mRNA_L-elsbetiae_contig1509.3646.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Match: D7G4Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI) HSP 1 Score: 548 bits (1412), Expect = 8.470e-179 Identity = 256/306 (83.66%), Postives = 281/306 (91.83%), Query Frame = 3 Query: 3 SPPPKQLGESEAGSSKMVSTRQGPKSAVGRNHFETVFAEAMEGGNMEGHLMKQKRFTARWQTYYFKLEDGFLTHYEKKSLVGTRKNKTLELTSRSTTAFTNTKCCFCVRTGQSAWFVIAQTHEDMTRWMTAINAQIYSLFLKNFTPPADDYWGRGTEGRFFYGMPETGASQWIYTHPEDGAPRTGEGIFPMEVVEVVQLLPMGEDMLWLRLADARGWTCGRNTKDGEPCLEQVAGEIVEDNSVYELPRNLEQMTHILCGPAMASEVTGEILAPGDRVQAVERFTPAGTKSGIVFIKMADGRGWCPI 920 SPPPKQ E++A SSKMVSTR GPKSA GRNHFETVF EAMEGG MEGHLMKQKRFTARWQTYYFKL+DGFLTHY+KKSLVGTRK KTLEL STTAFTNTKCCFCVRTGQ+AWF+IAQ H+ MT+WMTAINAQ+YSLFLKNFTPPAD+YWG+GT+GRFFYGMPE GASQWIYTHPE+GAPRTGEG+FPMEVVEVVQLLP+GED LWLRLAD RGWTCGR++KDGEPCLEQVAG+IVED VYELPRN EQ TH+LCGPA ASEVTGE+L PGDRVQAVE+FTPAG SG+VFIK+A+GRGW P+ Sbjct: 1159 SPPPKQSSENDATSSKMVSTRLGPKSAAGRNHFETVFQEAMEGGMMEGHLMKQKRFTARWQTYYFKLDDGFLTHYDKKSLVGTRKRKTLELKPHSTTAFTNTKCCFCVRTGQNAWFLIAQDHDQMTQWMTAINAQVYSLFLKNFTPPADNYWGQGTKGRFFYGMPENGASQWIYTHPEEGAPRTGEGVFPMEVVEVVQLLPVGEDHLWLRLADERGWTCGRHSKDGEPCLEQVAGDIVEDTRVYELPRNQEQGTHVLCGPATASEVTGEVLDPGDRVQAVEKFTPAGADSGVVFIKLAEGRGWVPL 1464
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Match: D7FPQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ0_ECTSI) HSP 1 Score: 313 bits (803), Expect = 9.350e-92 Identity = 146/283 (51.59%), Postives = 199/283 (70.32%), Query Frame = 3 Query: 87 GRNHFETVFAEAMEGGNMEGHLMKQKRFTARWQTYYFKLEDGFLTHYEKKSLVGTRKNKTLELTSRSTTAFTNTKCCFCVRTGQSAWFVIAQTHEDMTRWMTAINAQIYSLFLKNFTPPADDYWGRGTEGRFFYGMPETGASQWIYTHPEDGAPRTGEGIFPMEVVEVVQLLPMGEDMLWLRLADARGWTCGRNTKDGEPCLEQVAGEIVEDNSVYELPRNLEQMTHILCGPAMASEVTGEILAPGDRVQAVERFTPAGTKSGIVFIKMADGRGWCPIRTGGG 935 G F+ +F EAM+GG +EGHLMKQ ++ +RW+ YF+LEDG+LT+Y+KKSLVGT KNK +ELT+ S T++TNTK CFCVRTG++ WF++ + + +WMTAINAQI+ LF+K + P D+YW +GT GRFFY M + QWI T+PE APRTG+G+FP EV+EV Q L ++ +LR+ + RGWT +N DG E++ GE+V D Y P + + +L GP + S+ TGE L PG+R +A+ERFTP G SG+VFIK+ DGRGW P+R G Sbjct: 1134 GARAFKEMFEEAMKGGCVEGHLMKQSKYFSRWKPRYFRLEDGYLTYYDKKSLVGTNKNKGMELTAHSITSYTNTKNCFCVRTGEAVWFLLGKDELALNKWMTAINAQIHGLFIKLYNVPEDNYWSQGTNGRFFYRMVDDALPQWIRTYPEQAAPRTGDGLFPGEVIEVAQTLT-NKETEFLRIGNDRGWTYAKNPADGSTLFEEIDGEVVPDTRNYGFPPSAKDPIPLLFGPGLESQQTGEALIPGERAEAMERFTP-GDGSGVVFIKLKDGRGWVPVRKRNG 1414
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Match: D8LMS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS5_ECTSI) HSP 1 Score: 254 bits (650), Expect = 5.200e-71 Identity = 134/280 (47.86%), Postives = 179/280 (63.93%), Query Frame = 3 Query: 99 FETVFAEAMEGGNMEGHLMKQKRFTARWQTYYFKLEDGFLTHYEKKSLVGTRKNKTLELTSRSTTAFTNTKCCFCVRTGQSAWFVIAQTHEDMTRWMTAINAQIYSLFLKNFTPPADDYWGRGTEGRFFYGMPETGASQWIYTHPEDGAPRTGEGIFPMEVVEVVQLLPMGEDMLWLRLADARGWTCGRNTKDGEPCLEQVAGEIVEDNSVYELPRNLEQMTHILCGPAMASEVTGEILAPGDRVQAVERFTPAGTKSGIVFIKMADGRGWCPIRTGGGV 938 FE+ F EAMEGG EGHLMKQ T W++ YF+LED LT Y+ KSLVGTRKNK +EL ST ++TN CF VRTG+ W ++A+ + M +W+TAINA I+ LF+K P D+Y +G +G+FFY M QWI + PE+ APRTGEG+FP EVVE+VQ+L + ++LR+A+ RGWT N +DG E+ G+ ED Y +N IL GP+M S++TG+ LAPG +A RF PA + G+ FIK+A +GW P+ GV Sbjct: 1184 FESRFKEAMEGGVTEGHLMKQVLSTM-WKSRYFRLEDDILTFYDTKSLVGTRKNKRMELQPDSTASYTNVPNCFSVRTGEENWILLAKDEDSMEKWITAINAVIHGLFIKRHNVPEDNYDSQGLKGQFFYRMVPNVQPQWIRSFPEEEAPRTGEGLFPGEVVEIVQVLS-NNNKVYLRIANDRGWTVAANPEDGSVLFEESNGDFTEDPMDYCTSKN---EVPILFGPSMESQMTGDALAPGQIAEATGRFVPAD-EGGLAFIKLAGDKGWVPMNPSFGV 1457
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Match: D7FJU8_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU8_ECTSI) HSP 1 Score: 226 bits (575), Expect = 4.500e-61 Identity = 122/280 (43.57%), Postives = 165/280 (58.93%), Query Frame = 3 Query: 108 VFAEAMEGGNMEGHLMKQKRFTARWQTYYFKLEDGFLTHY--EKKSLVGTRKNKT--LELTSRSTTAFTNTKCCFCVRTGQSAWFVIAQTHEDMTRWMTAINAQIYSLFLKNFTPPADDYWGRGTEGRFFYGMPETGASQWIYTHPEDGAPRTGEGIFPMEVVEVVQLLPMGEDMLWLRLADARGWTCGRNTKDGEPCLEQVAGEIVEDNSVYELPRNLEQMTHILCGPAMASEVTGEILAPGDRVQAVERFTPAGTKSGIVFIKMADGRGWCPIRTGGG 935 V + M E K R W YYF+L++ LT + S G + ++LTS + T++TNTK CFCVRT +WF++A++ +DM RWMTAIN + +F + DDY G+G GRFFY M E QWI THP APRTG+G+FP EVVEV Q+L ED+ +LRLA+ RGWT R+ DG E +AG + ED Y P M IL GP + ++ TG ++ PG+RV+A ERFTP S +VF+K+ DGRGW P+++ G Sbjct: 1058 VELKVMNLNTSEDKREKPTRRAPTWNQYYFRLKEETLTKSPPRRSSFPGNANQQAEDMKLTSATITSYTNTKNCFCVRTDDVSWFLLARSLDDMKRWMTAINLRARHIFQREHGVH-DDYMGQGRRGRFFYRMVEGSVPQWILTHPMTKAPRTGDGLFPGEVVEVTQVLS-SEDVTFLRLANDRGWTFARSPADGSVLFEDLAGGVAEDTEEYTFPPGASGMVPILHGPGLRTQATGVMVRPGERVRASERFTPLDNSS-VVFVKLQDGRGWMPLKSQHG 1334
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Match: A0A6H5LIB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIB2_9PHAE) HSP 1 Score: 222 bits (565), Expect = 1.150e-59 Identity = 120/280 (42.86%), Postives = 168/280 (60.00%), Query Frame = 3 Query: 108 VFAEAMEGGNMEGHLMKQKRFTARWQTYYFKLEDGFLTHY--EKKSLVGT--RKNKTLELTSRSTTAFTNTKCCFCVRTGQSAWFVIAQTHEDMTRWMTAINAQIYSLFLKNFTPPADDYWGRGTEGRFFYGMPETGASQWIYTHPEDGAPRTGEGIFPMEVVEVVQLLPMGEDMLWLRLADARGWTCGRNTKDGEPCLEQVAGEIVEDNSVYELPRNLEQMTHILCGPAMASEVTGEILAPGDRVQAVERFTPAGTKSGIVFIKMADGRGWCPIRTGGG 935 V + M E K R +W Y+F+L + LT + S G ++++ ++LTS + T++TNTK CFCVRT + +WF++A++ +DM RWM+AIN + +F + DDY G+G GRFFY M E QWI THP APRTG+G+FP EVVEV Q+L ED+ +LRLA+ RGWT R+ DG E +AG + ED Y P M IL GP + ++ TG + PG+RV+A ERFTP S +VF+K+ DGRGW P+++ G Sbjct: 2313 VELKVMNLNTSEDKREKPTRRAPKWNQYFFRLREETLTKSLPRRPSSPGNADQQSEDMKLTSATITSYTNTKNCFCVRTDEVSWFLLARSLDDMKRWMSAINLRARHIFQREHGVH-DDYAGQGRRGRFFYRMVEGSVPQWILTHPMTKAPRTGDGLFPGEVVEVTQVLS-SEDVTFLRLANDRGWTFARSPADGSVLFEDLAGGVAEDTEEYTFPPGASGMVPILHGPGLKTQATGVFVRPGERVRASERFTPLDN-SKVVFVKLQDGRGWMPLKSEHG 2589
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Match: D8LMW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW4_ECTSI) HSP 1 Score: 220 bits (560), Expect = 4.500e-59 Identity = 117/281 (41.64%), Postives = 168/281 (59.79%), Query Frame = 3 Query: 111 FAEAMEGGNMEGHLMKQKRFTARWQTYYFKLEDGFLTHYEKKSLVGTRKNKTLELTSRSTTAFTNTKCCFCVRTGQSAWFVIAQTHEDMTRWMTAINAQIYSLFLKNFTPPADDYWGRGTEGRFFYGMPETGASQWIYTHPEDGAPRTGEGIFPMEVVEVVQLLPMGEDMLWLRLADARGWTCGRNTK--DGEPCLEQVAGEIVEDNSVYELPRNLEQMTHILCGPAMASEVTGEILAPGDRVQAVERFTPAG---TKSGIVFIKMADGRGWCPIRTGGGV 938 F EAME G EG+LM Q + RW YF L++GFL+HYEK SLVGT+K+KT+EL + S T TN F VRTG + W ++A++ ++M WM AI QI++LF++ + P DDY +GT G+ FY M QWI T P AP TG+G+F E++EV Q+L E + +LR+A+ RGW ++ + DG +V+GE+ + + +P Q +L GP++ S+ TG L PGD V+ V+R+T A + G F+K+ GW PI GV Sbjct: 1119 FEEAMEDGYKEGYLMSQSKMMKRWTPRYFVLDNGFLSHYEKISLVGTKKHKTMELKADSVTRPTNQINTFGVRTGTTEWLLLARSKKEMKAWMGAITDQIHALFIREYNVPGDDYQSQGTWGQCFYKMAAGVRPQWIRTFPVPQAPHTGDGLFEGEIIEVTQVLE-NEGVKFLRMANDRGWASAQDIEAGDGTALFTKVSGELTTETREHNVPMIANQPAVVLFGPSLESQETGATLMPGDSVRVVQRYTSAPGVEKRDGQAFVKLKKTGGWVPIMKSNGV 1398
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Match: D8LHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI) HSP 1 Score: 211 bits (537), Expect = 4.950e-56 Identity = 102/194 (52.58%), Postives = 136/194 (70.10%), Query Frame = 3 Query: 99 FETVFAEAMEGGNMEGHLMKQKRFTARWQTYYFKLEDGFLTHYEKKSLVGTRKNKTLELTSRSTTAFTNTKCCFCVRTGQSAWFVIAQTHEDMTRWMTAINAQIYSLFLKNFTPPADDYWGRGTEGRFFYGMPETGASQWIYTHPEDGAPRTGEGIFPMEVVEVVQLLPMGED-MLWLRLADARGWTCGRNTKD 677 FET F EA G MEG+LMKQ + ++RW++ +F+L+DGFLT Y+KKSLVGT NK +ELT ST +F TK CFCVRT +AWF++A+ M WMTAINA+I+ LF+K + P D+YW +G +GRFFY M QWI T+PE APRTG+G+F +V++VVQ+L E ++LR+AD RGW R+ D Sbjct: 1146 FETKFKEAAIAGRMEGYLMKQSKHSSRWKSQFFRLDDGFLTCYDKKSLVGTTPNKEMELTGHSTASFATTKNCFCVRTEDAAWFLMARDLGSMNEWMTAINAEIHRLFVKLYDVPEDNYWSQGLQGRFFYRMAAGARPQWILTYPEQAAPRTGDGLFEGDVIDVVQVLTHKETGKVFLRIADDRGWAQRRDPVD 1339
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Match: A0A6H5JKN0_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKN0_9PHAE) HSP 1 Score: 207 bits (526), Expect = 1.600e-55 Identity = 112/279 (40.14%), Postives = 161/279 (57.71%), Query Frame = 3 Query: 117 EAMEGGNMEGHLMKQKRFTARWQTYYFKLEDGFLTHYEKKSLVGTRKNKTLELTSRSTTAFTNTKCCFCVRTGQSAWFVIAQTHEDMTRWMTAINAQIYSLFLKNFTPPADDYWGRGTEGRFFYGMPETGASQWIYTHPEDGAPRTGEGIFPMEVVEVVQLLPMGEDMLWLRLADARGWTCGRNTK--DGEPCLEQVAGEIVEDNSVYELPRNLEQMTHILCGPAMASEVTGEILAPGDRVQAVERFTPAG---TKSGIVFIKMADGRGWCPIRTGGGV 938 EAM G EG+LM Q + RW YF L++GFL+HYE SLVGT+K+KT+EL + S T N F VRTG + W ++A++ +M WM AI QI++LF++ + P DDY +G G+ FY M QWI T P AP TG+G+F E +EV Q+L E + +LR+A+ RGW ++ + DG +V+GE+ + + +P Q +L GP++ S+ G L PGD V+ V+R+TPA + G F+K+ GW PI GV Sbjct: 497 EAMADGYKEGYLMSQSKMMKRWTPRYFVLDNGFLSHYENISLVGTKKHKTMELKADSVTRPANQINTFGVRTGTTEWLLLARSKNEMKAWMGAIKDQIHALFIREYNVPGDDYQSQGAWGQCFYKMVAGVRPQWIRTFPVPQAPHTGDGLFEGETIEVTQVLE-NEGVSFLRMANDRGWASAQDIEAGDGTALFTKVSGELTTETREHIVPMIANQPAVVLFGPSLESQEMGATLMPGDIVRVVQRYTPAPGVEKRDGQTFVKLKKTGGWVPIMKSNGV 774
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Match: A0A836C8E2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E2_9STRA) HSP 1 Score: 206 bits (523), Expect = 3.690e-54 Identity = 123/354 (34.75%), Postives = 177/354 (50.00%), Query Frame = 3 Query: 12 PKQLGESEAGSSKMVSTRQGPKSAVGRNHFETVFAEAMEGGNMEGHLMKQKRFTARWQTYYFKLEDGFLTHYEKKSLVGTRKNKTLELTSRSTTAFTNTKCCFCVRTGQSAWFVIAQTHEDMTRWMTAINAQIYSLFLK-------------------NFTPPADDYWGR--GTEGRFFYGMPETGASQWIYTHPEDGAPRTGEGIFPMEVVEVVQLLPMGEDMLWLRLADARGWTCGRNTKD-----------------------------GEPCLEQVAGEIVEDNSVYELPRNLEQMTHILCGPAMASEVTGEILAPGDRVQAVERFTPAGTKSGIVFIKMADGRGWCPIR 923 P+ + +E + V+ RQ R ++T F A+ +EG L K+ + RW+ +F LE+ L +Y+KK+L+G+ K KTL +TS S T+ TN K CFCV+TG WF++A+ + +WMTA+NA IY+L+++ ++ PP D+YW T F+ E QW+ PE APRTG+G+ P EVVEV Q + ++LRLAD RGW R+ D EQ+ G+ DN +Y Q I GP + S+ TG+ L PG +VQA RF P SG++FIK+ADGRGW P+R Sbjct: 1346 PRPIDYTEVRRASQVAARQ-------RESYKTKFVAALRADKVEGSLKKKTKVLDRWKARWFVLENTALEYYDKKALLGSDKKKTLPITSTSVTSATNLKDCFCVKTGDELWFLLAKDDAEKDKWMTAVNALIYALYVQRIAXXXXXXXXXXXXXXXXSYRPPQDNYWEAEGATNMHGFFRAIEASTPQWVRAFPELDAPRTGDGVVPGEVVEVEQAIEKRSGAVFLRLADERGWVLLRSPHDMFXXXXXXXXXXXXXXXXGGCVXXXXXXRSTALFEQLRGDATVDNKLYGFLDPKMQPVPIYAGPGLKSKPTGDSLTPGCKVQAAMRFLPYDL-SGMMFIKLADGRGWVPVR 1691
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Match: A0A6H5KNS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS5_9PHAE) HSP 1 Score: 154 bits (389), Expect = 9.870e-37 Identity = 76/87 (87.36%), Postives = 79/87 (90.80%), Query Frame = 3 Query: 3 SPPPKQLGESEAGSSKMVSTRQGPKSAVGRNHFETVFAEAMEGGNMEGHLMKQKRFTARWQTYYFKLEDGFLTHYEKKSLVGTRKNK 263 SPPPKQ E++A SSKMVSTR GPKSA GRNHFETVF EAMEGG MEGHLMKQKRFTARWQTYYFKLEDGFLTHY+KKSLVGTRK K Sbjct: 820 SPPPKQSSENDATSSKMVSTRLGPKSATGRNHFETVFQEAMEGGMMEGHLMKQKRFTARWQTYYFKLEDGFLTHYDKKSLVGTRKRK 906 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1509.3646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1509.3646.1 >prot_L-elsbetiae_contig1509.3646.1 ID=prot_L-elsbetiae_contig1509.3646.1|Name=mRNA_L-elsbetiae_contig1509.3646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp MVSTRQGPKSAVGRNHFETVFAEAMEGGNMEGHLMKQKRFTARWQTYYFKback to top mRNA from alignment at L-elsbetiae_contig1509:1098..5792+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1509.3646.1 ID=mRNA_L-elsbetiae_contig1509.3646.1|Name=mRNA_L-elsbetiae_contig1509.3646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4695bp|location=Sequence derived from alignment at L-elsbetiae_contig1509:1098..5792+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1509:1098..5792+ >mRNA_L-elsbetiae_contig1509.3646.1 ID=mRNA_L-elsbetiae_contig1509.3646.1|Name=mRNA_L-elsbetiae_contig1509.3646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig1509:1098..5792+ (Laminarionema elsbetiae ELsaHSoW15)back to top |