mRNA_L-elsbetiae_contig15088.3644.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15088.3644.1
Unique NamemRNA_L-elsbetiae_contig15088.3644.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A6H5L4A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A6_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 9.620e-142
Identity = 219/276 (79.35%), Postives = 238/276 (86.23%), Query Frame = 1
Query:   37 QFDFSKQDTPVRP-----TRHPDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDS-SVADRGLTKRTRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRLSRQPGKPEAAAAASRPT 846
            QFD S++   + P     +RHPDTRTSYDILNHVP+EKAHSVAL+Y + +GPEVLPQKVVTVEGGKKPHSH +RDVDVLSNRFLEKH+ERM EEKRFLR+ AEEKYRRTHDYNIIAGAYYDQ KER FV SREKL TMQGRAQQYRLPPSIRYGEGNGYNIINQQPK T+V   S SV DRGL+KRTRGRQ +EDN+RQHERAAA SEQ+ LNRPSH RH EVLRTGHNVISN+ F GREGKPPPQPRAKPP+PVWDRL  + G PEAAA  SRPT
Sbjct:   44 QFDVSRKSREMDPVLMRYSRHPDTRTSYDILNHVPKEKAHSVALIYPNDKGPEVLPQKVVTVEGGKKPHSHLRRDVDVLSNRFLEKHEERMTEEKRFLRERAEEKYRRTHDYNIIAGAYYDQDKEREFVNSREKLLTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKTTVVDMTSASVQDRGLSKRTRGRQTYEDNIRQHERAAAASEQQILNRPSHMRHVEVLRTGHNVISNQDFAGREGKPPPQPRAKPPMPVWDRLKGEHGMPEAAALGSRPT 319          
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: D8LS80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS80_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 1.070e-98
Identity = 163/209 (77.99%), Postives = 178/209 (85.17%), Query Frame = 1
Query:  229 SHKKRDVD--VLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDS-SVADRGLTKRTRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRLSRQPGKPEAAAAASRPT 846
            S K R++D  ++ +RFLEKH+ERM EEKRFLR+ AEEKYRRTHDYNIIAGAYYDQ KER FV SR+KL TMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKT+V   S SV DRGL+KRTRGRQ +EDN+RQHERAAA SEQR LNRPSH RH EVLRTGHNVISN+ F GREGKPPPQPRAKPP+PVWDRL  +   PEAAA  S PT
Sbjct:   32 SRKSREMDPVLMRHRFLEKHEERMTEEKRFLRERAEEKYRRTHDYNIIAGAYYDQDKERKFVNSRDKLLTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTVVDMTSASVQDRGLSKRTRGRQTYEDNIRQHERAAAASEQRTLNRPSHMRHVEVLRTGHNVISNQDFAGREGKPPPQPRAKPPMPVWDRLKGKHEMPEAAAIGSMPT 240          
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A7S1CID5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CID5_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.020e-17
Identity = 69/248 (27.82%), Postives = 117/248 (47.18%), Query Frame = 1
Query:   70 RPTRHPDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDSSVADRGLTKRTRGRQAHEDNVRQHERAAAIS---EQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRLSRQ 804
            RP    D+RT+Y+I+ ++   + H +             P++ +     K       RD D++SNR++E H+E+   ++   R AA E++ +T  +N +  AYYD+ KE  F ++  +     G  Q  RLPPS++  EG  YN+++ + +           DR   K ++ R   E   R   RA  +    EQR L+R S+QR  E  + G+N+++N  F G       + R+  P   W R   +
Sbjct:  121 RPPPRADSRTNYNIITNMGLHEHHYLPPGQRPPXXXXXXPKETLASRTTK-------RDFDLISNRYMEAHEEKDAVDREMQRQAAAERFWQTRSFNPVTCAYYDEKKEDAFKQTVAEETRTWGSKQFARLPPSVKVSEGVAYNVLSMEERNAEA---MRARDRIKAKASKARIGPEVEARVKARAEKVEDIMEQRTLHRVSYQRDREARKHGYNLLTNAPFQGLNSTTVFESRSAKPTSAWARAEEE 358          
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: F0XZ19_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ19_AURAN)

HSP 1 Score: 94.4 bits (233), Expect = 3.740e-17
Identity = 71/267 (26.59%), Postives = 133/267 (49.81%), Query Frame = 1
Query:   25 ILTHQFDFSKQDTPVRPT-RHPDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVT---VEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPK-KTIVKNDSSVADRGLTKR---TRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRLSR 801
            I+TH+F   K      P+ + PD+RTS++I+NH  ++              P   P+K V     E G  P S K+R+ D++SN+++  H  R + ++   + +A++ +  THD++ + G YYD  KE +F K R  L ++ G+    RLPP+++Y EG  Y+I++   K +  ++  S V +R +  +   +   +  + +V++ +R  + +  R                G++V+++    GR  +P    R K P   W +LS+
Sbjct:   93 IVTHEFRSGKTPAERAPSNKPPDSRTSWNIINHKAKD--------------PRAPPRKSVVDARAESGLLPASWKRREFDIVSNKYISDHKGRTLRDRTEAKHSAQKLFWETHDFDPLLGRYYDAGKEADFAKQRAVLSSIAGQGSVARLPPAVQYCEGAAYDIVSHAVKDQAKLEVASGVGNRAIASKKGPSVEAELRDRSVKRDDRDKSRALARFAKTVDFCEREGGRHHGYDVLTHESHVGRLARPMATMRIKKPDGPWQQLSK 345          
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A7S4DDP7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDP7_HETAK)

HSP 1 Score: 85.9 bits (211), Expect = 1.570e-15
Identity = 73/229 (31.88%), Postives = 110/229 (48.03%), Query Frame = 1
Query:   64 PVRPTRHPDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDS-SVADRGLTKR--TRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREG 741
            P    R PDTR +++ILNH         A   A    PE     VV     +KP++       +L+NRFL  HD ++  E+       EE++ +THDY+ I G YY   KE+ F   R     + G+AQ+ RLPPS+ + EG  Y+I+    K      ++ ++ADR L ++   R   A +    + E  AA    R+L R    R A    +G++ ++N  F GR G
Sbjct:    5 PAYRQRPPDTRLTFNILNHQTLPGHPEPAARSA----PEAGEAAVVPPARSRKPYN-------ILNNRFLHDHDGKVAAERAAAAARTEEQFWQTHDYHPIEGRYYHPDKEKEFEALRRAAAAVHGQAQRRRLPPSVVHSEGQTYDILTAAAKDARRAAEAEAIADRALRQKQGARTEAAQKTRALEEEDLAAA---RSLGRVHPARFAST--SGYDPLTNVGFQGRTG 217          
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A482T1S9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T1S9_9ARCH)

HSP 1 Score: 78.2 bits (191), Expect = 7.800e-12
Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = 1
Query:  241 RDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDS-SVADRGLTKRTRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRLS 798
            R+ +V+SN +   HD+R +E+   L+    +KY   HDY++I G +Y   K++ + +  E + ++QG AQ  RLPPS++Y +GN YN++          N + +V +R L  R +  Q   +     E  A   E   +NR   QR  + +  G N I+N++       P P P    P  +W RL+
Sbjct:  120 REFNVISNEYKVNHDKRRLEDFEKLKTHLLKKYWDNHDYDMIKGRFYSPEKQKLYEEHLETIKSVQGTAQMERLPPSLKYSDGNSYNLLTHDVYDQEKLNSTLTVTNRSLN-RVKKLQKEAEQKANGELEAQAKEHLHMNRIKFQRWEQQVDRGFNFITNQVV---HETPAPLPCR--PATMWARLT 300          
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A7S3NS64_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3NS64_EUPCR)

HSP 1 Score: 75.1 bits (183), Expect = 7.940e-11
Identity = 60/194 (30.93%), Postives = 101/194 (52.06%), Query Frame = 1
Query:  241 RDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDSSVADRGLT-KRTRGRQAHEDNVRQHERAAAISEQR-----ALNRPSHQRHAEVLRTGHNVISNRIFTGR--EG-KPPPQPRAKPPVPVWDRL 795
            RD ++++NR+LE +DE++V +K   R  A +KY +THDY+ +   YYD  KE+ FV  RE    + G+    +LP S +  EG  YN IN +     ++++  + +R L  K  R R     ++ +H R   + E       +LN+ + QR  +    G ++++N+ F     EG K   +P  KPP   W ++
Sbjct:  167 RDYNIITNRYLELNDEKVVVDKEIERLNAAKKYWKTHDYDPVNTQYYDPDKEQEFVDEREHNAKIHGQDWVQKLPKSWKE-EGGLYNPINGK-----IEDEKRLWERDLKEKNKRKRYEKRYDMERHARKVGLGEDERQQKISLNKVNIQRFRDTTERGFDILTNKQFNNPVDEGSKTLHEPFVKPPASTWTKI 354          
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: Q24FD2_TETTS (Uncharacterized protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q24FD2_TETTS)

HSP 1 Score: 69.7 bits (169), Expect = 4.990e-9
Identity = 57/206 (27.67%), Postives = 108/206 (52.43%), Query Frame = 1
Query:  103 YDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPK--KTIVKNDSSVADRGLTKRTRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVIS 714
            Y+I+++ P EK      MY   E  +VL Q+ V +E  KK    K RD ++++N++ E H+ ++  ++  +++  +EKYR+TH +NI++G  YD  +E+ F +  ++     G+    +LPPS+RY E   ++     P+  K I +   +   R   +     + HE N+   +R     +QR LN    Q++ +  + G ++I+
Sbjct:  119 YNIISNTPLEK-----YMY---ENVKVLKQEKV-IE--KKTDLSKTRDFNIITNKYTENHETKIQNDEETVKNKLDEKYRKTHKFNIVSGLLYDPDQEKAFQEQLKETNQSHGKNAILKLPPSLRYRETVIFDRNKPIPEELKLIDQQRENAKKRYKIRYAVENEYHERNLEIQDRR----QQRLLNGLCDQKYLDEYKKGFDIIT 309          
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A812V6G6_9DINO (TruC protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812V6G6_9DINO)

HSP 1 Score: 59.7 bits (143), Expect = 6.690e-6
Identity = 64/255 (25.10%), Postives = 118/255 (46.27%), Query Frame = 1
Query:   85 PDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGE-GNGYNIINQQPKKTIVKNDSSVADRGLTKRTRGRQAHEDNVRQHERAA-AISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRL-SRQPGKPEAAAAASR 840
            PDT   Y+I++++P  + H           P+  P+    +   +   +   +D ++L+NR+LE H E+M  ++      A EK R+T  +N +   + D   E       + L T + + +   + P I  G   N Y+++N Q K   + +    AD     R R R   E+N ++ + A+ A + Q   NR +H+R A  +  G ++++N+ F G++GK       +P    W +    +P  P +A + SR
Sbjct:  119 PDTAADYNIISNLPFNEHHWAH--------PDHRPRPSQRIPKQRMAPAMLHKDFNILTNRYLEHHKEKMDRDRELNLLEAAEKLRQTSAFNPVQQRFCDPRHEERMRACEDAL-TTEIKLRGEEVQPLIYRGSVTNAYDMLNHQVKDPDLLHLIEGADEERKVRFRTRHQLEENTKKMDVASDARAMQMKANRVAHERFAPSIERGFDILTNQDF-GQKGKQIHTSNTRPHQTPWQKACENRPTPPPSALSTSR 363          
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A1Q9DWL2_SYMMI (tRNA pseudouridine synthase C n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DWL2_SYMMI)

HSP 1 Score: 59.3 bits (142), Expect = 1.120e-5
Identity = 67/271 (24.72%), Postives = 127/271 (46.86%), Query Frame = 1
Query:   85 PDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGE-GNGYNIINQQPKKTIVKNDSSVADRGLTKRTRGRQAHEDNVRQHERAA-AISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRL-SRQPGKPEAAAAASRPTRGQDGSQREEEGIS 888
            PDT   Y+I++++P  + H           P+  P+    +   +   +   +D ++L+N++LE H E+M  ++      A EK R+T  +N +   + D   E       + L T + + +   + P I  G   N Y+++N Q K   + +    AD     R R R   E+N ++ + A  A + Q   NR +H+R A  +  G ++++N+ F G++GK       +P    W ++   +P  P +A + SR    Q+ +++ E+G S
Sbjct:  119 PDTAADYNIISNLPFNEHHWAH--------PDHRPRPSQRIPKQRMAPAMLHKDFNILTNKYLEHHKEKMDRDRELNLLEAAEKLRQTSAFNPVQQRFCDPRHEERMRACEDAL-TTEIKLRGEEVQPLIYRGSVTNAYDMLNHQVKDRDLLHLIEGADEERKVRFRTRHQLEENTKKMDVAYDARAMQMKANRVAHERFAPTVERGFDILTNQDF-GQKGKQIHTSNTRPHQTPWQKVCENRPTPPPSAKSTSREV-AQEATEKAEQGQS 378          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5L4A6_9PHAE9.620e-14279.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS80_ECTSI1.070e-9877.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CID5_9STRA2.020e-1727.82Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
F0XZ19_AURAN3.740e-1726.59Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4DDP7_HETAK1.570e-1531.88Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A482T1S9_9ARCH7.800e-1230.48Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3NS64_EUPCR7.940e-1130.93Hypothetical protein (Fragment) n=1 Tax=Euplotes c... [more]
Q24FD2_TETTS4.990e-927.67Uncharacterized protein n=1 Tax=Tetrahymena thermo... [more]
A0A812V6G6_9DINO6.690e-625.10TruC protein n=2 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A1Q9DWL2_SYMMI1.120e-524.72tRNA pseudouridine synthase C n=2 Tax=Symbiodinium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15088contigL-elsbetiae_contig15088:597..2780 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.5
Seed ortholog evalue1.6e-15
Seed eggNOG ortholog4787.PITG_11222T0
Hectar predicted targeting categoryother localisation
EggNOG OGs2AXZZ@1,2S023@2759,3QDTH@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_004500.1
Exons3
Model size1471
Cds size987
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15088.3644.1prot_L-elsbetiae_contig15088.3644.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15088 928..2627 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815612.4578989-UTR-L-elsbetiae_contig15088:596..9271622815612.4578989-UTR-L-elsbetiae_contig15088:596..927Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15088 597..927 -
1691682990.9938135-UTR-L-elsbetiae_contig15088:596..9271691682990.9938135-UTR-L-elsbetiae_contig15088:596..927Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15088 597..927 -
1622815612.5102398-UTR-L-elsbetiae_contig15088:2627..27801622815612.5102398-UTR-L-elsbetiae_contig15088:2627..2780Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15088 2628..2780 -
1691682991.033569-UTR-L-elsbetiae_contig15088:2627..27801691682991.033569-UTR-L-elsbetiae_contig15088:2627..2780Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15088 2628..2780 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815612.4725778-CDS-L-elsbetiae_contig15088:927..15511622815612.4725778-CDS-L-elsbetiae_contig15088:927..1551Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15088 928..1551 -
1691682991.0054398-CDS-L-elsbetiae_contig15088:927..15511691682991.0054398-CDS-L-elsbetiae_contig15088:927..1551Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15088 928..1551 -
1622815612.4850202-CDS-L-elsbetiae_contig15088:1974..22241622815612.4850202-CDS-L-elsbetiae_contig15088:1974..2224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15088 1975..2224 -
1691682991.0152714-CDS-L-elsbetiae_contig15088:1974..22241691682991.0152714-CDS-L-elsbetiae_contig15088:1974..2224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15088 1975..2224 -
1622815612.500091-CDS-L-elsbetiae_contig15088:2514..26271622815612.500091-CDS-L-elsbetiae_contig15088:2514..2627Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15088 2515..2627 -
1691682991.0248833-CDS-L-elsbetiae_contig15088:2514..26271691682991.0248833-CDS-L-elsbetiae_contig15088:2514..2627Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15088 2515..2627 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15088.3644.1

>prot_L-elsbetiae_contig15088.3644.1 ID=prot_L-elsbetiae_contig15088.3644.1|Name=mRNA_L-elsbetiae_contig15088.3644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=329bp
MYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEE
KRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQ
YRLPPSIRYGEGNGYNIINQQPKKTIVKNDSSVADRGLTKRTRGRQAHED
NVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPP
QPRAKPPVPVWDRLSRQPGKPEAAAAASRPTRGQDGSQREEEGISSAATA
PSKGGRDLRNRGGSGDSSRRGGRGEDNSDRGNEQGRTCRQPLPGEESGAD
AGKSTKAANATSHPKPTVPPLDLSLHPS*
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mRNA from alignment at L-elsbetiae_contig15088:597..2780-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15088.3644.1 ID=mRNA_L-elsbetiae_contig15088.3644.1|Name=mRNA_L-elsbetiae_contig15088.3644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2184bp|location=Sequence derived from alignment at L-elsbetiae_contig15088:597..2780- (Laminarionema elsbetiae ELsaHSoW15)
CGGGTAAAAATTATTTACGAGTTTATCTTGACCCACCAATTCGACTTTTC GAAACAGGATACTCCCGTAAGACCTACTCGGCATCCTGATACGAGGACTT CTTACGACATCCTCAACCACGTACCGAGGGAGAAGGCTCATTCTGTGGCG TTGATGTATGCTGACGGCGAGGGGCCGGAGGTGTTGCCCCAGAAGGTGGT GACTGTGGAAGGCGGCAAGAAGCCCCACAGCCACAAGAAACGAGATGTAG ACGTCTTGAGCAACAGGTGCGTATGGCTTCTGGAAGAGTAGCTATGTGAC AAGGGGCGACCGTTGAAAAACTATGGGCGACGAACAGGGGCAAGCGGGAG GAATGCTACGTGAAAGAGGAGGACGAACTGTACACGCCTCAAGAGGATTC GGGTGATGTAAGGCCTGCGCGCTCGCACGAAGAATCTTGCTTCAAACATT TTTTTTTGATGCAATCTACTTCGAGAATAAGAGCGCCTGGCGATGTATAA GAGAGCACGCTCATTCCTGCCCCAACCGTTGATTTCCGTCCGCCTGATAC AACCAGGTTCTTGGAGAAACACGATGAGCGTATGGTCGAAGAAAAGCGCT TCCTGCGAGATGCCGCCGAGGAAAAGTACCGTCGTACACACGACTACAAC ATCATTGCGGGAGCGTACTACGACCAGACTAAGGAGCGTAATTTCGTGAA GTCCAGGGAGAAGCTCGGAACAATGCAAGGGCGAGCGCAGCAGTATCGCT TGCCGCCGAGCATTCGATACGGTGAAGGAAACGGCTACAATATCATCAAC CAGCAGGTATGCGGCACTACTGTATTTCGGATGCGGAAACTGTTGCCGCA AGCCTCTTGCCTCTTTTCCACTTTTACCCCCCGTTTGTTATTTGTGGTGG CTACGTTGCTCTGTTCAGTGCATGCTTCTTCTGTGCACCACAGGAAGTAA ACCACCCGGTGAGGTTTTGGAAAGGGCAGACCTACGCACCGAATGGATAC CGACAGGCTGAGTATCTATTTTTAGAACAAAATAGAAGCGCGCTCGCCAC GACCATGGAAGGTAGTGAGTGTTGACACAACGGATGCCTCCCTCTGGTCG AAGGCCAAAAACAATCGCACCACCGCTAGCGTCGATGTCGTCATTCTTTG AAATCCAACCCAAACGCTCTCTCGTCTTTGTGCCCACAACACATCATACT ACCCTTTCCGCGTGGGCAAAAAACGACAGCCGAAGAAAACGATCGTGAAA AACGACTCTTCCGTGGCGGATCGCGGCCTCACCAAGCGCACGCGGGGCCG CCAAGCGCACGAGGACAACGTCCGCCAGCACGAACGTGCGGCCGCTATCA GCGAGCAGCGGGCTCTCAACCGCCCTTCCCATCAGCGGCACGCTGAAGTT CTCCGGACCGGGCACAACGTCATCTCCAACCGAATATTCACGGGACGGGA AGGAAAGCCGCCCCCGCAGCCCCGCGCGAAACCGCCGGTACCTGTCTGGG ACAGGCTTTCCAGACAACCAGGGAAACCGGAAGCGGCCGCGGCAGCGTCG AGGCCGACACGCGGACAGGATGGGAGTCAAAGAGAAGAAGAGGGTATTTC TTCCGCAGCGACGGCTCCTAGTAAGGGTGGACGGGATCTGAGAAACCGGG GCGGCAGCGGCGATAGTAGCAGGCGTGGTGGCCGCGGGGAGGACAACAGT GATCGCGGCAACGAGCAGGGAAGGACTTGTCGCCAGCCGCTGCCGGGAGA GGAGAGTGGCGCTGATGCAGGAAAGTCGACGAAGGCGGCGAATGCAACGT CACATCCGAAGCCGACCGTGCCCCCCTTGGACCTTTCTCTGCACCCGAGT TGATAAGCCCCATGGGGGGACTGTCGCCAAAATAAATGGGAAGGACACAC ACACACCGGCGCGGCGCTTCAAGAGTATAAGCAGGGCTTCTGGAGCCAAG CACACGTGGGACGTGGACCACTAGTTGTACTCATCACTCTAGCGCTGTCT TGATGACTTTGAGAGAACTGATAGATCTACATATGTACGCGCCATGTACC ACGAAAGTCCGAGAAATTCTACACCATCGCGACCACAGAGTGCATAGGAA GGCTATGTAGGTCGAAAGATCCGGTCAAAGACACACCGCACATTATCGAG AGATCGATGGTCGTCCGAATGAGGTCAAAGAATG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15088:597..2780-

>mRNA_L-elsbetiae_contig15088.3644.1 ID=mRNA_L-elsbetiae_contig15088.3644.1|Name=mRNA_L-elsbetiae_contig15088.3644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1974bp|location=Sequence derived from alignment at L-elsbetiae_contig15088:597..2780- (Laminarionema elsbetiae ELsaHSoW15)
ATGTATGCTGACGGCGAGGGGCCGGAGGTGTTGCCCCAGAAGGTGGTGAC
TGTGGAAGGCGGCAAGAAGCCCCACAGCCACAAGAAACGAGATGTAGACG
TCTTGAGCAACAGATGTATGCTGACGGCGAGGGGCCGGAGGTGTTGCCCC
AGAAGGTGGTGACTGTGGAAGGCGGCAAGAAGCCCCACAGCCACAAGAAA
CGAGATGTAGACGTCTTGAGCAACAGGTTCTTGGAGAAACACGATGAGCG
TATGGTCGAAGAAAAGCGCTTCCTGCGAGATGCCGCCGAGGAAAAGTACC
GTCGTACACACGACTACAACATCATTGCGGGAGCGTACTACGACCAGACT
AAGGAGCGTAATTTCGTGAAGTCCAGGGAGAAGCTCGGAACAATGCAAGG
GCGAGCGCAGCAGTATCGCTTGCCGCCGAGCATTCGATACGGTGAAGGAA
ACGGCTACAATATCATCAACCAGCAGGTTCTTGGAGAAACACGATGAGCG
TATGGTCGAAGAAAAGCGCTTCCTGCGAGATGCCGCCGAGGAAAAGTACC
GTCGTACACACGACTACAACATCATTGCGGGAGCGTACTACGACCAGACT
AAGGAGCGTAATTTCGTGAAGTCCAGGGAGAAGCTCGGAACAATGCAAGG
GCGAGCGCAGCAGTATCGCTTGCCGCCGAGCATTCGATACGGTGAAGGAA
ACGGCTACAATATCATCAACCAGCAGCCGAAGAAAACGATCGTGAAAAAC
GACTCTTCCGTGGCGGATCGCGGCCTCACCAAGCGCACGCGGGGCCGCCA
AGCGCACGAGGACAACGTCCGCCAGCACGAACGTGCGGCCGCTATCAGCG
AGCAGCGGGCTCTCAACCGCCCTTCCCATCAGCGGCACGCTGAAGTTCTC
CGGACCGGGCACAACGTCATCTCCAACCGAATATTCACGGGACGGGAAGG
AAAGCCGCCCCCGCAGCCCCGCGCGAAACCGCCGGTACCTGTCTGGGACA
GGCTTTCCAGACAACCAGGGAAACCGGAAGCGGCCGCGGCAGCGTCGAGG
CCGACACGCGGACAGGATGGGAGTCAAAGAGAAGAAGAGGGTATTTCTTC
CGCAGCGACGGCTCCTAGTAAGGGTGGACGGGATCTGAGAAACCGGGGCG
GCAGCGGCGATAGTAGCAGGCGTGGTGGCCGCGGGGAGGACAACAGTGAT
CGCGGCAACGAGCAGGGAAGGACTTGTCGCCAGCCGCTGCCGGGAGAGGA
GAGTGGCGCTGATGCAGGAAAGTCGACGAAGGCGGCGAATGCAACGTCAC
ATCCGAAGCCGACCGTGCCCCCCTTGGACCTTTCTCTGCACCCGAGTTGA
CCGAAGAAAACGATCGTGAAAAACGACTCTTCCGTGGCGGATCGCGGCCT
CACCAAGCGCACGCGGGGCCGCCAAGCGCACGAGGACAACGTCCGCCAGC
ACGAACGTGCGGCCGCTATCAGCGAGCAGCGGGCTCTCAACCGCCCTTCC
CATCAGCGGCACGCTGAAGTTCTCCGGACCGGGCACAACGTCATCTCCAA
CCGAATATTCACGGGACGGGAAGGAAAGCCGCCCCCGCAGCCCCGCGCGA
AACCGCCGGTACCTGTCTGGGACAGGCTTTCCAGACAACCAGGGAAACCG
GAAGCGGCCGCGGCAGCGTCGAGGCCGACACGCGGACAGGATGGGAGTCA
AAGAGAAGAAGAGGGTATTTCTTCCGCAGCGACGGCTCCTAGTAAGGGTG
GACGGGATCTGAGAAACCGGGGCGGCAGCGGCGATAGTAGCAGGCGTGGT
GGCCGCGGGGAGGACAACAGTGATCGCGGCAACGAGCAGGGAAGGACTTG
TCGCCAGCCGCTGCCGGGAGAGGAGAGTGGCGCTGATGCAGGAAAGTCGA
CGAAGGCGGCGAATGCAACGTCACATCCGAAGCCGACCGTGCCCCCCTTG
GACCTTTCTCTGCACCCGAGTTGA
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