mRNA_L-elsbetiae_contig1508.3640.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1508.3640.1
Unique NamemRNA_L-elsbetiae_contig1508.3640.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: D7FTW6_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW6_ECTSI)

HSP 1 Score: 598 bits (1543), Expect = 3.180e-206
Identity = 371/543 (68.32%), Postives = 404/543 (74.40%), Query Frame = 1 
Query:   79 TAVVMPPSPEAAVGSSSGLPAKTFGGTHHVAGEAVPPAPASEEGSPSPCLPPSPAAAAAAVDGSVSPPAD------------TSGKEDAAE--GPLEQLSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSKATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGS-----KNSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAAANKKARQEQKDRTTNSRPPAERVEPGGGNVRDGQMRSRSLTELELENAAGXXXXXXXXXXXXGTRMSPPHHTRASREDGXXXXXXXXXXXXXXXXXXXPRSVSNADALYSGSGGCAGGGVENGSPPRHAMGGAGDRLPRKGVVQTLSSEGWSWIKKDGTGSRKSGNRVPFAMADVVMKDGEQ-QPLQKGDHVEYRAWKDSEGRLMAVRVERVKERPRPAGXXXXXXXNRAAQAHFR 1647
            TAVV+PPSPE  V SS+ +P  T         E V  APASEE S        P       +G ++P               TSGKED AE   P+E+L ++T AALVKQVEFYFSDENLPTDAFMKKK+KAGG QGWVPLKVIC+FPKVKK+SKDIRAIA ALE S +LVV+KATRVRRKTP+KFPDKDG +DVT+RTVVAVNIPAESTVESLTPFFS+CGVAE IRV+HKSK  G+     ++S IQAP GPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAA+NKKA+QEQK R  NSR P +R   G  NVRDGQMRSRSLTELELE  AG        XXXX                 XXXXXXXXXX         PRSVSN DAL+S S G +GGG+ENGSPPRH MG AGD LPRKGVVQTLSSEGWSWIKKDG GSRKSGNR+PF M DVVMKDGEQ QPLQKGDHVEYR WKD+EGR MAVRVER KERPRPAG       +R+ QAHFR
Sbjct:    7 TAVVVPPSPEPVVASSAKMPLDT---------ETVA-APASEEAS-------GPVVVEDGENG-LAPXXXXXXXXXXXXXXXTSGKEDTAEVAPPVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKMSKDIRAIALALEDSQALVVAKATRVRRKTPFKFPDKDGRADVTSRTVVAVNIPAESTVESLTPFFSSCGVAELIRVIHKSKTAGTTKTDNRSSGIQAPAGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAASNKKAKQEQKQRV-NSRSPVDR---GQRNVRDGQMRSRSLTELELERTAGASGGASSRXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXGEAAPTTRKPRSVSNVDALFSSSTGGSGGGIENGSPPRHTMGSAGDGLPRKGVVQTLSSEGWSWIKKDGQGSRKSGNRIPFVMGDVVMKDGEQRQPLQKGDHVEYRVWKDTEGRSMAVRVERAKERPRPAGGAVGSG-SRSTQAHFR 525
[Close]
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 4.040e-36
Identity = 95/139 (68.35%), Postives = 109/139 (78.42%), Query Frame = 1 
Query:  190 APASEEGS--------PSPCLPPSPAAAAAAVDGSVSPPADTSGKEDAAEGP-LEQLSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSKATRVRRK 579
            APASEEGS         S   PP+  A++AAV  S     +T+GKED +E P +E+L ++T AALVKQVEFYFSDENLPTDAFMKKK+KAGG QGWVPLKVIC+FPKVKKLSKDIRAIA ALE S +LVV+KATRVRRK
Sbjct: 1116 APASEEGSGPVVAEDGESGLAPPAAMASSAAVVSSD----ETNGKEDTSEAPPVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRK 1250
[Close]
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: A0A5J4Y4J7_9CHLO (La-related 7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4J7_9CHLO)

HSP 1 Score: 140 bits (352), Expect = 7.700e-33
Identity = 79/183 (43.17%), Postives = 115/183 (62.84%), Query Frame = 1 
Query:  349 AALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSKATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGSKNSEIQ-APVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 894
            A +VKQV FYFSD NLPTD F+ K+++    +GWVP+++I +F ++K LSKDI+ IAAALE S+ LVVS   RVRRK P    D+   ++V  RT +  N+P ++T++SLT  FSA G  + +R+   +    S    I  A +  +R L+A  +F   E+   AV +LTD  +WR GLR ++
Sbjct:   50 AKIVKQVNFYFSDTNLPTDNFLLKEVRKTP-EGWVPIRLIASFKRMKSLSKDIKVIAAALETSTELVVS-GHRVRRKEPLPQVDE---TEVLYRTAIVDNLPDQATIDSLTGMFSAAGKVKMVRICQPNSGPRSIAQSIPGADLAVSRQLHALIEFENQEQVAAAVKQLTDSNNWRSGLRAAI 227
[Close]
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: C1E3K5_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E3K5_MICCC)

HSP 1 Score: 134 bits (338), Expect = 1.490e-30
Identity = 88/196 (44.90%), Postives = 118/196 (60.20%), Query Frame = 1 
Query:  331 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKD---IRAIAAAL-EGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVH---KSKNDGSKNSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 894
            L+DE    +VKQVEFYFSD NLPTDAF+ KK++A    G+VP+ V+C F ++K L K    I  +AA L + S +LVVS+   RVRR TP   PD D + DV ARTVVA N   + T+ES+   FSA G    +RV H   ++    +K S +     P+  ++A  +F+T ++A RA   L D K WR GLRV L
Sbjct:   59 LTDEQVDKIVKQVEFYFSDANLPTDAFLMKKVRADP-NGFVPIGVVCGFNRMKTLLKKHPPIETVAAILRQHSEALVVSEDGIRVRRATP--LPDID-LEDVQARTVVAENFKTQPTIESVRDLFSAAGDVAMVRVRHPGMQTPAGATKPSGLDLIATPSNAVHALIEFNTRDDAARAAETLNDDKDWRNGLRVRL 250
[Close]
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: D8QWC1_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QWC1_SELML)

HSP 1 Score: 131 bits (329), Expect = 1.660e-30
Identity = 81/197 (41.12%), Postives = 119/197 (60.41%), Query Frame = 1 
Query:  331 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGSKNSEIQAPVGPN--------RDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 894
            LS++T   +V+QVEFYFSD NLPTD ++ K +K    +G+VP+ +I +F K+K+L+K+  A+AAAL  SS LVVS+   +VRR  P    D D   ++  RTVVA N+P + +++SL   F   G  + +RV       GS NS   A +  +          L+A  ++ TLE+A +AV ELTD+++WR GL V L
Sbjct:   76 LSEDTRTQVVQQVEFYFSDANLPTDNYLMKFIKKDP-EGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADIDLD---EIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEP----GSANSVNSAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 264
[Close]
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: A0A7S0IBH0_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IBH0_MICPS)

HSP 1 Score: 131 bits (329), Expect = 3.300e-30
Identity = 86/196 (43.88%), Postives = 117/196 (59.69%), Query Frame = 1 
Query:  331 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKD---IRAIAAAL-EGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVH---KSKNDGSKNSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 894
            L+DE    +VKQVEFYFSD NLPTDAF+ KK++A    G+VP+ V+C F ++K L K    I  +AA L + S +LVVS+   RV+R TP   PD D + DV ARTVVA N   + T+ES+   FSA G    +RV H   ++    +K S +     P+  ++A  +F T ++A RA   L D + WR GLRV L
Sbjct:   73 LTDEQVDKIVKQVEFYFSDANLPTDAFLMKKVRADP-NGFVPIGVVCGFNRMKTLLKKHPPIETVAAILRQHSEALVVSEDGIRVQRATP--LPDID-LEDVQARTVVAENFKTQPTIESVRDLFSAAGDVAMVRVRHPGMQTPAGATKPSGLDLIATPSNAVHALIEFKTRDDAARAAETLNDDEDWRNGLRVRL 264
[Close]
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: UPI000D1C965E (la-related protein 6C n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C965E)

HSP 1 Score: 134 bits (336), Expect = 1.460e-29
Identity = 79/193 (40.93%), Postives = 119/193 (61.66%), Query Frame = 1 
Query:  331 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGSKNSEIQAPVGPNR----DLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 894
            LS++T A +V+QVEFYFSD NLPTD ++ K +K    +G+VP+ +I +F K+K+L+K+  A+AAAL  SS LVVS+   +VRR  P    D D   ++  RTVVA N+P + +++SL   F   G  + +RV      +   N+ +      +R     L+A  ++ TLE+A +AV ELTD+++WR GL V L
Sbjct:  173 LSEDTRAQVVQQVEFYFSDANLPTDNYLMKFIKKDP-EGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADIDLD---EIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEPGSANSVNNAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 361
[Close]
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: A0A2R6XE71_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XE71_MARPO)

HSP 1 Score: 133 bits (334), Expect = 3.330e-29
Identity = 76/191 (39.79%), Postives = 123/191 (64.40%), Query Frame = 1 
Query:  331 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGSKNS--EIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 894
            +++E  A +VKQVEFYFSD+NLPTD ++ K +K    +G+VP+ V+ +F K+K L K+   +AAAL  S+ LVVS+   +VRR  P   PD D + +V +RTVVA N+P + ++ES+   F + G  + +R+      +G+  +  + ++ +  +  L+A  +F T+E+A +AV+ LTD ++WR GLRV L
Sbjct:  195 VNEELKAKIVKQVEFYFSDQNLPTDNYLMKFVKKDP-EGFVPIPVVASFRKIKNLVKNHGIVAAALRNSTLLVVSEDGKKVRRAQP--LPDVD-LEEVQSRTVVAENLPEDHSIESVEQLFGSVGNVKMVRICQPEAANGASQTAAKFKSDMVVSNKLHALIEFETVEQAEKAVSALTDERNWRSGLRVRL 381
[Close]
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: A0A2K1LA96_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LA96_PHYPA)

HSP 1 Score: 132 bits (332), Expect = 9.710e-29
Identity = 78/192 (40.62%), Postives = 118/192 (61.46%), Query Frame = 1 
Query:  331 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIRAIAAALEGSSSLVVSK-ATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAESTVESLTPFFSACGVAEAIRVVHKSKNDGSKNSEIQAPVGP---NRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSL 894
            L++ET A +VKQVEFYFSD NLPTD ++ K +K    +G+VP+ V+ +F K+K L K+   +AA L  S+ LVVS+   +VRR  P   P+ D + ++ ARTVVA N+P + ++ESL   F   G  + +R+      +G+  +  + P      +  L+A  ++ T+E A +AV ELTD ++WR GLRV L
Sbjct:  241 LTEETKAKIVKQVEFYFSDTNLPTDNYLMKFVKKDS-EGFVPIPVVASFRKIKNLVKNHGVLAATLRNSTQLVVSEDGKKVRRAHP--LPEVD-LEEIQARTVVAENLPEDHSIESLEQLFGKVGTVKMVRICSPEAANGANATGAKHPKTDMLVSNKLHALVEYETVELAEKAVAELTDERNWRSGLRVRL 428
[Close]
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Match: C1N3J9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3J9_MICPC)

HSP 1 Score: 128 bits (322), Expect = 3.180e-28
Identity = 82/201 (40.80%), Postives = 114/201 (56.72%), Query Frame = 1 
Query:  331 LSDETNAALVKQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSK----DIRAIAAALEGSSSLVVSKA-TRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAES-----TVESLTPFFSACGVAEAIRVVHKSKND-----GSKNSEIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRV 888
            L+ E    +  QVEFYFSD NLPTDAF+ KK++AGG +GWVPL VIC+F ++K+L K     +     A  GS+ LV   A T VRR  P   PD D + +V +RTV+A N P  +     T+E++   F++ G    +RV H           +K+S +     PN  ++A  +F T EEA+RAV  L + + WR GLRV
Sbjct:   73 LTAEQKEKIFAQVEFYFSDANLPTDAFLMKKVRAGGDEGWVPLDVICSFNRMKQLLKKRPHSVVCDVLAELGSALLVSDDAKTAVRRVAP--LPDVD-LEEVQSRTVLAENFPGVNAGEAPTIEAVRELFASAGEVLVVRVRHPGMTQPAGVAAAKSSGLDLIQTPNAHVHALVEFKTAEEALRAVTTLNNDRDWRNGLRV 270
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1508.3640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTW6_ECTSI3.180e-20668.32HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5JW40_9PHAE4.040e-3668.35HTH La-type RNA-binding domain-containing protein ... [more]
A0A5J4Y4J7_9CHLO7.700e-3343.17La-related 7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608... [more]
C1E3K5_MICCC1.490e-3044.90Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
D8QWC1_SELML1.660e-3041.12Uncharacterized protein (Fragment) n=2 Tax=Selagin... [more]
A0A7S0IBH0_MICPS3.300e-3043.88Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
UPI000D1C965E1.460e-2940.93la-related protein 6C n=2 Tax=Selaginella moellend... [more]
A0A2R6XE71_MARPO3.330e-2939.79Uncharacterized protein n=3 Tax=Marchantia polymor... [more]
A0A2K1LA96_PHYPA9.710e-2940.63Uncharacterized protein n=1 Tax=Physcomitrium pate... [more]
C1N3J9_MICPC3.180e-2840.80Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1508contigL-elsbetiae_contig1508:2900..11953 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score610.1
Seed ortholog evalue1.1e-171
Seed eggNOG ortholog2880.D7FTW6
Preferred nameLARP6
KEGG koko:K15191,ko:K18733
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005844,GO:0006417,GO:0008092,GO:0008150,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010712,GO:0010714,GO:0017022,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032965,GO:0032967,GO:0032991,GO:0034248,GO:0034250,GO:0035613,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044093,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050794,GO:0051098,GO:0051099,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0080090,GO:0097159,GO:1901363,GO:1902415,GO:1902416,GO:1905214,GO:1905216,GO:1990825,GO:1990904,GO:2000112
EggNOG free text desc.RNA processing
EggNOG OGsCOG5193@1,KOG1855@2759
COG Functional cat.JO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019,ko03021
Ec32 ortholog descriptionRNA-binding protein Lupus La
Ec32 orthologEc-12_002800.1
Exons12
Model size2095
Cds size1842
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1508.3640.1prot_L-elsbetiae_contig1508.3640.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1508 2960..11760 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815612.157229-UTR-L-elsbetiae_contig1508:2899..29591622815612.157229-UTR-L-elsbetiae_contig1508:2899..2959Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1508 2900..2959 +
1691682990.809348-UTR-L-elsbetiae_contig1508:2899..29591691682990.809348-UTR-L-elsbetiae_contig1508:2899..2959Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1508 2900..2959 +
1622815612.3117604-UTR-L-elsbetiae_contig1508:11760..119531622815612.3117604-UTR-L-elsbetiae_contig1508:11760..11953Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1508 11761..11953 +
1691682990.9233048-UTR-L-elsbetiae_contig1508:11760..119531691682990.9233048-UTR-L-elsbetiae_contig1508:11760..11953Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1508 11761..11953 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815612.171952-CDS-L-elsbetiae_contig1508:2959..30571622815612.171952-CDS-L-elsbetiae_contig1508:2959..3057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 2960..3057 +
1691682990.8205922-CDS-L-elsbetiae_contig1508:2959..30571691682990.8205922-CDS-L-elsbetiae_contig1508:2959..3057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 2960..3057 +
1622815612.182595-CDS-L-elsbetiae_contig1508:3751..39091622815612.182595-CDS-L-elsbetiae_contig1508:3751..3909Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 3752..3909 +
1691682990.8283145-CDS-L-elsbetiae_contig1508:3751..39091691682990.8283145-CDS-L-elsbetiae_contig1508:3751..3909Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 3752..3909 +
1622815612.1921654-CDS-L-elsbetiae_contig1508:5424..55531622815612.1921654-CDS-L-elsbetiae_contig1508:5424..5553Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 5425..5553 +
1691682990.8360147-CDS-L-elsbetiae_contig1508:5424..55531691682990.8360147-CDS-L-elsbetiae_contig1508:5424..5553Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 5425..5553 +
1622815612.2019043-CDS-L-elsbetiae_contig1508:5921..60551622815612.2019043-CDS-L-elsbetiae_contig1508:5921..6055Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 5922..6055 +
1691682990.8439102-CDS-L-elsbetiae_contig1508:5921..60551691682990.8439102-CDS-L-elsbetiae_contig1508:5921..6055Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 5922..6055 +
1622815612.2160592-CDS-L-elsbetiae_contig1508:6626..66861622815612.2160592-CDS-L-elsbetiae_contig1508:6626..6686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 6627..6686 +
1691682990.8514764-CDS-L-elsbetiae_contig1508:6626..66861691682990.8514764-CDS-L-elsbetiae_contig1508:6626..6686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 6627..6686 +
1622815612.2282805-CDS-L-elsbetiae_contig1508:7312..74251622815612.2282805-CDS-L-elsbetiae_contig1508:7312..7425Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 7313..7425 +
1691682990.8590295-CDS-L-elsbetiae_contig1508:7312..74251691682990.8590295-CDS-L-elsbetiae_contig1508:7312..7425Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 7313..7425 +
1622815612.2431018-CDS-L-elsbetiae_contig1508:8234..83191622815612.2431018-CDS-L-elsbetiae_contig1508:8234..8319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 8235..8319 +
1691682990.8667927-CDS-L-elsbetiae_contig1508:8234..83191691682990.8667927-CDS-L-elsbetiae_contig1508:8234..8319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 8235..8319 +
1622815612.2578154-CDS-L-elsbetiae_contig1508:9018..91581622815612.2578154-CDS-L-elsbetiae_contig1508:9018..9158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 9019..9158 +
1691682990.8744051-CDS-L-elsbetiae_contig1508:9018..91581691682990.8744051-CDS-L-elsbetiae_contig1508:9018..9158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 9019..9158 +
1622815612.2694151-CDS-L-elsbetiae_contig1508:9664..100181622815612.2694151-CDS-L-elsbetiae_contig1508:9664..10018Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 9665..10018 +
1691682990.8822815-CDS-L-elsbetiae_contig1508:9664..100181691682990.8822815-CDS-L-elsbetiae_contig1508:9664..10018Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 9665..10018 +
1622815612.2804172-CDS-L-elsbetiae_contig1508:10509..106541622815612.2804172-CDS-L-elsbetiae_contig1508:10509..10654Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 10510..10654 +
1691682990.8957298-CDS-L-elsbetiae_contig1508:10509..106541691682990.8957298-CDS-L-elsbetiae_contig1508:10509..10654Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 10510..10654 +
1622815612.2909684-CDS-L-elsbetiae_contig1508:10957..111271622815612.2909684-CDS-L-elsbetiae_contig1508:10957..11127Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 10958..11127 +
1691682990.904856-CDS-L-elsbetiae_contig1508:10957..111271691682990.904856-CDS-L-elsbetiae_contig1508:10957..11127Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 10958..11127 +
1622815612.3012645-CDS-L-elsbetiae_contig1508:11504..117601622815612.3012645-CDS-L-elsbetiae_contig1508:11504..11760Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 11505..11760 +
1691682990.9130807-CDS-L-elsbetiae_contig1508:11504..117601691682990.9130807-CDS-L-elsbetiae_contig1508:11504..11760Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1508 11505..11760 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1508.3640.1

>prot_L-elsbetiae_contig1508.3640.1 ID=prot_L-elsbetiae_contig1508.3640.1|Name=mRNA_L-elsbetiae_contig1508.3640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=614bp
MEAGSGTAVVMPPSPEAAVGSSSGLPAKTFGGTHHVAGEAVPPAPASEEG
SPSPCLPPSPAAAAAAVDGSVSPPADTSGKEDAAEGPLEQLSDETNAALV
KQVEFYFSDENLPTDAFMKKKLKAGGVQGWVPLKVICNFPKVKKLSKDIR
AIAAALEGSSSLVVSKATRVRRKTPYKFPDKDGMSDVTARTVVAVNIPAE
STVESLTPFFSACGVAEAIRVVHKSKNDGSKNSEIQAPVGPNRDLYATCQ
FSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAAANKKAR
QEQKDRTTNSRPPAERVEPGGGNVRDGQMRSRSLTELELENAAGGGGGSG
GGGGRGGTRMSPPHHTRASREDGGSSGDGDGGEETPAATRRKPRSVSNAD
ALYSGSGGCAGGGVENGSPPRHAMGGAGDRLPRKGVVQTLSSEGWSWIKK
DGTGSRKSGNRVPFAMADVVMKDGEQQPLQKGDHVEYRAWKDSEGRLMAV
RVERVKERPRPAGGGGGGGGNRAAQAHFRMAAGPEEGKSGFAAGRGRPIV
VAPSPAGGGVGGTAGNDVLRRPRGSSMGGVDSKVFVPSSPPVAVVVVPAE
VPVPSPQQFEDAD*
back to top

mRNA from alignment at L-elsbetiae_contig1508:2900..11953+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1508.3640.1 ID=mRNA_L-elsbetiae_contig1508.3640.1|Name=mRNA_L-elsbetiae_contig1508.3640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9054bp|location=Sequence derived from alignment at L-elsbetiae_contig1508:2900..11953+ (Laminarionema elsbetiae ELsaHSoW15)
GCTGTTTGCTTTCCTTCGCCGTTTGGTTCCCCCATAACGGTCGGCCCTCT
CTCTGACGCGATGGAGGCGGGATCTGGGACCGCCGTTGTCATGCCCCCCT
CTCCGGAGGCCGCAGTTGGATCGTCGTCGGGCCTTCCTGCGAAGACGTTT
GGCGGCACGTGAGTACTTCAGAAACGGTAGCGGGGAGAACCAACACGACA
TATATACGTCGTGGATGTGTTGTCTCCCTCCTTTGACACAAACAGAGGTC
CCACACAATATTGTGTGTGTTGTTTAATTTAAGCCACTACGCCGTGATTT
CCACCACGGACGTAGGCTTGTTGGTACTAGTTTTTTACCCCGGACACGTC
GACGAACACCGACCGTAAAATCAACGGATCAACCAATGGGAGCTTCGTTG
GAAGACGGTATATACATCCTCCGTGAGAAGCAGGCGACGCATACACCAAC
GAGGGAGATGTGTTAGGATAGAGAGTGTTTATCTCTAGACAAGGAATGCT
AGGTTTTGAAACGAAAGGACTAGATAGAAGGTGTGAAATGCCTGTTTTGG
GGGTCCTTCCTTTGCGTGCACAGCGCGACATGTACATATTCCGGGGAGAC
CAACAACCCCTGATGTGTCGTGTTGATGTTGTCAGGTATTTGCTTCCCAG
TTCCACCCAAAAGATCATTTTCCGCCCAGGAGTGTCACCAGTAGTCCGTC
CTGCTTCTTCGTTTTCACGTCTGTTGTTCTTTGTCCCCATCCTCCCATGT
ATGTATGATATCCTATGAACATTCACGTGTTCGACTGCTGACAGCCGGTT
TGCTCGCTGCCGTCTCGGCCTCCGCGCCCCCCCCCCTCCCCTCTTTCGAC
AGCCACCACGTGGCTGGGGAGGCCGTTCCTCCTGCGCCGGCCTCCGAGGA
GGGCTCTCCGTCTCCGTGTCTGCCGCCCTCGCCGGCGGCGGCGGCGGCGG
CCGTCGATGGCTCGGTGTCCCCGCCGGCTGACACGAGCGGAAAAGAGGAC
GCGGCCGAAGGTAGGGGTCGGTCGTGTTTTTGAGCCGCGCCGCGGTACAC
GTGCCGTCGTGTTTTCTCCGCTTGCGGCGCGCGCCCAAATAGTTGTTGTG
GGGTGAGGCTGGCTGGGAGAACTATTTCCCCGAAGTTGAGGCGCGCGCGT
GGGTGTTCGGTTATCGGGGTTTGCTGTGCCGAGCGATCGCCCACCCGGTT
TTTGGGCAGCTGCTTGTCGCCGTTGGTTCGATTAGTTAAGATGGACCGCG
CGCGCTTGCCCCAGCTTTGAAATTCCGGGTAGAGATTCCAGGAGAGAGCC
CGAAGCCACACTTGATTTTTTGATACTGGTGTTGTTTGGCCGTCTCCCAC
AGAAAAATGCCGTAGATCTCTCTCCGGCTGCCCTCTCCCACCGCAAAATC
GACTTTTTGCTCTTTGAAACATTGAAGCGATACCAAAATGCCTCCAGTCA
ATCCTTGGGGTTGGCTGTCTTGAGGTAGCTCTTCCTGTTGGTAATAGAGC
GAGAGCAGTATGTACAGCAGTGGACCGATTCCAAGTGTGCACCGAGCAAA
CTTCTTTTTCGTATTTCGGTAAAAGCGAGGGCATGCACACTTGGGATAAG
ACAGCAGCGAGGGTCGGCCATGGAGCACTCGGGGTCTATGGAGACGGGAT
CTTCGGCTGAACATCTCTTCTAAAACCCTTGGCAGAACTCAGAAGGACAT
AGTCGGAGCACAGCAGGAGCGGTGCACAGCAGCTTTCGATCGGGAGAATT
TGGCGTTTTCAACCTGTCTCAAACCGCCCGATTTTCTGTCAACCTGGCCG
GGTTAGCTGAACGAACAAAGGCACACACGCCCTGTGCGAACCAGTCAAAA
CATCAGTCAAAACATCAGACCCGCGAAGATAGTCAGGATGCTCCCCTTGA
AGAAAAGGGGACTTACGACAGCCGAACGGACTCCGATCCCCATAGAAATT
GCGGTGCCAAACACGTGTTCCCCTGTACTGATTTCAAACAAGAAGAACTC
AGAACCAGCAGTCTATTCCGGGCAACTTCAAGTACGTTGTCCACCCTTAC
GCTCTTAAAGTTTCGCCAGAATATACCAAAGCGACCAGTCGCTCAGCGCA
GGTTGCGTGCTGCATACACCGCACTACTTTCAGTACACCACAAGGCGACA
GCAGGGTTGTCAAAAGTAAAAGTTCCACGGGAGACGCTCGAAGCGCAAAT
AGCACAGCAGTAAACGCCCGAACATGCGGAAGGAAAGGGGTGTTTCAAAT
TTGCTCAAATTTGCTCATCATCCTTACGCTTCAGAAGCTTCCGCAAAAAC
GCTCAAAATGCTGCCTCGCGCGGGCCGATTCCCAGTGTAAGCACGCGTAG
AAGCCTTCAGAGACAACTAGTAGCAGTCGTCTAACCCACCTGTAAACCCT
TGTACATAACACAACCTATACGGGAAAGGGGGGGGCGAAATACTCCGAAC
CGTTTCATTTTCCTCTTCCACGTGTTTGTTGTTGTTGTTGTTGTTGTTCG
CGTGCCTCGGCGGCGGCGGCGACAGGGCCCCTGGAGCAACTGTCGGACGA
GACAAACGCGGCCCTGGTGAAGCAGGTGGAGTTCTACTTCAGCGACGAGA
ACCTCCCGACGGATGCCTTCATGAAGAAGAAACTCAAGGCCGGCGGGGTC
CAAGGTATGTATCGCATATATCGTCCGTACAGTTCGGCACGCTAACCACA
AGGCGGGGCTGTAGAGCTGTGGAACCGGTGCATGTGTATGTACATAGTAC
GGTGGGGCGGCAGGTATCTACACCACAAGATGAGCCTGTTTTTATTTTAT
TTTTTTGCTATTTTGTTGTTGTTGTCTTCGCTCTGTGTGCTGCTTCAGTC
AAGACTCCCCCCATGTATTTGCCGTGCGTGCGTGCATAGACTGCTTTCGC
GGCCTAATATGTAGCGGAAACACCCGACGAAAATGAGGGGGTCCAAAGAA
GGGCGGGGGCCTCTGTGAAACAACGGTGGATAACTTTGGTGCCGATGCTT
TTGTTGGTGGATGATGATTCAGGCTGGGTGCCGCTGAAGGTTATCTGCAA
CTTCCCGAAGGTTAAGAAGCTGTCGAAGGACATCCGCGCGATCGCCGCAG
CCCTGGAGGGGTCTAGCTCGCTCGTCGTGTCGAAAGCGACCCGCGTGCGG
CGCAAGGTGTGTGGTGTGTGCCGCGTTTTTATGTCGCTGTTGCAGTGCCT
GTGGAGTTGAGGCGAGAGCTGCGATACGATATGATTATTCTGTTAAAGTG
GTACCTATTAGACTGTGCGCAGTACACCTAACATGTCACTTGTTCCTTTT
TCCCCGAGAAGAACTTGGCTATTTGTTTTTTCTTCTAGACTGGGATCCGA
GAGATCCGAGAGCAAGTTCACAAATTTAGAAACAGCTCACCGCTTCGGTC
CCCTCGTAGTGAAAGCAGTAGTGGTGTATATGTTTTTTCTTTCTACCCGT
GTTCTGTGTGAACCCTGGGCGCAAGTACAGTGATAGCTAGCTCCCTTGCT
AGTGTTTTGGAAGGCTCAACGAGAGACACAGGACCTTTTGCTTTTTTTTT
GTTGCGGAAGAGCACGCACACCGCTCACCTGCAAAGTCGAGTACGTGTGG
AAGGCGCGTGCACACCCACCCGACCTGGAGTTTGCAACAGACTGGAGCAA
AGCGCGAAGTGAAATCTTTATGCCCCCCCCCCCCTTGAACCTGCGGTGCC
TCGCCTCTTTATTTGTCCCTCCTGCAGACGCCGTACAAGTTCCCCGACAA
GGACGGCATGTCTGACGTCACCGCCCGGACAGTCGTGGTGAGAGAACAAA
CATAGACGACGCCAACAAAGGAGAGCAAATCGACGGCTGTGTCTTGACCA
CTCTCGCTCAGTTTATGTGTCTGCAGCACACGTGAGTGTGTCCTATCCCT
CTCTCCAGGCGAGACGGAGGTCCGGACAGCGTGGGAAGCTCTCGTCGTAG
ACCATGACCACACATAAAAGAGTGGACTTTAGTCGCGAAAGGCTTCAGAA
AGGTCACGTTCAACGAGCGACTGGGCAGCGGTTCTTTTTTAGCAAGGGAC
ACGGCAGGGCGTTGTAAGACGGGGGTTTCAGCTCGATCAGACCGTACATC
CGTTCGCTAATCACATAAGTAGCCGACAAGATGTTGATACACAGCCTCTG
CCCGAGGCCGTTTTGCTGCCCCGAGAACGGCTTGGGACACCACTTCCCGC
CCAATCTGCATTCGCAGCGGTTGAGCCCCACGTTTCCCAGCGTTGGAAGC
CTCACGTTTCCCTTTTCCCCTCCCCCCCTCCTGCCCTGTCGCCCTTTCCA
TCCTGGCTTGCATGTGGCGTACCCTGCATCTCGCTTGCTCGCGCGTGGCG
TGCGGCCCGCGCTCCAAATATACCGTTGGGGAAAAACCCTATCCAAAAAA
AAAAAAAATGCAGGCGGTGAATATCCCGGCTGAGTCGACGGTGGAGTCAC
TGACACCGTTTTTCTCAGCCTGCGGGGTGGCGGAGGCTATTCGCGTGGTC
CACAAGAGCAAGAACGATGGCAGCAAGTGAGTGGAGCGGCAGAGCAAAGC
AGCAGGAGAGCAGACACGCGGTCGCAGCGAGCGCCGCGGCCGTCAACCGT
TCTCCGCCGCCACCTGAGTGATCTCTCTTCCCATATCCTCGTCTTGGGTT
TTTTATTTTATTGTTTAAGGTGTTTCTCATAATGCAGGAGTAAATTAGCA
CAGGCGTCGGGCTTGCCTCCGATCGAATGTTGCGTGTGCACGCTTGTGTG
CAATATTTTTTTTTCGTTCTCTGGTTGTGTTGTGTTGTGCGAATATGGAT
GCCTTGCTCAGGCTCGCCGGCTTCCCTCGCTGGCGGGCTTGTGCTCTGCT
GGTGCTGTTGGCGTTGAGCTAAAGACCACGAAAGCCACAGCGCGCACTCT
AGTGACTTCGTCGTGTTGTTGGCCTTGAGCTAAAGGCAACGAAAGCCGCA
GCGCGCGCTCGCTCCTAGTGACTTCGTCGTGTTGTTGACCTTGAGCTAAA
GGTAACGAAAGCCGCAGCGCGCGCTCGCTCCTAGTGACTTCGTCGTGTTG
TTGACCTTGAGCTAAAGGCCTCGAAAGCCGCAGCGCGCGCTCTGGTAGCT
TCGTCGGTCGCATGAAGCACACTTCCTGGCGAAGACAGGGTGCCTGGTAT
TTCGTTCGGCGTTTCCCCCTCTCCCGGCTTGCCTGGAAAACCGGTGGCGG
ACACATAATACTGTACCCTCTTCATCGACCTGATCGCTTTTGATGATAGA
TCTGGATCTTTGAGCTAAAAAAATCAGTGGACGGATCTATCTATGTATGC
ACCCCCTCACCACCCGCTTCGCTTTATCGCTACAGGAACTCGGAAATACA
GGCGCCCGTCGGACCGAACCGGGATTTATACGCTACCTGTCAGTTCTCCA
CGCTTGAAGAAGCCATCAGGGTGAGTTATGCTTTGTTTTGTATGTCCGCC
GATGAGGTAAAAAAGCTGGATGTTTGTCGGTTACCCCTGTGTCTTCCCCA
GGCACAGCAGTCGTACTACTGCTACTGTTGTCGTTTCGATTCTTTTGGCG
GCACGCGCGTCTCGTGTCATGCTTTTTGGGCACATGGAGGACTCAACGCG
GGTCTCCTTGTGGCGAACCGTGCAACGTGAGTGTGTTCACTCGACTGCTG
CTGCTGCTGCTGCCGTGCAGACCATCAAGAGAGACGATGATAATCTATCC
TCAGAGATTGCCGTATTATAGAAGTGTTTATATGACGCGCCTTATCAGAG
GTGCAACAGTCAGCAGTGGCGTATTTTCTTGCCAGACGTACCCGACTCGG
TTTCACCCAGTCGTGGTCTGATTTTCCTTCCGAAGTCACTTCTTTTCCCG
TAACTTGGCACTTGTGCGGCCCATCCGCGAGACGGCTTCGTTTCCCTGGT
CACGCACGGGCTGAGAAAACTTAATTTCGACTCGGATTAGTTCTACGTAA
CACACATATTTGCATACACACGCAAACCCGGTATATGCCGTCTCGTCTTG
AGAACGTCACAAGCCATGCCAAATCCACTTACCTGGTGCCAACAGCCCCA
TCCATGCTCAAACCCTTTATTGGTTCCCCCCTCGCCTTCTTCTTCTATGT
TGTATGCACCCCTCGCCAGGCTGTCAACGAACTCACTGACAGAAAGAGCT
GGCGGGGGGGGTTGCGCGTGTCTCTCGCCAATGGCGTTACGGTAGAGAAG
GCCCTGGCAAAGCTTAAGGCGGCGGCCAACAAAAAGGCCAGGCAGGAGCA
GAAGGACAGGTGAGCGGCCGGGACTCAGTGCACGCACCCACGCTCGCGCA
GAAAAAGAGAGATCGGGAGCAAGCGGGCGGGAAAACAGTCTGTTGCATGA
GTTTTTTTTTTTGCGTGAGTGGGGGTAGGAGTTGGGACAGGCGGCGAGGA
AGAGAGAGAGAGAAGAGGATGAGAGGGGACAAATCATGATTTCTTGCTTT
TTTTTCCAAGGGCGCAATCGCGCAGTGTGTAGGTGTTGTTCGGCATGGCA
GCAGCATCCCGAGGAGGTGCCTGGCTTTCGTGTCGACCGCTTCCCGCGCC
TGCATACTTCACACATGTACGCGCCGTTTCCCGACAGGGAGTCGTTGCTT
CGGATCTTGTAAATTGATGGGGCAATCGTCTTCTCCGTTCGAGAGAGAGA
GAGAAAAAGAGAGTGTATTTTTGTGTCATCGATCGGAAGGAAGCTATCGA
AGTTTTTTGTCATGAAAACCTGTTGTTTTTGTTTGCGCGCGCACGCCTCG
CCGCCGCGCTCCCAGGACGACCAACTCGCGACCGCCCGCCGAGCGCGTCG
AACCCGGCGGCGGCAACGTTCGCGACGGGCAGATGCGCTCCCGATCCCTG
ACGGAGCTGGAGCTTGAGAATGCCGCAGGCGGGGGCGGCGGCAGCGGCGG
CGGCGGTGGGAGAGGGGGGACGCGCATGTCGCCTCCTCACCACACCCGAG
CCTCGAGAGAGGACGGGGGCAGCAGCGGGGACGGGGACGGGGGGGAAGAG
ACGCCGGCGGCGACAAGGCGCAAGCCGCGGTCCGTGTCGAATGCGGACGC
TCTGTACAGCGGGAGCGGCGGCTGTGCGGGCGGAGGGGTCGAGAACGGAT
CTCCCCCCCGACACGCCATGTGAGAGTCTTCGGCCTGGAGTTTTTGTCCC
AGCGTCCAGGAGGAAGGCGATGGGGATGACTGATTCTCCTGGTGTAGGCC
CGAGCGTCCCAGCGCCGATGCGTGGAGCTCATGAGTGGGCATTCCGTTTG
ACGCTTCTGTCTCGAGAAGGGAGGAATCGGTGTTTTGGGGGGGAGTGTCT
TGTCAGACCCAGACCCAGACCCCCCCCCCGTTGGGATACAGGGAAATGAA
TGTTTTCATGCGGACAACAAGTGTTCGTCTCTTGTCCAAGCTGGCTGGCT
CATCAGTTGGTGTTTTGGGAGCGAGACCCCCACTTCCTCGCCGTGGGCGT
GACGTGACGGCATATGTACTGTGTGCGTGGCGCCCCCAACCGTCCTCACA
ATGTTTCATGTTTTTCCCTCCTCGCCCTTCTTTTCTTGTGTCCCCCTTCC
TCCTGCTTGTCTTGGTCTTCCCCTCTATCCTTCGTCGGTCTTGCCTCTCC
CGCTTGCAAGGGGTGGCGCTGGCGACAGGCTGCCGCGGAAGGGCGTGGTG
CAGACGCTGTCGTCGGAGGGGTGGTCGTGGATCAAGAAGGACGGCACCGG
CTCCCGAAAGAGTGGCAACCGCGTGCCCTTCGCGATGGCAGACGTGGTGA
TGAAGGTGGGATCTCTCTCCGGTTTGCTCGGCTTGGCTCGGCCGGTCCGG
CTGTCGTTTGCTGCGTTGGAATGCCTAGATATGCCCTGTATTACCGCCCG
TCGGGGGTTGTTTCTTCGTTTCTTCCCCTCGATATCGCCAAGCACAATTT
CCGCATGATGGAGTTGAAGCCACCTGCCCGCTGCTTCCACCCCCCGCCCA
CGACACTCCTCTTCGTTCGCAGCGGAGGTGCTGCTACATGCAATGGTCAT
TCATGTCTGCGACAAGTTTTTTTTTTTTCTGAAACCATCCAACCGAACAA
TCCTCCAGGACGGAGAGCAGCAGCCGTTGCAGAAGGGCGACCACGTGGAG
TACCGCGCCTGGAAAGACAGCGAGGGCAGATTGATGGCCGTGCGGGTCGA
GCGCGTCAAGGAGAGACCGCGACCAGCGGGAGGCGGCGGCGGCGGCGGCG
GCAACCGGGCCGCCCAGGCGCACTTTCGGTGAGAGAGGCATGGTTCGGGG
ATGGCGTGTGGGCAAATGGCGGTATGTAAGGGCCACAATAAAGAGACCTA
TTTATCTTCCTGTTTGGCTGGATATAGTCCCTCACGTCCCTTGTTGTTTC
TCACAGGCGGCAGGGCCTGCATCAGTACCCCCCAAGCCTCCTTTTTGTTT
TGCGTTAGTTGGCACCAGCTTGGCAGATCATTCGTACGGGAGTTCGGCAG
GCTCTCTTGGACTACTCACTACTGTGCTACTACTGTACGAAGAAGTCGAG
CCTTTGGGGTGGGGGCTCCGTGCGCTTCTCCTTGCCTCTGTCTCTCTCCG
TCACCCGAACTCCTTCTTCCTCTGCGCTGCTGCCCCCCCGCCTGAAATTG
TCCAGCATGGCCGCTGGACCCGAAGAGGGGAAAAGCGGCTTCGCGGCCGG
CAGAGGACGGCCCATCGTGGTGGCGCCCTCACCAGCTGGAGGCGGCGTAG
GCGGGACGGCTGGAAATGACGTCCTGCGGCGACCGCGCGGCTCTAGTATG
GGCGGGGTGGACAGTAAAGTATTTGTCCCGTCGTCGCCGCCGGTGGCGGT
GGTGGTGGTGCCGGCAGAGGTTCCGGTACCGTCGCCGCAGCAGTTTGAGG
ATGCAGATTGATCGAGGCGTTTCAGGGTACACTAGAAAGCGGTGGAAGAA
GAGCCGCTGGGTTCGATGAACTAAAGGTGGCCTTTGGGACTATACTCCCT
ATCTTTTAGGTTCTGAATCAGAGTGAACAAAAAGAAACAAGATATGATGC
GTGTTTGTAGGCTGAATTTAACTAAGATGACAAATGTAAAGGCGCTGGGC
GGGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1508:2900..11953+

>mRNA_L-elsbetiae_contig1508.3640.1 ID=mRNA_L-elsbetiae_contig1508.3640.1|Name=mRNA_L-elsbetiae_contig1508.3640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3684bp|location=Sequence derived from alignment at L-elsbetiae_contig1508:2900..11953+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGGCGGGATCTGGGACCGCCGTTGTCATGCCCCCCTCTCCGGAGGC
CGCAGTTGGATCGTCGTCGGGCCTTCCTGCGAAGACGTTTGGCGGCACAT
GGAGGCGGGATCTGGGACCGCCGTTGTCATGCCCCCCTCTCCGGAGGCCG
CAGTTGGATCGTCGTCGGGCCTTCCTGCGAAGACGTTTGGCGGCACCCAC
CACGTGGCTGGGGAGGCCGTTCCTCCTGCGCCGGCCTCCGAGGAGGGCTC
TCCGTCTCCGTGTCTGCCGCCCTCGCCGGCGGCGGCGGCGGCGGCCGTCG
ATGGCTCGGTGTCCCCGCCGGCTGACACGAGCGGAAAAGAGGACGCGGCC
GAAGCCACCACGTGGCTGGGGAGGCCGTTCCTCCTGCGCCGGCCTCCGAG
GAGGGCTCTCCGTCTCCGTGTCTGCCGCCCTCGCCGGCGGCGGCGGCGGC
GGCCGTCGATGGCTCGGTGTCCCCGCCGGCTGACACGAGCGGAAAAGAGG
ACGCGGCCGAAGGGCCCCTGGAGCAACTGTCGGACGAGACAAACGCGGCC
CTGGTGAAGCAGGTGGAGTTCTACTTCAGCGACGAGAACCTCCCGACGGA
TGCCTTCATGAAGAAGAAACTCAAGGCCGGCGGGGTCCAAGGGCCCCTGG
AGCAACTGTCGGACGAGACAAACGCGGCCCTGGTGAAGCAGGTGGAGTTC
TACTTCAGCGACGAGAACCTCCCGACGGATGCCTTCATGAAGAAGAAACT
CAAGGCCGGCGGGGTCCAAGGCTGGGTGCCGCTGAAGGTTATCTGCAACT
TCCCGAAGGTTAAGAAGCTGTCGAAGGACATCCGCGCGATCGCCGCAGCC
CTGGAGGGGTCTAGCTCGCTCGTCGTGTCGAAAGCGACCCGCGTGCGGCG
CAAGGCTGGGTGCCGCTGAAGGTTATCTGCAACTTCCCGAAGGTTAAGAA
GCTGTCGAAGGACATCCGCGCGATCGCCGCAGCCCTGGAGGGGTCTAGCT
CGCTCGTCGTGTCGAAAGCGACCCGCGTGCGGCGCAAGACGCCGTACAAG
TTCCCCGACAAGGACGGCATGTCTGACGTCACCGCCCGGACAGTCGTGAC
GCCGTACAAGTTCCCCGACAAGGACGGCATGTCTGACGTCACCGCCCGGA
CAGTCGTGGCGGTGAATATCCCGGCTGAGTCGACGGTGGAGTCACTGACA
CCGTTTTTCTCAGCCTGCGGGGTGGCGGAGGCTATTCGCGTGGTCCACAA
GAGCAAGAACGATGGCAGCAAGCGGTGAATATCCCGGCTGAGTCGACGGT
GGAGTCACTGACACCGTTTTTCTCAGCCTGCGGGGTGGCGGAGGCTATTC
GCGTGGTCCACAAGAGCAAGAACGATGGCAGCAAGAACTCGGAAATACAG
GCGCCCGTCGGACCGAACCGGGATTTATACGCTACCTGTCAGTTCTCCAC
GCTTGAAGAAGCCATCAGGGAACTCGGAAATACAGGCGCCCGTCGGACCG
AACCGGGATTTATACGCTACCTGTCAGTTCTCCACGCTTGAAGAAGCCAT
CAGGGCTGTCAACGAACTCACTGACAGAAAGAGCTGGCGGGGGGGGTTGC
GCGTGTCTCTCGCCAATGGCGTTACGGTAGAGAAGGCCCTGGCAAAGCTT
AAGGCGGCGGCCAACAAAAAGGCCAGGCAGGAGCAGAAGGACAGGCTGTC
AACGAACTCACTGACAGAAAGAGCTGGCGGGGGGGGTTGCGCGTGTCTCT
CGCCAATGGCGTTACGGTAGAGAAGGCCCTGGCAAAGCTTAAGGCGGCGG
CCAACAAAAAGGCCAGGCAGGAGCAGAAGGACAGGACGACCAACTCGCGA
CCGCCCGCCGAGCGCGTCGAACCCGGCGGCGGCAACGTTCGCGACGGGCA
GATGCGCTCCCGATCCCTGACGGAGCTGGAGCTTGAGAATGCCGCAGGCG
GGGGCGGCGGCAGCGGCGGCGGCGGTGGGAGAGGGGGGACGCGCATGTCG
CCTCCTCACCACACCCGAGCCTCGAGAGAGGACGGGGGCAGCAGCGGGGA
CGGGGACGGGGGGGAAGAGACGCCGGCGGCGACAAGGCGCAAGCCGCGGT
CCGTGTCGAATGCGGACGCTCTGTACAGCGGGAGCGGCGGCTGTGCGGGC
GGAGGGGTCGAGAACGGATCTCCCCCCCGACACGCCATGACGACCAACTC
GCGACCGCCCGCCGAGCGCGTCGAACCCGGCGGCGGCAACGTTCGCGACG
GGCAGATGCGCTCCCGATCCCTGACGGAGCTGGAGCTTGAGAATGCCGCA
GGCGGGGGCGGCGGCAGCGGCGGCGGCGGTGGGAGAGGGGGGACGCGCAT
GTCGCCTCCTCACCACACCCGAGCCTCGAGAGAGGACGGGGGCAGCAGCG
GGGACGGGGACGGGGGGGAAGAGACGCCGGCGGCGACAAGGCGCAAGCCG
CGGTCCGTGTCGAATGCGGACGCTCTGTACAGCGGGAGCGGCGGCTGTGC
GGGCGGAGGGGTCGAGAACGGATCTCCCCCCCGACACGCCATGGGTGGCG
CTGGCGACAGGCTGCCGCGGAAGGGCGTGGTGCAGACGCTGTCGTCGGAG
GGGTGGTCGTGGATCAAGAAGGACGGCACCGGCTCCCGAAAGAGTGGCAA
CCGCGTGCCCTTCGCGATGGCAGACGTGGTGATGAAGGGGTGGCGCTGGC
GACAGGCTGCCGCGGAAGGGCGTGGTGCAGACGCTGTCGTCGGAGGGGTG
GTCGTGGATCAAGAAGGACGGCACCGGCTCCCGAAAGAGTGGCAACCGCG
TGCCCTTCGCGATGGCAGACGTGGTGATGAAGGACGGAGAGCAGCAGCCG
TTGCAGAAGGGCGACCACGTGGAGTACCGCGCCTGGAAAGACAGCGAGGG
CAGATTGATGGCCGTGCGGGTCGAGCGCGTCAAGGAGAGACCGCGACCAG
CGGGAGGCGGCGGCGGCGGCGGCGGCAACCGGGCCGCCCAGGCGCACTTT
CGGACGGAGAGCAGCAGCCGTTGCAGAAGGGCGACCACGTGGAGTACCGC
GCCTGGAAAGACAGCGAGGGCAGATTGATGGCCGTGCGGGTCGAGCGCGT
CAAGGAGAGACCGCGACCAGCGGGAGGCGGCGGCGGCGGCGGCGGCAACC
GGGCCGCCCAGGCGCACTTTCGCATGGCCGCTGGACCCGAAGAGGGGAAA
AGCGGCTTCGCGGCCGGCAGAGGACGGCCCATCGTGGTGGCGCCCTCACC
AGCTGGAGGCGGCGTAGGCGGGACGGCTGGAAATGACGTCCTGCGGCGAC
CGCGCGGCTCTAGTATGGGCGGGGTGGACAGTAAAGTATTTGTCCCGTCG
TCGCCGCCGGTGGCGGTGGTGGTGGTGCCGGCAGAGGTTCCGGTACCGTC
GCCGCAGCAGTTTGAGGATGCAGATTGACATGGCCGCTGGACCCGAAGAG
GGGAAAAGCGGCTTCGCGGCCGGCAGAGGACGGCCCATCGTGGTGGCGCC
CTCACCAGCTGGAGGCGGCGTAGGCGGGACGGCTGGAAATGACGTCCTGC
GGCGACCGCGCGGCTCTAGTATGGGCGGGGTGGACAGTAAAGTATTTGTC
CCGTCGTCGCCGCCGGTGGCGGTGGTGGTGGTGCCGGCAGAGGTTCCGGT
ACCGTCGCCGCAGCAGTTTGAGGATGCAGATTGA
back to top