prot_L-elsbetiae_contig15129.3669.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig15129.3669.1
Unique Name	prot_L-elsbetiae_contig15129.3669.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	233

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: D8LRT5_ECTSI (Serine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT5_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 4.430e-113
Identity = 169/185 (91.35%), Postives = 175/185 (94.59%), Query Frame = 0

Query:   48 QLPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLDAL 232
            QLP+SLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVK TTPEDS NEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQ A+REISSCSNCQDFQARRM LRYREP PEAKKKKSRN+ CHTINGSGVAVGRALVAVLENYYNP DGSV IPDVLR YMGG EKL+++
Sbjct:  323 QLPMSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQGAFREISSCSNCQDFQARRMNLRYREPTPEAKKKKSRNLPCHTINGSGVAVGRALVAVLENYYNPIDGSVSIPDVLRPYMGGAEKLESV 507

[Close]

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A7S2UWA1_9STRA (Serine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA1_9STRA)

HSP 1 Score: 271 bits (693), Expect = 1.480e-85
Identity = 132/182 (72.53%), Postives = 154/182 (84.62%), Query Frame = 0

Query:   49 LPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLD 230
            LP+SL  LTPCFRAEAGS G+DTRGLLRQHQF KVELVK+ TPE S + HE LT HAEA L+ALKLP+R+V LCSGDIGFGAR+CYDLEVW+PGQ  +REI+SCSNC DFQARRM LRYR  + E KKKK+  V CHT+NGSG+AVGR LVA+LENYYNP DGSV +P+VL+ YMGG +K++
Sbjct:  313 LPISLTGLTPCFRAEAGSYGQDTRGLLRQHQFHKVELVKICTPEQSFDAHEELTAHAEACLQALKLPYRKVRLCSGDIGFGARMCYDLEVWLPGQEMFREIASCSNCADFQARRMGLRYR--VVEGKKKKT--VFCHTMNGSGLAVGRTLVAILENYYNPEDGSVAVPEVLQPYMGGQKKIE 490

[Close]

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: R1CZV8_EMIHU (Serine--tRNA ligase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZV8_EMIHU)

HSP 1 Score: 264 bits (675), Expect = 3.990e-83
Identity = 135/204 (66.18%), Postives = 157/204 (76.96%), Query Frame = 0

Query:   28 PCVVKKSNLQNIKVSPSTALQLPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLDA 231
            P  V  +NL   ++    AL  P+S V  TPCFRAEAGSAGRDTRGL RQHQFLKVELVK+ TPE S  +H+AL +HAE  L+AL+LP+R+V LC+GDIGF ARLCYDLEVW+PGQ  YREISSCSNC  FQARRM LRYR P P+   KK +   CHT+NGSG+AVGRALVAVLENY N ADGSV +P+ LR YMGG+E + A
Sbjct:  271 PPQVPLTNLHAGEILDEAAL--PISYVGATPCFRAEAGSAGRDTRGLFRQHQFLKVELVKICTPEQSDAQHQALVEHAERCLRALQLPYRKVLLCAGDIGFSARLCYDLEVWLPGQGRYREISSCSNCGSFQARRMGLRYR-PAPDGSGKKRKPEFCHTLNGSGLAVGRALVAVLENYQN-ADGSVTVPEALRPYMGGLEVISA 470

[Close]

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A835YK02_9STRA (Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK02_9STRA)

HSP 1 Score: 266 bits (679), Expect = 5.550e-83
Identity = 132/188 (70.21%), Postives = 153/188 (81.38%), Query Frame = 0

Query:   49 LPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAK-------KKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKL 229
            LP++  ALTPCFRAEAGS GRDTRGLLRQHQFLKVELV+VT+   S +EHEALT HAE +L+ LKLP+R++ LCSGDIGF AR+CYDLEVW+PGQ A+REISSCSNC DFQARRM LRY+   P A+       K K   + CHTINGSGVAVGRALVAVLENY+NP DG+V +P+VLR YMGG+ KL
Sbjct:  346 LPLAFAALTPCFRAEAGSYGRDTRGLLRQHQFLKVELVRVTSAASSADEHEALTGHAEKILQLLKLPYRKMRLCSGDIGFSARMCYDLEVWLPGQKAFREISSCSNCGDFQARRMGLRYKGKDPYAEEGKGGKGKGKQTTLACHTINGSGVAVGRALVAVLENYFNPKDGTVTVPEVLRPYMGGLLKL 533

[Close]

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A7S2DLF3_9EUKA (Serine--tRNA ligase n=2 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DLF3_9EUKA)

HSP 1 Score: 256 bits (654), Expect = 7.480e-83
Identity = 125/182 (68.68%), Postives = 145/182 (79.67%), Query Frame = 0

Query:   48 QLPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKL 229
            QLP+S  A TPCFRAEAGS GRDTRGL RQHQF KVELVK+ TPE +  +H  L QHAEA LKAL+LP+R++ LCSGDIGF +RLCYDLEVW+PGQ  +REISSCSNC DFQARRM+LRYR    + K K  + V CHT+NGSG+AVGR LVA+LENY N  DGS+ IP+VLR YMGG E +
Sbjct:   67 QLPLSYTAFTPCFRAEAGSHGRDTRGLFRQHQFHKVELVKICTPEQADEQHHQLVQHAEACLKALELPYRKMRLCSGDIGFSSRLCYDLEVWLPGQGRFREISSCSNCADFQARRMSLRYRPSERDEKGKAKKPVFCHTMNGSGLAVGRTLVAILENYQNE-DGSLTIPEVLRPYMGGKETI 247

[Close]

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A7S3Y0F1_HETAK (Serine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0F1_HETAK)

HSP 1 Score: 259 bits (661), Expect = 1.000e-80
Identity = 127/183 (69.40%), Postives = 147/183 (80.33%), Query Frame = 0

Query:   49 LPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLDA 231
            LP++  A TPCFRAEAGS GRDTRGLLRQHQF KVELVK+ T E +  EHE LT+ AE  L+ L LP+R++ LCSGDIGFGARLCYDLEVW+PGQ A+RE++SCSNC DFQ RRM LRYR      KKK   N   HT+NGSG+AVGRALVAVLENYYNP DGS+ IP+VLR YMGG+EK++A
Sbjct:  316 LPLAFAACTPCFRAEAGSYGRDTRGLLRQHQFNKVELVKICTEEQAKAEHEKLTEDAEKALQLLGLPYRKMRLCSGDIGFGARLCYDLEVWLPGQEAFREVASCSNCADFQGRRMNLRYRTVDENGKKK---NAFAHTMNGSGLAVGRALVAVLENYYNPEDGSLTIPEVLRPYMGGLEKIEA 495

[Close]

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A1E7FP98_9STRA (Serine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FP98_9STRA)

HSP 1 Score: 253 bits (646), Expect = 1.250e-79
Identity = 131/181 (72.38%), Postives = 146/181 (80.66%), Query Frame = 0

Query:   49 LPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKL 229
            LP+S VA TPCFRAEAGS+GRDT+GL+R HQF KVELVK+TT + S  EHE LT HAEA L+ L+LP+R+V LCSGDIGF AR CYDLEVW+PG A YREISSCSN  DFQARRMALR+R P P AK K     LCHTINGSG+AVGR LVA+LENY  P DGSV +PDVLR YMGGVE L
Sbjct:  223 LPISYVACTPCFRAEAGSSGRDTKGLIRTHQFQKVELVKITTADKSEEEHELLTSHAEACLQKLELPYRKVRLCSGDIGFSARHCYDLEVWLPGAAEYREISSCSNTGDFQARRMALRFR-PEPPAKPKPE---LCHTINGSGLAVGRTLVAILENYQLP-DGSVVVPDVLRPYMGGVEIL 398

[Close]

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A8J5X803_DIALT (Serine--tRNA ligase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X803_DIALT)

HSP 1 Score: 256 bits (654), Expect = 1.490e-79
Identity = 135/209 (64.59%), Postives = 162/209 (77.51%), Query Frame = 0

Query:   31 VKKSNLQNIKVSPSTALQLPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYRE----PMPEAKKKKSRNV-----LCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLD 230
            V  +NL   ++ P  +L  P++ VALTPCFRAEAGS GRDTRGL+RQHQF KVELV++T   DS  +HEALT+HAEA L+AL+LP+RR+ LCSGDIGF AR CYDLEVW+PGQ A+REISSCSNC DFQARRMALRYR     P  + +KK  +       LCHTINGSG+AVGRALVAVLENY  P DGSV +P+VLR YMGG+ +++
Sbjct:  299 VPLTNLLAGEILPEASL--PLAFVALTPCFRAEAGSYGRDTRGLIRQHQFAKVELVRITAAHDSDAQHEALTRHAEACLEALELPYRRMRLCSGDIGFSARHCYDLEVWLPGQGAWREISSCSNCGDFQARRMALRYRPAAAAPDGDGQKKGGKAAAPKPTLCHTINGSGLAVGRALVAVLENYAQP-DGSVIVPEVLRPYMGGLARIE 504

[Close]

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: A0A8J9X4W0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X4W0_PHATR)

HSP 1 Score: 253 bits (646), Expect = 4.090e-79
Identity = 128/183 (69.95%), Postives = 146/183 (79.78%), Query Frame = 0

Query:   49 LPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLDA 231
            LP+S VA TPCFRAEAGS GRDT+GL+R HQF KVELVK+TT + S  EHE LT HAEAVL++L+LP+R+V LCSGDIGF AR CYDLEVW+PG   +REISSCSN  DFQARRM+LRYR    +   KK + VLCHTINGSG+AVGR LVAVLENY  P DGSV +P+VLR YMGG E L A
Sbjct:  258 LPLSYVAWTPCFRAEAGSYGRDTKGLIRTHQFQKVELVKITTADTSDAEHETLTAHAEAVLRSLELPYRKVRLCSGDIGFSARHCYDLEVWLPGAGEFREISSCSNTGDFQARRMSLRYRPKPADGSNKKLKPVLCHTINGSGLAVGRTLVAVLENYQTP-DGSVVVPEVLRPYMGGKEILKA 439

[Close]

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Match: W7TYV7_9STRA (Serine--tRNA ligase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYV7_9STRA)

HSP 1 Score: 255 bits (652), Expect = 5.440e-79
Identity = 133/190 (70.00%), Postives = 149/190 (78.42%), Query Frame = 0

Query:   46 ALQLPVSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREISSCSNCQDFQARRMALRYREPMP-----EAKKKKSRNVLCHTINGSGVAVGRALVAVLENYYNPADGSVEIPDVLRAYMGGVEKLD 230
            A QLP+S V LTPCFRAEAGS GRDT+GLLRQHQF KVELVK+TTPE S  EHEALT+ AE  L+ L+LP+R+V LCSGDIGF A  CYDLEVW+P Q  YREI+SCSNC+DFQARRMALRYR P P     EA K K   VLCHTINGSG+AVGR LVA+LENY    DGSV +P+VL  YMGG  KL+
Sbjct:  340 ATQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSDAEHEALTRDAEECLRLLELPYRKVRLCSGDIGFAAAHCYDLEVWLPAQQTYREIASCSNCRDFQARRMALRYR-PAPLGAAKEAGKGKKSTVLCHTINGSGLAVGRTLVAILENYQEE-DGSVRLPEVLVPYMGGTTKLE 527

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig15129.3669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRT5_ECTSI	4.430e-113	91.35	Serine--tRNA ligase n=1 Tax=Ectocarpus siliculosus...	[more]
A0A7S2UWA1_9STRA	1.480e-85	72.53	Serine--tRNA ligase n=1 Tax=Fibrocapsa japonica Ta...	[more]
R1CZV8_EMIHU	3.990e-83	66.18	Serine--tRNA ligase n=2 Tax=Emiliania huxleyi TaxI...	[more]
A0A835YK02_9STRA	5.550e-83	70.21	Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=...	[more]
A0A7S2DLF3_9EUKA	7.480e-83	68.68	Serine--tRNA ligase n=2 Tax=Haptolina brevifila Ta...	[more]
A0A7S3Y0F1_HETAK	1.000e-80	69.40	Serine--tRNA ligase n=1 Tax=Heterosigma akashiwo T...	[more]
A0A1E7FP98_9STRA	1.250e-79	72.38	Serine--tRNA ligase n=1 Tax=Fragilariopsis cylindr...	[more]
A0A8J5X803_DIALT	1.490e-79	64.59	Serine--tRNA ligase n=1 Tax=Diacronema lutheri Tax...	[more]
A0A8J9X4W0_PHATR	4.090e-79	69.95	Hypothetical protein n=2 Tax=Phaeodactylum tricorn...	[more]
W7TYV7_9STRA	5.440e-79	70.00	Serine--tRNA ligase n=3 Tax=Monodopsidaceae TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002317	Serine-tRNA ligase, type1	PRINTS	PR00981	TRNASYNTHSER	coord: 115..128 score: 50.26 coord: 150..166 score: 64.71 coord: 75..88 score: 55.29 coord: 132..148 score: 55.12 coord: 63..75 score: 66.67
IPR002317	Serine-tRNA ligase, type1	PANTHER	PTHR43697	FAMILY NOT NAMED	coord: 47..229
IPR002314	Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)	PFAM	PF00587	tRNA-synt_2b	coord: 48..205 e-value: 3.8E-23 score: 82.4
None	No IPR available	GENE3D	3.30.930.10		coord: 20..231 e-value: 7.2E-69 score: 234.4
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..232
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.484
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 48..226
IPR006195	Aminoacyl-tRNA synthetase, class II	PROSITE	PS50862	AA_TRNA_LIGASE_II	coord: 49..216 score: 14.828

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig15129	contig	L-elsbetiae_contig15129:2367..4184 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig15129.3669.1	mRNA_L-elsbetiae_contig15129.3669.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig15129 1971..4290 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig15129.3669.1 ID=prot_L-elsbetiae_contig15129.3669.1|Name=mRNA_L-elsbetiae_contig15129.3669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=233bp
MRQRKYQLICIISIQLLYHSWGRATRQPCVVKKSNLQNIKVSPSTALQLP
VSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKVTTPEDSHNEHEA
LTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQAAYREIS
SCSNCQDFQARRMALRYREPMPEAKKKKSRNVLCHTINGSGVAVGRALVA
VLENYYNPADGSVEIPDVLRAYMGGVEKLDAL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002317	Ser-tRNA-ligase_type_1
IPR002314	aa-tRNA-synt_IIb
IPR006195	aa-tRNA-synth_II