mRNA_L-elsbetiae_contig1511.3660.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Match: A0A6H5K366_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K366_9PHAE) HSP 1 Score: 131 bits (330), Expect = 3.100e-30 Identity = 66/109 (60.55%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 514 SSWSCVDRAAALRQQQQRLLLLRHASRCSLTERGECQTSPHCLAVKGLWRHIAGCMDSSCRVXXXXXXXXXXXXXXXXXXXXXHLCGPVRAVLARERDEQRLKGQADSS 840 SSWS +DRAAALRQQQ+RLLLLRHASRC E G+C TSPHCL VK LWRHI CMD+SC V HLCGPVRA+++RERDEQRL G+ SS Sbjct: 248 SSWSRLDRAAALRQQQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIVQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQRLLGRTGSS 356
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Match: A0A835YP23_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP23_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.120e-9 Identity = 61/94 (64.89%), Postives = 69/94 (73.40%), Query Frame = 1 Query: 535 RAAALRQQQQRLLLLRHASRCSLTERGECQTSPHCLAVKGLWRHIAGCMDSSCRVXXXXXXXXXXXXXXXXXXXXXHLCGPVRAVLARERDEQR 816 RA LRQQQQRLLLLRHAS+C L C +PHC A+K LWRHIA C D C +XXXXXXXXXXXXXXXXXXXXX +CGPVR + D+ + Sbjct: 867 RAQVLRQQQQRLLLLRHASKCVLE--APCAVTPHCAAMKKLWRHIAECKDQKCPMXXXXXXXXXXXXXXXXXXXXXXVCGPVRDAIQENVDKAK 958
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Match: A0A7S3UR13_HETAK (Histone acetyltransferase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UR13_HETAK) HSP 1 Score: 67.0 bits (162), Expect = 1.280e-9 Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 1 Query: 523 SCVDRAAALRQQQQRLLLLRHASRCSLTERGECQTSPHCLAVKGLWRHIAGCMDSSCRVXXXXXXXXXXXXXXXXXXXXXHLCGPVRAVLARERDEQR 816 + +R LRQQQQRLLLLRHASRC CQ + C +K LW+HI+ C D C XXXXXXXXXXXXXXX +C PVR + R ++ ++ Sbjct: 1 TAEERKQVLRQQQQRLLLLRHASRCPTEPPARCQYTESCARMKALWQHISNCKDQQCATGHCVSSXXXXXXXXXXXXXXXPVCSPVRDAIKRNQERKK 98
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Match: A0A7S1UG10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG10_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.730e-9 Identity = 60/92 (65.22%), Postives = 71/92 (77.17%), Query Frame = 1 Query: 541 AALRQQQQRLLLLRHASRCSL-TERGE-CQTSPHCLAVKGLWRHIAGCMDSSCRVXXXXXXXXXXXXXXXXXXXXXHLCGPVRAVLARERDE 810 A LRQQQQRLLLLRHAS+C +E G+ C +PHC ++K LW+HIA C D C+VXXXXXXXXXXXXXXXXXXXXX +C PVR + R R + Sbjct: 392 ALLRQQQQRLLLLRHASKCPFDSESGQQCTVTPHCASMKKLWKHIAECKDQRCQVXXXXXXXXXXXXXXXXXXXXXSVCAPVREAIQRSRQK 483
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Match: A0A482S2J4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2J4_9ARCH) HSP 1 Score: 71.2 bits (173), Expect = 2.700e-9 Identity = 57/94 (60.64%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 535 RAAALRQQQQRLLLLRHASRCSLTERGECQTSPHCLAVKGLWRHIAGCMDSSCRVXXXXXXXXXXXXXXXXXXXXXHLCGPVRAVLARERDEQR 816 R L+QQQQRLLLLRHAS+C E G+C +PHC +K LW+HI C D C+V XXXXXXXXXXXXXXXXXXXX +C PVR + R + R Sbjct: 655 RKQVLKQQQQRLLLLRHASKCP-HENGQCPVTPHCWNMKQLWKHIMSCKDQDCKVAXXXXXXXXXXXXXXXXXXXXXVCAPVREAIKRNYERSR 747
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Match: A0A7S4S4V4_9STRA (Histone acetyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S4V4_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 4.140e-9 Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 550 RQQQQRLLLLRHASRCSLTERGECQTSPHCLAVKGLWRHIAGCMDSSCRVXXXXXXXXXXXXXXXXXXXXXHLCGPVRAVLAR-ERDEQRLKGQADSS 840 R +QQRLLLLRHAS+C E G+C +PHC +K LW+HIA C D +C V XXXXXXXXXXXXXXXXXXX CGPVR + + ++ +Q++ G + SS Sbjct: 106 RHKQQRLLLLRHASKCEY-ENGKCPITPHCQEMKTLWKHIASCKDQNCNVRXXXXXXXXXXXXXXXXXXXCAACGPVRETIRKGQQRQQQMAGSSVSS 202
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Match: A0A7S4S3L3_9STRA (Histone acetyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S3L3_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 5.140e-9 Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 550 RQQQQRLLLLRHASRCSLTERGECQTSPHCLAVKGLWRHIAGCMDSSCRVXXXXXXXXXXXXXXXXXXXXXHLCGPVRAVLAR-ERDEQRLKGQADSS 840 R +QQRLLLLRHAS+C E G+C +PHC +K LW+HIA C D +C V XXXXXXXXXXXXXXXXXXX CGPVR + + ++ +Q++ G + SS Sbjct: 106 RHKQQRLLLLRHASKCEY-ENGKCPITPHCQEMKTLWKHIASCKDQNCNVRXXXXXXXXXXXXXXXXXXXCAACGPVRETIRKGQQRQQQMAGSSVSS 202
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Match: A0A7S1Z8B2_9STRA (Histone acetyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z8B2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 5.400e-9 Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 550 RQQQQRLLLLRHASRCSLTERGECQTSPHCLAVKGLWRHIAGCMDSSCRVXXXXXXXXXXXXXXXXXXXXXHLCGPVRAVLAR-ERDEQRLKGQADSS 840 R +QQRLLLLRHAS+C E G+C +PHC +K LW+HIA C D +C V XXXXXXXXXXXXXXXXXXX CGPVR + + ++ +Q++ G + SS Sbjct: 468 RHKQQRLLLLRHASKCEY-ENGKCPITPHCQEMKTLWKHIASCKDQNCNVRXXXXXXXXXXXXXXXXXXXCAACGPVRETIRKGQQRQQQMAGSSVSS 564
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Match: B8LBX3_THAPS (Histone acetyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBX3_THAPS) HSP 1 Score: 70.1 bits (170), Expect = 7.130e-9 Identity = 53/80 (66.25%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 550 RQQQQRLLLLRHASRCSLTERGECQTSPHCLAVKGLWRHIAGCMDSSCRVXXXXXXXXXXXXXXXXXXXXXHLCGPVRAV 789 R +QQRLLLLRHAS+C+ E G C T+PHC +K LW+HIA C D C+V XXXXXXXXXXXXXXXXXX +CGPVR + Sbjct: 637 RHKQQRLLLLRHASKCN-AEPGRCTTTPHCAEMKVLWKHIANCKDQYCKVKXXXXXXXXXXXXXXXXXXGCEICGPVREI 715
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Match: A0A7S2SNM3_9STRA (Histone acetyltransferase n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SNM3_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.250e-8 Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 535 RAAALRQQQQRLLLLRHASRCSLTERGECQTSPHCLAVKGLWRHIAGCMDSSCRVXXXXXXXXXXXXXXXXXXXXXHLCGPVRAVLARERDEQ 813 R L+Q+QQRLLLLRHASRC TE G C+ + HC +K LW+HIA C D C V XXXXXXXXXXXXXXXXXXXX +C PVR + +R +Q Sbjct: 226 RQQVLKQRQQRLLLLRHASRCPSTE-GTCKITAHCAPMKKLWKHIAKCKDERCSVPXXXXXXXXXXXXXXXXXXXXPVCKPVRIISQNQRHQQ 317 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1511.3660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1511.3660.1 >prot_L-elsbetiae_contig1511.3660.1 ID=prot_L-elsbetiae_contig1511.3660.1|Name=mRNA_L-elsbetiae_contig1511.3660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp MEAWRDMGAALAEGQCGGGGGGGGGSSTAAAPAGVFVFGAAAPTPPSVGPback to top mRNA from alignment at L-elsbetiae_contig1511:10646..14530- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1511.3660.1 ID=mRNA_L-elsbetiae_contig1511.3660.1|Name=mRNA_L-elsbetiae_contig1511.3660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3885bp|location=Sequence derived from alignment at L-elsbetiae_contig1511:10646..14530- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1511:10646..14530- >mRNA_L-elsbetiae_contig1511.3660.1 ID=mRNA_L-elsbetiae_contig1511.3660.1|Name=mRNA_L-elsbetiae_contig1511.3660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1830bp|location=Sequence derived from alignment at L-elsbetiae_contig1511:10646..14530- (Laminarionema elsbetiae ELsaHSoW15)back to top |