++
Sbjct:  313 LPISLTGLTPCFRAEAGSYGQDTRGLLRQHQFHKVELVKICTPEQSFDAHEELTAHAEACLQALKLPYRKVRLCSGDIGFGARMCYDLEVWLPGQEMFREIASCSNCADFQARRMGLRYR--VVEGKKKKT--VFCHTMNGSGLAVGRTLVAILENYYNPEDGSVAVPEVLQPYMGGQKKIE 490
[Close]
BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: R1CZV8_EMIHU (Serine--tRNA ligase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZV8_EMIHU)

HSP 1 Score: 265 bits (676), Expect = 9.400e-81
Identity = 135/204 (66.18%), Postives = 157/204 (76.96%), Query Frame = 2 
Query:  188 PCVVKKSNLQNIKVSPSTALQLPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLDA 799
            P  V  +NL   ++    AL  P+S V  TPCFRAEAGSAGRDTRGL RQHQFLKVELVK+ TPE S  +H+AL +HAE  L+AL+LP+R+V LC+GDIGF ARLCYDLEVW+PGQ  YREISSCSNC  FQARRM LRYR P P+   KK +   CHT+NGSG+AVGRALVAVLENY N ADGSV +P+ LR YMGG+E + A
Sbjct:  271 PPQVPLTNLHAGEILDEAAL--PISYVGATPCFRAEAGSAGRDTRGLFRQHQFLKVELVKICTPEQSDAQHQALVEHAERCLRALQLPYRKVLLCAGDIGFSARLCYDLEVWLPGQGRYREISSCSNCGSFQARRMGLRYR-PAPDGSGKKRKPEFCHTLNGSGLAVGRALVAVLENYQN-ADGSVTVPEALRPYMGGLEVISA 470
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BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A835YK02_9STRA (Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK02_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.320e-80
Identity = 132/188 (70.21%), Postives = 153/188 (81.38%), Query Frame = 2 
Query:  251 LPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAK-------KKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKL 793
            LP++  ALTPCFRAEAGS GRDTRGLLRQHQFLKVELV+VT+   S +EHEALT HAE +L+ LKLP+R++ LCSGDIGF AR+CYDLEVW+PGQ A+REISSCSNC DFQARRM LRY+   P A+       K K   + CHTINGSGVAVGRALVAVLENY+NP DG+V +P+VLR YMGG+ KL
Sbjct:  346 LPLAFAALTPCFRAEAGSYGRDTRGLLRQHQFLKVELVRVTSAASSADEHEALTGHAEKILQLLKLPYRKMRLCSGDIGFSARMCYDLEVWLPGQKAFREISSCSNCGDFQARRMGLRYKGKDPYAEEGKGGKGKGKQTTLACHTINGSGVAVGRALVAVLENYFNPKDGTVTVPEVLRPYMGGLLKL 533
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BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A7S2DLF3_9EUKA (Serine--tRNA ligase n=2 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DLF3_9EUKA)

HSP 1 Score: 256 bits (655), Expect = 1.660e-80
Identity = 125/182 (68.68%), Postives = 145/182 (79.67%), Query Frame = 2 
Query:  248 QLPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKL 793
            QLP+S  A TPCFRAEAGS GRDTRGL RQHQF KVELVK+ TPE +  +H  L QHAEA LKAL+LP+R++ LCSGDIGF +RLCYDLEVW+PGQ  +REISSCSNC DFQARRM+LRYR    + K K  + V CHT+NGSG+AVGR LVA+LENY N  DGS+ IP+VLR YMGG E +
Sbjct:   67 QLPLSYTAFTPCFRAEAGSHGRDTRGLFRQHQFHKVELVKICTPEQADEQHHQLVQHAEACLKALELPYRKMRLCSGDIGFSSRLCYDLEVWLPGQGRFREISSCSNCADFQARRMSLRYRPSERDEKGKAKKPVFCHTMNGSGLAVGRTLVAILENYQNE-DGSLTIPEVLRPYMGGKETI 247
[Close]
BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A7S3Y0F1_HETAK (Serine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0F1_HETAK)

HSP 1 Score: 259 bits (662), Expect = 2.290e-78
Identity = 127/183 (69.40%), Postives = 147/183 (80.33%), Query Frame = 2 
Query:  251 LPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLDA 799
            LP++  A TPCFRAEAGS GRDTRGLLRQHQF KVELVK+ T E +  EHE LT+ AE  L+ L LP+R++ LCSGDIGFGARLCYDLEVW+PGQ A+RE++SCSNC DFQ RRM LRYR      KKK   N   HT+NGSG+AVGRALVAVLENYYNP DGS+ IP+VLR YMGG+EK++A
Sbjct:  316 LPLAFAACTPCFRAEAGSYGRDTRGLLRQHQFNKVELVKICTEEQAKAEHEKLTEDAEKALQLLGLPYRKMRLCSGDIGFGARLCYDLEVWLPGQEAFREVASCSNCADFQGRRMNLRYRTVDENGKKK---NAFAHTMNGSGLAVGRALVAVLENYYNPEDGSLTIPEVLRPYMGGLEKIEA 495
[Close]
BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A1E7FP98_9STRA (Serine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FP98_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.740e-77
Identity = 131/181 (72.38%), Postives = 146/181 (80.66%), Query Frame = 2 
Query:  251 LPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKL 793
            LP+S VA TPCFRAEAGS+GRDT+GL+R HQF KVELVK+TT + S  EHE LT HAEA L+ L+LP+R+V LCSGDIGF AR CYDLEVW+PG A YREISSCSN  DFQARRMALR+R P P AK K     LCHTINGSG+AVGR LVA+LENY  P DGSV +PDVLR YMGGVE L
Sbjct:  223 LPISYVACTPCFRAEAGSSGRDTKGLIRTHQFQKVELVKITTADKSEEEHELLTSHAEACLQKLELPYRKVRLCSGDIGFSARHCYDLEVWLPGAAEYREISSCSNTGDFQARRMALRFR-PEPPAKPKPE---LCHTINGSGLAVGRTLVAILENYQLP-DGSVVVPDVLRPYMGGVEIL 398
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BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A8J5X803_DIALT (Serine--tRNA ligase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X803_DIALT)

HSP 1 Score: 256 bits (655), Expect = 3.340e-77
Identity = 135/209 (64.59%), Postives = 162/209 (77.51%), Query Frame = 2 
Query:  197 VKKSNLQNIKVSPSTALQLPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYRE----PMPEAKKKKSRNV-----LCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLD 796
            V  +NL   ++ P  +L  P++ VALTPCFRAEAGS GRDTRGL+RQHQF KVELV++T   DS  +HEALT+HAEA L+AL+LP+RR+ LCSGDIGF AR CYDLEVW+PGQ A+REISSCSNC DFQARRMALRYR     P  + +KK  +       LCHTINGSG+AVGRALVAVLENY  P DGSV +P+VLR YMGG+ +++
Sbjct:  299 VPLTNLLAGEILPEASL--PLAFVALTPCFRAEAGSYGRDTRGLIRQHQFAKVELVRITAAHDSDAQHEALTRHAEACLEALELPYRRMRLCSGDIGFSARHCYDLEVWLPGQGAWREISSCSNCGDFQARRMALRYRPAAAAPDGDGQKKGGKAAAPKPTLCHTINGSGLAVGRALVAVLENYAQP-DGSVIVPEVLRPYMGGLARIE 504
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BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A8J9X4W0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X4W0_PHATR)

HSP 1 Score: 253 bits (647), Expect = 8.950e-77
Identity = 128/183 (69.95%), Postives = 146/183 (79.78%), Query Frame = 2 
Query:  251 LPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLDA 799
            LP+S VA TPCFRAEAGS GRDT+GL+R HQF KVELVK+TT + S  EHE LT HAEAVL++L+LP+R+V LCSGDIGF AR CYDLEVW+PG   +REISSCSN  DFQARRM+LRYR    +   KK + VLCHTINGSG+AVGR LVAVLENY  P DGSV +P+VLR YMGG E L A
Sbjct:  258 LPLSYVAWTPCFRAEAGSYGRDTKGLIRTHQFQKVELVKITTADTSDAEHETLTAHAEAVLRSLELPYRKVRLCSGDIGFSARHCYDLEVWLPGAGEFREISSCSNTGDFQARRMSLRYRPKPADGSNKKLKPVLCHTINGSGLAVGRTLVAVLENYQTP-DGSVVVPEVLRPYMGGKEILKA 439
[Close]
BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: W7TYV7_9STRA (Serine--tRNA ligase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYV7_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.210e-76
Identity = 133/190 (70.00%), Postives = 149/190 (78.42%), Query Frame = 2 
Query:  242 ALQLPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMP-----EAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLD 796
            A QLP+S V LTPCFRAEAGS GRDT+GLLRQHQF KVELVK+TTPE S  EHEALT+ AE  L+ L+LP+R+V LCSGDIGF A  CYDLEVW+P Q  YREI+SCSNC+DFQARRMALRYR P P     EA K K   VLCHTINGSG+AVGR LVA+LENY    DGSV +P+VL  YMGG  KL+
Sbjct:  340 ATQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSDAEHEALTRDAEECLRLLELPYRKVRLCSGDIGFAAAHCYDLEVWLPAQQTYREIASCSNCRDFQARRMALRYR-PAPLGAAKEAGKGKKSTVLCHTINGSGLAVGRTLVAILENYQEE-DGSVRLPEVLVPYMGGTTKLE 527
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRT5_ECTSI1.520e-11091.35Serine--tRNA ligase n=1 Tax=Ectocarpus siliculosus... [more]
A0A7S2UWA1_9STRA3.630e-8372.53Serine--tRNA ligase n=1 Tax=Fibrocapsa japonica Ta... [more]
R1CZV8_EMIHU9.400e-8166.18Serine--tRNA ligase n=2 Tax=Emiliania huxleyi TaxI... [more]
A0A835YK02_9STRA1.320e-8070.21Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2DLF3_9EUKA1.660e-8068.68Serine--tRNA ligase n=2 Tax=Haptolina brevifila Ta... [more]
A0A7S3Y0F1_HETAK2.290e-7869.40Serine--tRNA ligase n=1 Tax=Heterosigma akashiwo T... [more]
A0A1E7FP98_9STRA2.740e-7772.38Serine--tRNA ligase n=1 Tax=Fragilariopsis cylindr... [more]
A0A8J5X803_DIALT3.340e-7764.59Serine--tRNA ligase n=1 Tax=Diacronema lutheri Tax... [more]
A0A8J9X4W0_PHATR8.950e-7769.95Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
W7TYV7_9STRA1.210e-7670.00Serine--tRNA ligase n=3 Tax=Monodopsidaceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15129contigL-elsbetiae_contig15129:1971..4290 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.5
Seed ortholog evalue1.9e-92
Seed eggNOG ortholog2880.D8LRT5
KEGG rclassRC00055,RC00523
KEGG koko:K01875
KEGG ReactionR03662,R08218
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categorysignal peptide
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.seryl-tRNA aminoacylation
EggNOG OGsCOG0172@1,KOG2509@2759
EC6.1.1.11
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons4
Model size1201
Cds size699
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15129.3669.1prot_L-elsbetiae_contig15129.3669.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15129 2367..4184 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815615.396297-UTR-L-elsbetiae_contig15129:1970..23661622815615.396297-UTR-L-elsbetiae_contig15129:1970..2366Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15129 1971..2366 -
1691682992.7710752-UTR-L-elsbetiae_contig15129:1970..23661691682992.7710752-UTR-L-elsbetiae_contig15129:1970..2366Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15129 1971..2366 -
1622815615.4615438-UTR-L-elsbetiae_contig15129:4184..42901622815615.4615438-UTR-L-elsbetiae_contig15129:4184..4290Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15129 4185..4290 -
1691682992.827735-UTR-L-elsbetiae_contig15129:4184..42901691682992.827735-UTR-L-elsbetiae_contig15129:4184..4290Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15129 4185..4290 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815615.4096007-CDS-L-elsbetiae_contig15129:2366..25451622815615.4096007-CDS-L-elsbetiae_contig15129:2366..2545Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15129 2367..2545 -
1691682992.7828774-CDS-L-elsbetiae_contig15129:2366..25451691682992.7828774-CDS-L-elsbetiae_contig15129:2366..2545Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15129 2367..2545 -
1622815615.428467-CDS-L-elsbetiae_contig15129:3336..35261622815615.428467-CDS-L-elsbetiae_contig15129:3336..3526Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15129 3337..3526 -
1691682992.795088-CDS-L-elsbetiae_contig15129:3336..35261691682992.795088-CDS-L-elsbetiae_contig15129:3336..3526Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15129 3337..3526 -
1622815615.4384189-CDS-L-elsbetiae_contig15129:3654..37381622815615.4384189-CDS-L-elsbetiae_contig15129:3654..3738Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15129 3655..3738 -
1691682992.8100202-CDS-L-elsbetiae_contig15129:3654..37381691682992.8100202-CDS-L-elsbetiae_contig15129:3654..3738Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15129 3655..3738 -
1622815615.449276-CDS-L-elsbetiae_contig15129:3938..41841622815615.449276-CDS-L-elsbetiae_contig15129:3938..4184Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15129 3939..4184 -
1691682992.8193686-CDS-L-elsbetiae_contig15129:3938..41841691682992.8193686-CDS-L-elsbetiae_contig15129:3938..4184Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15129 3939..4184 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15129.3669.1

>prot_L-elsbetiae_contig15129.3669.1 ID=prot_L-elsbetiae_contig15129.3669.1|Name=mRNA_L-elsbetiae_contig15129.3669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=233bp
MRQRKYQLICIISIQLLYHSWGRATRQPCVVKKSNLQNIKVSPSTALQLP
VSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEA
LTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREIS
SCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVA
VLENYYNPADGSVEIPDVLRAYMGGVEKLDAL*
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mRNA from alignment at L-elsbetiae_contig15129:1971..4290-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15129.3669.1 ID=mRNA_L-elsbetiae_contig15129.3669.1|Name=mRNA_L-elsbetiae_contig15129.3669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2320bp|location=Sequence derived from alignment at L-elsbetiae_contig15129:1971..4290- (Laminarionema elsbetiae ELsaHSoW15)
TTGCATCAGCTTCGTTGGCGCTTCTTCTTTCCAACGAACTTAACTATAGG
ATGATCGGAATAGTGTGCATACGCGAACAATAAAAAGTCCATAAGTTCCC
AGACTTATGAGACAGAGGAAGTATCAGTTGATTTGTATCATTTCGATTCA
GTTGCTCTACCATTCGTGGGGGAGAGCAACACGGCAACCTTGCGTAGTAA
AAAAGTCAAATCTGCAGAATATTAAGGTGTCTCCCTCGACCGCCTTGCAG
CTGCCGGTATCTTTAGTGGCTTTGACGCCTTGCTTCCGGGCCGAGGCAGG
ATCAGCGGGGCGGGATACACGCGGACTACTTCGCCAGCACCAATTTTTGA
AGGTAACACCAGCTGTAGGCAACTGGTAATCTTACACTGCGTCGAGCTGC
TGAACAACGGCAGTTAGAAGTTGGCGTCTTGGCATGTCCAGTTGCCGCCT
GCTCGCTACTATCTACGTGTTTGGTTTTAGTTGAGAGTAAAATAGGTATC
CAAAAACCACCGCCATTATTCCCCTTTTCGCCGTGCCGATGTGTCCTCAA
AGGTGGAACTCGTGAAGGTCACAACCCCGGAAGATAGCCACAACGAGCAC
GAGGCACTGACACAGCACGCAGAGGCAGTTTTGAAGGTGGGTACGCCATC
TCACATTTGATATCCTACACTGGTGTTGATCTTCAACGGGGGTAGTGACG
AACGGGAGGAAGTCCAAGCATGTCACAGCCGCTGACACTGAATTCCTCTG
TTTTTTCACGCCAGGCGCTCAAACTACCCTTTCGAAGAGTTTCTCTATGC
AGCGGCGACATTGGATTCGGTGCTCGCCTTTGCTACGACCTGGAAGTGTG
GATGCCCGGCCAAGCGGCCTACCGGGAAATATCATCGTGCAGCAATTGCC
AAGACTTCCAGGCGCGTCGCATGGCTTTACGCTATCGAGAGCCGATGCCA
GAAGGTAAGTTCAACACAATAACGTAAGCTCGTTTTTGTCCTGACCTGTG
CCCACGGGGGTTGTCTCTAAAGCGTAGCCAAGCCATATTATTTCCGGCAG
GCGTGGGTGGGGAGCGTGACTACAGATGCGGCCCGAACTTAAATTAAGAA
CTTGGCCAGAGTCTGAATTGTGTCAAAATTACAACTGGCCATAAGAACAG
GGCTCGGTGCCACTAAGAACCCACAGAGGTATAAAACTCGAGCTCTAGAT
AACAACCGGGGTCCACACGGTGTGTGGCTGGAAGATAAAGAACTTGGGTC
GTATGTAGATCACCTCACAAAGGTTGAATCCACAGGAGGGGGGCTGGGTG
ACCCTCAAAAATATCAAGCCGGGGGGATGCGTGTCGCTCAAAACATATTG
CCACGCTTACATCTACGTTCCTCCTCCTCCTTCGGTACCGGAGGCTCTGT
CTGTAAGAAGGGGGGTGATCACGTCTTTGCCCCGAGAACACGAACAAAAC
CCCGTTTTGGAGCAACGTGTGCCTGCTTGAAATAATAACTTTGGCGAATA
AGAACAGGTGCTCGGATTCTGGCAGCCAATAAAGCCTCGAAGGTTACTCA
ACATAAGCGGTTCTTGATTGAGTGCGGGCCGCATCTATATGCCCTCTGAC
GTTGACAGCAGTATTGTAGCAGTATTTTGACAAGCGAAGATATGAAATGC
TTCCAACAAATTTCGGGCCAAATAGTTGCTAACCCCGGTTAATCGACCAA
CTATTTTGCCGGATGGTTTCTCACGCACTCTGTGTCCTTCCTCAGCAAAG
AAAAAGAAGTCGCGGAACGTGTTGTGCCACACCATCAACGGATCAGGAGT
CGCGGTCGGTCGTGCGCTAGTGGCCGTGCTGGAGAACTACTACAACCCAG
CGGATGGGTCGGTTGAGATTCCAGATGTTCTTCGCGCTTACATGGGAGGC
GTTGAAAAGCTCGATGCTCTTTAATTTAATCCCAACGGTTACTGCGCATT
TGGAGCTTTGGATTTTTGCCGAGCAACTCGCAACCCAGCGGATGGGTCGG
TTGAGATTCCAGATGTTCTTCGCGCTTACGTGGGAGGCGTTGAAAAGCTC
GATGCTCTTTAATTTGAGGGGACGGGAAAAGGGGTACCCATTGATCAGTA
TATGCCTACTTCGAAGAATATCACATACCCCCGCTGAACATCACCCAGCC
TTTCTTGAAGTTTGTGTGGGCGTTCCAAAAACCTCAGCATATCAACCACC
CGTCACGCGCTTGAAATGGGAACTCCGCCCAATTTTGCTGTGCTACCCCT
CGAATATTCCACACTCTTCGAAAACAGCCGGGCTACATTCGCGTCGAGTC
CGTTTCTTGATTGGTGCAAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15129:1971..4290-

>mRNA_L-elsbetiae_contig15129.3669.1 ID=mRNA_L-elsbetiae_contig15129.3669.1|Name=mRNA_L-elsbetiae_contig15129.3669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1398bp|location=Sequence derived from alignment at L-elsbetiae_contig15129:1971..4290- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGACAGAGGAAGTATCAGTTGATTTGTATCATTTCGATTCAGTTGCT
CTACCATTCGTGGGGGAGAGCAACACGGCAACCTTGCGTAGTAAAAAAGT
CAAATCTGCAGAATATTAAGGTGTCTCCCTCGACCGCCTTGCAGCTGCCG
GTATCTTTAGTGGCTTTGACGCCTTGCTTCCGGGCCGAGGCAGGATCAGC
GGGGCGGGATACACGCGGACTACTTCGCCAGCACCAATTTTTGAAGATGA
GACAGAGGAAGTATCAGTTGATTTGTATCATTTCGATTCAGTTGCTCTAC
CATTCGTGGGGGAGAGCAACACGGCAACCTTGCGTAGTAAAAAAGTCAAA
TCTGCAGAATATTAAGGTGTCTCCCTCGACCGCCTTGCAGCTGCCGGTAT
CTTTAGTGGCTTTGACGCCTTGCTTCCGGGCCGAGGCAGGATCAGCGGGG
CGGGATACACGCGGACTACTTCGCCAGCACCAATTTTTGAAGGTGGAACT
CGTGAAGGTCACAACCCCGGAAGATAGCCACAACGAGCACGAGGCACTGA
CACAGCACGCAGAGGCAGTTTTGAAGGTGGAACTCGTGAAGGTCACAACC
CCGGAAGATAGCCACAACGAGCACGAGGCACTGACACAGCACGCAGAGGC
AGTTTTGAAGGCGCTCAAACTACCCTTTCGAAGAGTTTCTCTATGCAGCG
GCGACATTGGATTCGGTGCTCGCCTTTGCTACGACCTGGAAGTGTGGATG
CCCGGCCAAGCGGCCTACCGGGAAATATCATCGTGCAGCAATTGCCAAGA
CTTCCAGGCGCGTCGCATGGCTTTACGCTATCGAGAGCCGATGCCAGAAG
GCGCTCAAACTACCCTTTCGAAGAGTTTCTCTATGCAGCGGCGACATTGG
ATTCGGTGCTCGCCTTTGCTACGACCTGGAAGTGTGGATGCCCGGCCAAG
CGGCCTACCGGGAAATATCATCGTGCAGCAATTGCCAAGACTTCCAGGCG
CGTCGCATGGCTTTACGCTATCGAGAGCCGATGCCAGAAGCAAAGAAAAA
GAAGTCGCGGAACGTGTTGTGCCACACCATCAACGGATCAGGAGTCGCGG
TCGGTCGTGCGCTAGTGGCCGTGCTGGAGAACTACTACAACCCAGCGGAT
GGGTCGGTTGAGATTCCAGATGTTCTTCGCGCTTACATGGGAGGCGTTGA
AAAGCTCGATGCTCTTTAACAAAGAAAAAGAAGTCGCGGAACGTGTTGTG
CCACACCATCAACGGATCAGGAGTCGCGGTCGGTCGTGCGCTAGTGGCCG
TGCTGGAGAACTACTACAACCCAGCGGATGGGTCGGTTGAGATTCCAGAT
GTTCTTCGCGCTTACATGGGAGGCGTTGAAAAGCTCGATGCTCTTTAA
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