mRNA_L-elsbetiae_contig10326.366.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10326.366.1
Unique NamemRNA_L-elsbetiae_contig10326.366.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Match: A0A6H5KGH9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH9_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.210e-29
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 1 
Query:    1 IHPQVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQVCM 192
            +  +VG DTEAFFDEDFWES+DCVVNALDNVEARLYVD+KCVDFARPLLESGTLGTKGNTQV +
Sbjct:  410 LEKKVGADTEAFFDEDFWESVDCVVNALDNVEARLYVDTKCVDFARPLLESGTLGTKGNTQVVL 473
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BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Match: A0A7S0ZS45_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZS45_NOCSC)

HSP 1 Score: 99.4 bits (246), Expect = 9.100e-23
Identity = 46/64 (71.88%), Postives = 54/64 (84.38%), Query Frame = 1 
Query:    1 IHPQVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQVCM 192
            +  +VG DTE  FD+ FWESLDCVVNALDN++ARLYVDS+CV FA+PLLESGTLGTK N QV +
Sbjct:  532 LEVRVGTDTEDTFDDSFWESLDCVVNALDNIQARLYVDSRCVWFAKPLLESGTLGTKANVQVVL 595
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BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Match: A0A812P9Q5_9DINO (UBA1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812P9Q5_9DINO)

HSP 1 Score: 96.7 bits (239), Expect = 7.680e-22
Identity = 43/61 (70.49%), Postives = 54/61 (88.52%), Query Frame = 1 
Query:   10 QVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQVCM 192
            +VG DTE  FD++FW+SLDCVVNALDN++AR+YVDS+CV F++PLLESGTLGTK N QV +
Sbjct:   64 RVGPDTEDTFDDEFWDSLDCVVNALDNIQARMYVDSRCVWFSKPLLESGTLGTKANVQVVL 124
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BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Match: W7HYV6_9PEZI (E1 ubiquitin-activating enzyme n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7HYV6_9PEZI)

HSP 1 Score: 96.7 bits (239), Expect = 8.040e-22
Identity = 45/64 (70.31%), Postives = 53/64 (82.81%), Query Frame = 1 
Query:    1 IHPQVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQVCM 192
            +  +VG DTE  F+EDFWE+LD V NALDNVEAR+YVD +CV F +PLLESGTLGTKGNTQV +
Sbjct:  514 LRDRVGEDTEDIFNEDFWEALDGVTNALDNVEARVYVDRRCVFFRKPLLESGTLGTKGNTQVVL 577
[Close]
BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Match: A0A812WA09_9DINO (UBA1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812WA09_9DINO)

HSP 1 Score: 95.5 bits (236), Expect = 8.930e-22
Identity = 43/61 (70.49%), Postives = 53/61 (86.89%), Query Frame = 1 
Query:   10 QVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQVCM 192
            +VG DTE  FD+ FW+SLDCVVNALDN++AR+YVDS+CV F++PLLESGTLGTK N QV +
Sbjct:   13 RVGPDTEETFDDAFWDSLDCVVNALDNIQARMYVDSRCVWFSKPLLESGTLGTKANVQVVL 73
[Close]
BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Match: A0A3A2Z1E9_9EURO (Ubiquitin-activating enzyme E1 n=1 Tax=Aspergillus sclerotialis TaxID=2070753 RepID=A0A3A2Z1E9_9EURO)

HSP 1 Score: 89.4 bits (220), Expect = 9.950e-22
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 
Query:    1 IHPQVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQVCM 192
            +  +VG DTE  F+E FWESLD V NALDNV+AR YVD +CV F + LLESGTLGTKGNTQV +
Sbjct:   12 LRDRVGPDTEHIFNEKFWESLDGVTNALDNVDARTYVDRRCVFFRKTLLESGTLGTKGNTQVVL 75
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BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Match: A0A1L9TZX2_9EURO (UBA_e1_C domain-containing protein n=2 Tax=Aspergillus subgen. Nidulantes TaxID=2720870 RepID=A0A1L9TZX2_9EURO)

HSP 1 Score: 96.3 bits (238), Expect = 1.100e-21
Identity = 46/66 (69.70%), Postives = 52/66 (78.79%), Query Frame = 1 
Query:    1 IHPQVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQVCMYR 198
            +  +VG DTE  F+EDFWE LD V NALDNVEAR YVD +CV F +PLLESGTLGTKGNTQV + R
Sbjct:  521 LKDRVGQDTEHIFNEDFWEGLDGVTNALDNVEARTYVDRRCVFFRKPLLESGTLGTKGNTQVVLPR 586
[Close]
BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Match: A0A7R7XFJ7_9EURO (E1 ubiquitin-activating protein n=1 Tax=Aspergillus puulaauensis TaxID=1220207 RepID=A0A7R7XFJ7_9EURO)

HSP 1 Score: 95.9 bits (237), Expect = 1.500e-21
Identity = 46/66 (69.70%), Postives = 52/66 (78.79%), Query Frame = 1 
Query:    1 IHPQVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQVCMYR 198
            +  +VG DTE  F+EDFWE LD V NALDNVEAR YVD +CV F +PLLESGTLGTKGNTQV + R
Sbjct:  521 LKDRVGQDTEHVFNEDFWEGLDGVTNALDNVEARTYVDRRCVFFRKPLLESGTLGTKGNTQVVLPR 586
[Close]
BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Match: A0A3D8RXM8_9EURO (UBA_e1_C domain-containing protein n=1 Tax=Aspergillus mulundensis TaxID=1810919 RepID=A0A3D8RXM8_9EURO)

HSP 1 Score: 95.9 bits (237), Expect = 1.500e-21
Identity = 46/66 (69.70%), Postives = 52/66 (78.79%), Query Frame = 1 
Query:    1 IHPQVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQVCMYR 198
            +  +VG DTE  F+EDFWE LD V NALDNVEAR YVD +CV F +PLLESGTLGTKGNTQV + R
Sbjct:  624 LKDRVGPDTEEIFNEDFWEGLDGVTNALDNVEARTYVDRRCVFFRKPLLESGTLGTKGNTQVVLPR 689
[Close]
BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Match: A0A1Y1MBW9_PHOPY (UBA_e1_C domain-containing protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MBW9_PHOPY)

HSP 1 Score: 95.5 bits (236), Expect = 2.050e-21
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 1 
Query:   10 QVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQVCM 192
            +VG DTE+ FDE FWESLD V NALDNVEAR YVD +CV F +PLLESGTLGTKGNTQV +
Sbjct:  527 RVGPDTESIFDEAFWESLDGVTNALDNVEARTYVDRRCVFFRKPLLESGTLGTKGNTQVVL 587
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10326.366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGH9_9PHAE1.210e-2985.94Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S0ZS45_NOCSC9.100e-2371.88Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A812P9Q5_9DINO7.680e-2270.49UBA1 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
W7HYV6_9PEZI8.040e-2270.31E1 ubiquitin-activating enzyme n=1 Tax=Drechslerel... [more]
A0A812WA09_9DINO8.930e-2270.49UBA1 protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A3A2Z1E9_9EURO9.950e-2267.19Ubiquitin-activating enzyme E1 n=1 Tax=Aspergillus... [more]
A0A1L9TZX2_9EURO1.100e-2169.70UBA_e1_C domain-containing protein n=2 Tax=Aspergi... [more]
A0A7R7XFJ7_9EURO1.500e-2169.70E1 ubiquitin-activating protein n=1 Tax=Aspergillu... [more]
A0A3D8RXM8_9EURO1.500e-2169.70UBA_e1_C domain-containing protein n=1 Tax=Aspergi... [more]
A0A1Y1MBW9_PHOPY2.050e-2175.41UBA_e1_C domain-containing protein n=1 Tax=Photinu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10326contigL-elsbetiae_contig10326:174..371 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score97.8
Seed ortholog evalue2e-18
Seed eggNOG ortholog39416.CAZ79796
Preferred nameUBA1
KEGG koko:K03178
KEGG Pathwayko04120,ko05012,map04120,map05012
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004839,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0008641,GO:0009056,GO:0009057,GO:0009987,GO:0016567,GO:0016874,GO:0016877,GO:0017076,GO:0019538,GO:0019941,GO:0030163,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0046872,GO:0050896,GO:0051603,GO:0051716,GO:0070647,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.Belongs to the ubiquitin-activating E1 family
EggNOG OGs38C42@33154,3NURC@4751,3QPCX@4890,COG0476@1,KOG2012@2759
EC6.2.1.45
COG Functional cat.O
Best tax levelAscomycota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121,ko04147
Exons1
Model size198
Cds size198
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815260.9408092-CDS-L-elsbetiae_contig10326:173..3711622815260.9408092-CDS-L-elsbetiae_contig10326:173..371Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10326 174..371 -
1691682802.782165-CDS-L-elsbetiae_contig10326:173..3711691682802.782165-CDS-L-elsbetiae_contig10326:173..371Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10326 174..371 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10326.366.1prot_L-elsbetiae_contig10326.366.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10326 174..371 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10326.366.1

>prot_L-elsbetiae_contig10326.366.1 ID=prot_L-elsbetiae_contig10326.366.1|Name=mRNA_L-elsbetiae_contig10326.366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=66bp
IHPQVGHDTEAFFDEDFWESLDCVVNALDNVEARLYVDSKCVDFARPLLE
SGTLGTKGNTQVCMYR
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mRNA from alignment at L-elsbetiae_contig10326:174..371-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10326.366.1 ID=mRNA_L-elsbetiae_contig10326.366.1|Name=mRNA_L-elsbetiae_contig10326.366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=198bp|location=Sequence derived from alignment at L-elsbetiae_contig10326:174..371- (Laminarionema elsbetiae ELsaHSoW15)
ATCCACCCCCAGGTGGGGCACGATACAGAGGCGTTCTTCGACGAGGACTT
CTGGGAGTCTCTGGACTGCGTCGTGAACGCCCTGGATAACGTGGAGGCTC
GCCTGTACGTGGACTCCAAGTGCGTGGACTTCGCGAGGCCGCTGCTGGAG
TCCGGCACTCTCGGGACCAAGGGGAACACGCAGGTATGTATGTACCGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10326:174..371-

>mRNA_L-elsbetiae_contig10326.366.1 ID=mRNA_L-elsbetiae_contig10326.366.1|Name=mRNA_L-elsbetiae_contig10326.366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=396bp|location=Sequence derived from alignment at L-elsbetiae_contig10326:174..371- (Laminarionema elsbetiae ELsaHSoW15)
ATCCACCCCCAGGTGGGGCACGATACAGAGGCGTTCTTCGACGAGGACTT
CTGGGAGTCTCTGGACTGCGTCGTGAACGCCCTGGATAACGTGGAGGCTC
GCCTGTACGTGGACTCCAAGTGCGTGGACTTCGCGAGGCCGCTGCTGGAG
TCCGGCACTCTCGGGACCAAGGGGAACACGCAGGTATGTATGTACCGTAT
CCACCCCCAGGTGGGGCACGATACAGAGGCGTTCTTCGACGAGGACTTCT
GGGAGTCTCTGGACTGCGTCGTGAACGCCCTGGATAACGTGGAGGCTCGC
CTGTACGTGGACTCCAAGTGCGTGGACTTCGCGAGGCCGCTGCTGGAGTC
CGGCACTCTCGGGACCAAGGGGAACACGCAGGTATGTATGTACCGT
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