mRNA_L-elsbetiae_contig10320.363.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10320.363.1
Unique NamemRNA_L-elsbetiae_contig10320.363.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Match: D7G4V1_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V1_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 7.530e-143
Identity = 228/309 (73.79%), Postives = 247/309 (79.94%), Query Frame = 1 
Query:   76 FMKHATVL--VAALLLPQNSSAFVLQCSGRYATA-----AATMRHSTRSAAGEGGAATGRGEFLSGAAAATAAVLGIASSGVAGMAP-AGALVKGNAPPPGYNKKRGSGYGNXXXXXXXXXGANAEDGDPSRTFSVTKTGNRFKDIKIGDGPEVKAGGVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVSAVDEGVVGMRVGGVRRVAVRPERGWKKQDPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEPKPVGYGATRRMARRFDETLIVEVEVVDTRENNGRIF 978
            F + A VL  VA LLLP ++ AFVL C+    +         M  +     GEGG+ T RG+FLSGAA   AAVLG++++G  G  P A ALVKGNAPPPGYNKKRGSGYGN          A  ED DPSRTFSVT +G RFKD+KIG GPEVK   VVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLG+GRL+SAVDEGVVGMRVGGVRRVAVRPERGWKKQDPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEP+PVGYGATRRMARRFDETLIVEVE+V  +E NGRIF
Sbjct:    3 FNEQAKVLLMVANLLLPWSTRAFVLHCNANQRSVLGRHEGVVMMETLHGNGGEGGS-TNRGDFLSGAAVTAAAVLGVSAAGTVGAPPPASALVKGNAPPPGYNKKRGSGYGNGEPEATPTADAGPEDSDPSRTFSVTSSGIRFKDLKIGVGPEVKPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGSGRLISAVDEGVVGMRVGGVRRVAVRPERGWKKQDPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAKEGNGRIF 310
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BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Match: A0A835YV71_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV71_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.920e-74
Identity = 130/236 (55.08%), Postives = 155/236 (65.68%), Query Frame = 1 
Query:  313 PAGALVKGNAPPPGYNKKRGSGYGNXXXXXXXXXGANAEDGDPSR-------------------TFSVTKTGNRFKDIKIGDGPEVKAGGVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVSAVDEGVVGMRVGGVRRVAVRPERG--WKKQDPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEPKPVGYGATRRMARRFDETLIVEVEVVDTR 957
            PA ALVKGNAPP    + R                + A+D    R                    F VT+ G R+KDI +G G +V  G  VD+RYRV KLGKRSY+G+SGE   VFSLGYGEDDDKEG V+TVP+G G+L++AVDE +VGM++GG RRV VRP+RG  WKK DP CA  ID+G+ SG+PGA +AKVEDCID TLEP+PV YGA RRMARRFDE LIVE+E V  R
Sbjct:   28 PASALVKGNAPPTAEERARKRAEAAEREKSRSI--SEAKDAGEKREVEMRSKYETEETALGSDTAFKVTQNGVRYKDIALGAGAQVNKGSTVDLRYRVMKLGKRSYNGLSGEATMVFSLGYGEDDDKEGSVVTVPVGKGKLITAVDEAIVGMKLGGKRRVLVRPDRGQGWKKDDPNCAALIDVGIASGIPGATIAKVEDCIDETLEPRPVSYGAKRRMARRFDEALIVEIEPVAVR 261
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BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Match: A0A6H5JW52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW52_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 5.690e-60
Identity = 103/125 (82.40%), Postives = 106/125 (84.80%), Query Frame = 1 
Query:  322 ALVKGNAPPPGYNKKRGSGYGNXXXXXXXXXGANAEDGDPSRTFSVTKTGNRFKDIKIGDGPEVKAGGVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVSAVDE 696
            ALVKGNAPPPGYNKKRGSGYGN          A  ED DPSRTFSVT +G RFKD+KIGDG EVK   VVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLG+GRLVSAVDE
Sbjct:   92 ALVKGNAPPPGYNKKRGSGYGNGEPEATPTADAGPEDSDPSRTFSVTSSGIRFKDLKIGDGAEVKPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGSGRLVSAVDE 216
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BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Match: A0A7S2XW09_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW09_9STRA)

HSP 1 Score: 188 bits (477), Expect = 4.540e-55
Identity = 105/220 (47.73%), Postives = 141/220 (64.09%), Query Frame = 1 
Query:  313 PAGALVKGNAPPPGYNK------KRGSGYGNXXXXXXXXXGA-NAEDGDPSRTFSVTKTGNRFKDIKIGDGPEVKAGGVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVSAVDEGVVGMRVGGVRRVAVRPERGWKKQDPK-CATEIDMGVMSGVPGAALAKVEDCIDLTLEPKPVGYGATRRMARRFDETLIVEVEVV 948
            P  ALVKG+APP GY K      K G+             G+  A +G+     S T +G RFKD+ +G G EV +   V +RYR+ + GKRSYDGISGE   +F LGYGEDDDK GD L V +G+G++V A+++G++G + GGVRRV VRP+ GW+K D + CA ++D+G    VPGA +   E C+DL L P P  + A R++ARRFDE+LI E+EVV
Sbjct:    8 PTNALVKGSAPPEGYGKIKSQAPKEGASLDKSAEPSTIAEGSMEAAEGE----LSFTPSGVRFKDMVLGSGQEVGSDSKVSLRYRILRSGKRSYDGISGEGSLIFGLGYGEDDDKVGDTLKVGMGSGKMVKALEDGLIGAKAGGVRRVLVRPDMGWQKSDLEACAPKLDLGATGTVPGA-ITYTEGCMDLDLLPSPRTFQAKRKLARRFDESLIAEIEVV 222
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BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Match: L1JF69_GUITC (PPIase FKBP-type domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JF69_GUITC)

HSP 1 Score: 188 bits (477), Expect = 4.980e-55
Identity = 99/221 (44.80%), Postives = 138/221 (62.44%), Query Frame = 1 
Query:  322 ALVKGNAPPPGYNKKR------------GSGYGNXXXXXXXXXGANAEDGDPSRTFSVTKTGNRFKDIKIGDGPEVKAGGVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVSAVDEGVVGMRVGGVRRVAVRPERGWKKQDPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEPKPVGYGATRRMARRFDETLIVEVEVV 948
            ALVKG APPP + KK+               YG            + +DG+    FSVTK G+R++D++IG G EVK G  V+++YRV +LGKRS DG+SGE   VFS GYGEDDDKE D L   +G   L++A+   + GM+ GG+RR++V+PERGWK +D  C   +D+G   G+PG A+ + E C+D    P P  + A R+++RRFDE L++EVEV+
Sbjct:   12 ALVKGIAPPPDFGKKKDLPTKKITNIQEAQEYGAQREATLF----DKQDGN----FSVTKEGDRYRDVRIGTGAEVKPGSEVEIKYRVLRLGKRSRDGLSGEASLVFSYGYGEDDDKETDTLKFVVGEANLINALSSSLPGMKQGGLRRISVKPERGWKLEDASCVKSVDIGSAVGLPGGAVTEAETCLDYFRVPSPATFQAKRKLSRRFDENLLMEVEVI 224
[Close]
BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Match: A0A7S2XYV7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYV7_9STRA)

HSP 1 Score: 188 bits (477), Expect = 3.500e-54
Identity = 105/220 (47.73%), Postives = 141/220 (64.09%), Query Frame = 1 
Query:  313 PAGALVKGNAPPPGYNK------KRGSGYGNXXXXXXXXXGA-NAEDGDPSRTFSVTKTGNRFKDIKIGDGPEVKAGGVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVSAVDEGVVGMRVGGVRRVAVRPERGWKKQDPK-CATEIDMGVMSGVPGAALAKVEDCIDLTLEPKPVGYGATRRMARRFDETLIVEVEVV 948
            P  ALVKG+APP GY K      K G+             G+  A +G+     S T +G RFKD+ +G G EV +   V +RYR+ + GKRSYDGISGE   +F LGYGEDDDK GD L V +G+G++V A+++G++G + GGVRRV VRP+ GW+K D + CA ++D+G    VPGA +   E C+DL L P P  + A R++ARRFDE+LI E+EVV
Sbjct:   77 PTNALVKGSAPPEGYGKIKSQAPKEGASLDKSAEPSTIAEGSMEAAEGE----LSFTPSGVRFKDMVLGSGQEVGSDSKVSLRYRILRSGKRSYDGISGEGSLIFGLGYGEDDDKVGDTLKVGMGSGKMVKALEDGLIGAKAGGVRRVLVRPDMGWQKSDLEACAPKLDLGATGTVPGA-ITYTEGCMDLDLLPSPRTFQAKRKLARRFDESLIAEIEVV 291
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BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Match: A0A6U4XZ85_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4XZ85_HEMAN)

HSP 1 Score: 186 bits (473), Expect = 2.230e-53
Identity = 101/220 (45.91%), Postives = 140/220 (63.64%), Query Frame = 1 
Query:  322 ALVKGNAPPPGYNKKRGSGYG-----NXXXXXXXXXGANAEDGDPSRT-FSVTKTGNRFKDIKIGDGPEVKAGGVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVSAVDEGVVGMRVGGVRRVAVRPERGWKKQDP-KCATEIDMGVMSGVPGAALAKVEDCIDLTLEPKPVGYGATRRMARRFDETLIVEVEVVDTRE 960
            ALVKG APP GY K++    G     N            AE  +   T F  T +G+R++D+K+G G EV  G  VD++YRV +LGKRS DG+ GE   + S GYGEDDDKE D  T+ +G   LV A++E ++G++ GGVRRV+VRPERGW+  D  +C   ID+G + G+PGA++ + ++C+D    P P  + A R++ RRFDET++VEVEVV  RE
Sbjct:   88 ALVKGVAPPEGYGKRKEKAEGEKKITNKQDALEAGAKKEAEMFENQATDFEKTPSGDRYRDMKVGTGAEVVTGKEVDIKYRVLRLGKRSRDGLGGEASLIMSYGYGEDDDKETDFKTITVGQTPLVLALEESILGIKEGGVRRVSVRPERGWRLPDSSQCGAAIDVGTVLGLPGASVTEADNCLDTNRVPSPTTFQAKRKLGRRFDETVLVEVEVVAVRE 307
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BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Match: A0A7S1E5E0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E5E0_HEMAN)

HSP 1 Score: 179 bits (453), Expect = 1.590e-51
Identity = 85/171 (49.71%), Postives = 121/171 (70.76%), Query Frame = 1 
Query:  451 FSVTKTGNRFKDIKIGDGPEVKAGGVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVSAVDEGVVGMRVGGVRRVAVRPERGWKKQDP-KCATEIDMGVMSGVPGAALAKVEDCIDLTLEPKPVGYGATRRMARRFDETLIVEVEVVDTRE 960
            F  T +G+R++D+K+G G EV  G  VD++YRV +LGKRS DG+ GE   + S GYGEDDDKE D  T+ +G   LV A++E ++G++ GGVRRV+VRPERGW+  D  +C   ID+G + G+PGA++ + ++C+D    P P  + A R++ RRFDET++VEVEVV  RE
Sbjct:   47 FEKTPSGDRYRDMKVGTGAEVVTGKEVDIKYRVLRLGKRSRDGLGGEASLIMSYGYGEDDDKETDFKTITVGQTPLVLALEESILGIKEGGVRRVSVRPERGWRLPDSSQCGAAIDVGTVLGLPGASVTEADNCLDTNRVPSPTTFQAKRKLGRRFDETVLVEVEVVAVRE 217
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BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Match: A0A812IG78_9DINO (Peptidylprolyl isomerase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812IG78_9DINO)

HSP 1 Score: 177 bits (448), Expect = 1.370e-49
Identity = 108/228 (47.37%), Postives = 142/228 (62.28%), Query Frame = 1 
Query:  301 AGMAPAGALVKGNAPPPGYNKKRG--SGYGNXXXXXXXXXGANAEDGD----PSRTFSVTKTGNRFKDIKIGDGPE--VKAGGVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDV-LTVPLGAGRLVSAVDEGVVGMRVGGVRRVAVRPERG--WKKQDPKCATEID-MGVMSGVPGAALAKVEDCIDLTLEPKPVGYGATRRMARRFDETLIVEVEVV 948
            AG+A A ALVKG+ PP GY   +G                GA  E+        +TF VT +G R+KD+K+G+  +   K G  + +RYRV + GKRSYDG+SGE  ++FSLGYGE DD++ D  L  PLG GR V A+DEG+VGM VGG+RRV VRP+ G  WKK   KCA  I  +G ++G+P A   K   C+D +L P+P  + A RR  RRFDE+LIVE+E+V
Sbjct:   87 AGLASAQALVKGSTPPKGYGLGKGIKEAADCKSLAECEELGAKREEEKYGTKMEKTFKVTASGARWKDMKVGNEADGVAKVGDDLKLRYRVMRAGKRSYDGVSGEATTLFSLGYGEGDDEKKDATLNAPLGTGRFVKAIDEGLVGMSVGGIRRVQVRPDYGLGWKKPG-KCAEAIGAVGAIAGLPAAGAEKESACLDTSLLPQPEDWNAKRRFERRFDESLIVEMELV 313
[Close]
BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Match: I2CRD0_NANGC (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRD0_NANGC)

HSP 1 Score: 167 bits (424), Expect = 3.640e-46
Identity = 100/228 (43.86%), Postives = 129/228 (56.58%), Query Frame = 1 
Query:  313 PAGALVKGNAPPPGYNKKRGSGYGNXXXXXXXXXGANAE-------DGDPSRTFSVTKTGNRFKDIKIGDG-----PEVKAGGVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVSAVDEGVVGMRVGGVRRVAVRPERGW-KKQDPKCATEIDMGVMSG---VPGAALAKVEDCIDLTLEPKPVGYGATRRMARRFDETLIVEVEVV 948
            P+ ALVKGNAPP    KK G              G   E       + +       T  G+R++D  +        P +KAG    +RYR  +LGKRS DG+SGE  +VFS GYGEDDD++GD L V +G   L+ A++ G+VGMRVGG RR+ VRPERGW K +      + D+  ++    VPG  +   EDC+D+T  P P  Y A RRM RRFDE+LIVEVEVV
Sbjct:   77 PSLALVKGNAPPKDMRKKTGGKSTAANMDEAIEAGRKREQEMFLRQEEEGGSEIQRTPEGDRYRDTFLSSSSASSIPPLKAGDACAIRYRALRLGKRSRDGLSGEASTVFSYGYGEDDDRDGDALEVTIGKSNLIPALEAGLVGMRVGGKRRILVRPERGWFKGKGCGVLEDTDVNNLAAAFIVPGTKITDTEDCLDMTRIPSPTSYAAKRRMGRRFDESLIVEVEVV 304
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10320.363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4V1_ECTSI7.530e-14373.79Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A835YV71_9STRA1.920e-7455.08Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A6H5JW52_9PHAE5.690e-6082.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XW09_9STRA4.540e-5547.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
L1JF69_GUITC4.980e-5544.80PPIase FKBP-type domain-containing protein n=3 Tax... [more]
A0A7S2XYV7_9STRA3.500e-5447.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U4XZ85_HEMAN2.230e-5345.91Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1E5E0_HEMAN1.590e-5149.71Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A812IG78_9DINO1.370e-4947.37Peptidylprolyl isomerase n=4 Tax=Symbiodinium TaxI... [more]
I2CRD0_NANGC3.640e-4643.86Peptidylprolyl isomerase n=1 Tax=Nannochloropsis g... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10320contigL-elsbetiae_contig10320:516..6111 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score417.2
Seed ortholog evalue7.3e-114
Seed eggNOG ortholog2880.D7G4V1
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.histone peptidyl-prolyl isomerization
EggNOG OGsCOG0545@1,KOG0552@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionSecreted FKBP domain protein
Ec32 orthologEc-20_000240.1
Exons7
Model size982
Cds size981
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815260.6997101-CDS-L-elsbetiae_contig10320:515..6591622815260.6997101-CDS-L-elsbetiae_contig10320:515..659Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 516..659 -
1691682802.6109464-CDS-L-elsbetiae_contig10320:515..6591691682802.6109464-CDS-L-elsbetiae_contig10320:515..659Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 516..659 -
1622815260.713388-CDS-L-elsbetiae_contig10320:1899..20401622815260.713388-CDS-L-elsbetiae_contig10320:1899..2040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 1900..2040 -
1691682802.6213229-CDS-L-elsbetiae_contig10320:1899..20401691682802.6213229-CDS-L-elsbetiae_contig10320:1899..2040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 1900..2040 -
1622815260.7242725-CDS-L-elsbetiae_contig10320:2570..26751622815260.7242725-CDS-L-elsbetiae_contig10320:2570..2675Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 2571..2675 -
1691682802.6355152-CDS-L-elsbetiae_contig10320:2570..26751691682802.6355152-CDS-L-elsbetiae_contig10320:2570..2675Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 2571..2675 -
1622815260.7341735-CDS-L-elsbetiae_contig10320:3183..32641622815260.7341735-CDS-L-elsbetiae_contig10320:3183..3264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 3184..3264 -
1691682802.6473198-CDS-L-elsbetiae_contig10320:3183..32641691682802.6473198-CDS-L-elsbetiae_contig10320:3183..3264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 3184..3264 -
1622815260.7464461-CDS-L-elsbetiae_contig10320:3801..39141622815260.7464461-CDS-L-elsbetiae_contig10320:3801..3914Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 3802..3914 -
1691682802.6577814-CDS-L-elsbetiae_contig10320:3801..39141691682802.6577814-CDS-L-elsbetiae_contig10320:3801..3914Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 3802..3914 -
1622815260.7558594-CDS-L-elsbetiae_contig10320:4293..44821622815260.7558594-CDS-L-elsbetiae_contig10320:4293..4482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 4294..4482 -
1691682802.667989-CDS-L-elsbetiae_contig10320:4293..44821691682802.667989-CDS-L-elsbetiae_contig10320:4293..4482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 4294..4482 -
1622815260.7651598-CDS-L-elsbetiae_contig10320:5903..61111622815260.7651598-CDS-L-elsbetiae_contig10320:5903..6111Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 5904..6111 -
1691682802.6790442-CDS-L-elsbetiae_contig10320:5903..61111691682802.6790442-CDS-L-elsbetiae_contig10320:5903..6111Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10320 5904..6111 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10320.363.1prot_L-elsbetiae_contig10320.363.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10320 516..6111 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10320.363.1

>prot_L-elsbetiae_contig10320.363.1 ID=prot_L-elsbetiae_contig10320.363.1|Name=mRNA_L-elsbetiae_contig10320.363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=327bp
PAFSCLSSSSRFTGKERADLIMAGGFMKHATVLVAALLLPQNSSAFVLQC
SGRYATAAATMRHSTRSAAGEGGAATGRGEFLSGAAAATAAVLGIASSGV
AGMAPAGALVKGNAPPPGYNKKRGSGYGNGEPEASATAGANAEDGDPSRT
FSVTKTGNRFKDIKIGDGPEVKAGGVVDMRYRVEKLGKRSYDGISGETQS
VFSLGYGEDDDKEGDVLTVPLGAGRLVSAVDEGVVGMRVGGVRRVAVRPE
RGWKKQDPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEPKPVGYGATRR
MARRFDETLIVEVEVVDTRENNGRIF*
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mRNA from alignment at L-elsbetiae_contig10320:516..6111-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10320.363.1 ID=mRNA_L-elsbetiae_contig10320.363.1|Name=mRNA_L-elsbetiae_contig10320.363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5596bp|location=Sequence derived from alignment at L-elsbetiae_contig10320:516..6111- (Laminarionema elsbetiae ELsaHSoW15)
CCGGCGTTCAGTTGTCTCTCCTCGTCATCCCGCTTCACAGGAAAGGAACG
TGCCGACTTGATCATGGCGGGAGGGTTTATGAAGCATGCAACAGTGCTGG
TTGCTGCTCTTCTTCTCCCTCAGAACAGCAGTGCTTTTGTCCTGCAGTGC
AGCGGCCGATACGCAACAGCAGCGGCGACAATGCGTCACAGCACCCGATC
TGCTGCCGGTGAGAGAAATAGAGGGCCAGAGAGCACACCGCTGGCTTGCC
CGAGAGTTGGGACATCCTGTCATGTAGTCCTTACCCGCTCGCAGTAGTAC
CTTGATGCACGTACATACATATGTACGTGTGCAGGAAACGAACGCATGCG
TACATTCATTCGTAAGATCATGTGACACACAACACACCCACCACGCCGTG
CGGGGATCTACGGCAGCACAAAGCAGTAGTACCTGTGTAACGTGATACGA
GATCTAGGTTTGCATCATACTGTTGTCCACGCCATCGCACTCTTGACCAT
GTGTTGCACGCGCTGCGTGTGGCCGTGACGAGACGGTGGCAACCAAATAA
AAGGCGGTTACAATAGAACGTTAGAACGTTAGAACTTCATGTGTCGGTCT
CACCGCGTACATAGCTTTGTATCTACGATCTACCGGTATCTACGGAGTAC
ATACCGTAGGTGACACAAGATACCATACCCCCTGGAAAGATTTTCGAAGC
TCGATTTCTCCCCAGCAAGAAGAGTGCCAGTGCCGAAAGGGGTGGCGTTG
GAATATCTAGTCGAAAGCTGTCCGAAAATGTGTTGTTTGGTGCTAAATAG
CACCCTCTTCGTTACGGAGTAATGGAGCTCTAAAGTTCGATCCAGGGGGT
GTGGTATCTTGTGTCACCTACGGTATGTACATATCAGTCTCTTTATCTAT
GTATCTTGGGCGTATCTCTACATAGACAGGTAATTGGACATGCAGCAGTG
TTGTCTTTGATCGATGAAGAGAGCAAGACGCCGTCATGGTTCACGTTCAT
TTCTGCTGCGTACATGTGCACGCAGAACGAAATCCAACCAGAAGTGTCTG
GGTGGCAAACGTGAGACTATGTATGTATCGGCAGCCCCTATTTGCACACC
TGGTGTGCAGATAACATCGTGCAAACCTCGTGTCTGATTGGCCGAAGAAC
CGCCGCACGGTTTTTGTACGAACGCCAACTGAACGCGCAGCGAAACCGCC
AAAGAGGCGACTTTCGCACCCGATCACCCCATAGGTCACGCGTTTGGGCC
GGGGTTAGGGTTAGGGTTAGGGTTGGGGTTGGGTTGGGTCGGGAGCGGCA
TAGACTCGCAAAGTGTTGCCACGAGGGGTACAAAAGAGGCGTTCGAGGTG
TGCACGATGTTATTTGCACACCAGGTGTGCAAATAGGGGGCTGCCCTGTG
TGTCTTGTACGTATGTACGTACGAAGTATGCATACGTGATCCAGCACTGT
ACACACAGCGACGTTGGATTTTGGACTAGAACGCTTATGCGAGAAAGAAC
AACAACAGCAACAACAGCAGCAGCTGTGTACCAGGGAGAGATGTTCTACG
TACTATCTAGGCTGGCCTTTTTGCGTGTTAGCAACCAACACGTGTGTACT
TGTGCCATTTTGCTCCCACATCTGCATAGGCGAAGGAGGAGCAGCCACGG
GGCGTGGAGAGTTTCTGTCGGGGGCCGCCGCGGCTACGGCAGCCGTGCTG
GGAATAGCTTCCTCCGGTGTGGCCGGCATGGCCCCTGCCGGCGCGCTCGT
TAAGGGCAACGCGCCGCCGCCGGGGTACAACAAGAAGCGTGGGAGCGGGT
ACGGAAACGGAGAACCTGGTGAGGCTCGGCACTTTGTTTAGTTAATGGAT
ACAAATGTCAGCAGTCTACGTCGAGTCTGCGAAAAAGTCGCTCCAGAGGG
GCTGTTTTGTGTTGCTTCCTCTACGGAGTGCAGTGCAAGCAGTGCGGGTG
TTTTAATCCTCAACACCAAGCCGAACCCGAACCCTAAATCTACGTGCATA
CGTTGTGTGTGTGTCGCTCTACCTTTCTCTCTTTATCATAGATCTACTCG
TATCCCCTACGCATACCCCACGTGCTGCCCACTGGCCCACGCACCGTGAG
CCCAAGGGGGCACACGCATCGGACTCGTACCTCAAGTACCACAATCGCGC
TTTGACGTGTTTTCTATTGTTCCCGGGGTGGTTTGTTGGTGTTGCAGAGG
CATCTGCCACCGCCGGCGCTAACGCAGAGGATGGTGATCCGTCGCGCACG
TTCTCCGTTACGAAGACGGGCAATCGGTTCAAAGATATCAAGATCGGGGA
CGGGCCAGAGGTGAGGTCGAGGACCGTGGAGGGGGTTGTGGCTTTTAAGT
GTCTGGTGTCTTGATGCAGAGGCGGGGGGGGCGTTGTTGCTGTTGCTGTA
CATAGCTCCTGTTGGGGCGGCAGCGGTCTCGTTTCCTCCGGGCTGTCGTC
GTTGCTGTTGTACGTGTTTTCAGTTGCCGATGTTGCTCTTTTTCGCCGCC
GCCGCCGCCGCCGCTGCTGCTGCTGCTGCGACTCTTAAGTCAACGGTTGG
TATCCTCAATGGATCACTCAGTATACCACCATCACCGTTGCCGACTCCAT
GCTATCCCCGACCCGCCCCGGCAATCAATGCCGCCGTCAGTCCCAACACC
GGCGCAGCAGGGAAAAGAACAGCAAAGCAGCAGCAGCGACGGCAGCGCAG
AACCACCAGCCAGCAACCGCTGAGCAGCCAGGGTCAATATATTCAAGAGT
AACTGGTTTGGGGTGTGGGTGGGCGGCCTTTTCCTGCCGCCTCTCTCCAT
TCCGTGCTCTCTTGTTCTCCCTTCCTCTACCCGCCGCCCCGCACCAGGTG
AAAGCAGGGGGCGTGGTGGACATGAGATACCGTGTCGAAAAGCTGGGGAA
GAGGAGCTACGATGGGATCTCCGGAGAGGTTTGAAGATATACATACGAAG
CACCGTATTACATCAGCGCCTACGTGATAAATTACTCATTTCTCATTGTG
CTGAATGAACCCGACCGCTGACTTTTCCGGGCACAGAGAAACGACATTTG
GCACGCAGGGACGCTGGTTCCGCCTTGTACTCTTGGGGGACGTGCTCGCC
GTTAAACTTCTTTCGCGATCGCCTTGCTGCCATCCAAACTACATATATGT
AGGGTTATCTCCATGTCGACACAATTCGAGAAGCTATGTCATCCTGTCTT
AGCATGGCACGTCGCACTGTTTCCTTAGTTGGTAGGAAGGTTTTGCTTTC
TACATGGAGGCCGACGTTGCGGTGTCCGCCGACAACAGCGGCGGTGTGTA
TACACATATGGGCTTCGAAACCGAGACAAAGAGTGCGCGTTTTGGAGCCT
GAGACAATAAGGATGTCACCGTCTGACGGCATAGGTTGGCGATGTCACCT
ACTGGATGTTTGCTTTGTGTGTTTTCCTACCGGCAGACACAATCGGTGTT
TTCGCTGGGGTACGGAGAAGATGACGACAAGGAGGGAGATGTCTTGACAG
TCCCCCTGGGCGCGGGGAGGCTCGTCAGCGCCGTCGATGAGGTTTGTCGT
CGTGTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTGTTTGTTAATTGTTGTTGT
TGCTGGTGCTGTTGTTGCTGCTGTTGCTGTTGCCATTGCCGTTGCTGTTG
CTGTGGTGTTGTTGTTGTGGTGGTGGTGGTGGATGTTGTTGTTATTGTTG
TTGTTCGTGTTAACGGGGGCGAGCTAAACTTCGGTAACGCTTGGACGTCG
AAGGCATCGCTTGTCGGCGTCAAGCCTTGACGCCTGTCAGTCTTGCTCAC
TCCCCTTCAAGCCTAATATCATGGGAATACTTTCTTCGAGACGAGCGAAT
GAGAAAATATGTCAACAACAAACAGCAGCACCAAGCGTAACCAAAAAAGC
TAGTAAGGCAGTACCTCCACCGCCGCCCGCTATCCCCTCCGCCGCCGTCG
CTGTTTTCCTTGCGTCCGGTCTGTGTGGTCGTCCTTCCCCTTCAAACTGT
GTTGTCCCCCTTTTGTTTTAGGGGGTTGTCGGCATGCGCGTCGGGGGTGT
GCGGCGGGTGGCGGTGAGGCCGGAGAGAGGCTGGAAGAAGCAGGACCCCA
AGTGCGCCACAGAAATAGATATGGGGGTTATGTCCGGCGTGCCTGGCGCG
GCGCTGGCGAAGGTGAGGGAGAGAGGGAGAAAGAGGGAGGGAGGGAGGGA
GGGAGGGAGAGAGAGAGAGAGAGAGATAGAAAGAGGCAGGAAAGGCTTGT
TGGCATGGCAGTGGTTGGTGGACTTCCCTGTGTGGTGTAGTCTAGCTGCT
CACCTTTCGCTTGCTGAGTTTTTCGCGGAGAAAGCCTCTTTCTATCTTTT
GGTGTATCTAGTGGTCGTCTCCTCTTTCGCTTGATGGCTTTTGGTGGAGA
AAGTTCTGGTGTAGGTGCTTTACTCTGTTCAGGCCGTGTGGGAACGGTTA
TCTCCGCGCCGTTTTTGTTTTCCTTATAGAAACCGGATTTTTCAACTCGC
GGTCAGTGCGCGCGGGCGTTAGTCCTCTTCTCTTGCTGGAAGCGTAGTAG
CTGAAAGACCATTTGTTTTGGTTTGGACATCTCCCTTATATGTAGTAAAA
AACAAAATCAGCAACCCCTTGAGACCGGTCTGGTTATGCCCGGGTGCTTC
GTCGCGATGAGGTTGCGGCACCACCGGCATAAACACGCTGTGTCGGACAA
CGGGACCATTGCGTTGGTAGACGGACTCATCGCTGTTGAAAAAAACACCC
GGCGATCAGAGGTCGGTGGCCTTGGAGGTGTGGGTCTAATACGTCACGTC
AGATGACAACAGGACCGCGTGTGGCGGGCACGGCGCACAATTGATTTTGT
GAACGGCTGCACAGATTTCGAGCGGGGCAAACGAGCACGTGGGCGACAAT
GGCTCTGATACCTTATTTTGCCAGGAGCAAACGGGCACGGGGGTGGCGAT
GGCTCTGAATACCGTATCTTGTCATTGGTACAAGAGCCTGTGCTGCTGTG
TACGCGTGACCCTGTGCCACTACCCCTTCGAGACATTCGCCTGCCGCTTG
GAACCCTTACTCGTCTCCAGCGAGGCGCCCGGCACGGCAGCTATTGTTGC
TGTCTGCACAAGCTTAGGCCGGGCTGATGCTGCGCGGGCGTTCGGAGCGG
TGGGGCATGCTCAACGTGTGGGGCCATTCCCTTCTGTAGCACGCACAGCA
GAAGCCGCGAGAGGCAGTTAGACCATCCCTCTTTTCTTCGAGCGCTTCCG
CCACCCCCCAGTGCTTCTTACCGGAAATGTCGACATGATTGTTTGTTTTT
TTATCCCCAGCGGGCGCGCACCGCTGTTCCTACCTCTCTTGGCTTGAAGT
TGTCGACTCTCTGTTGTTCATCTCTCTATCTTCTTTGTGTGGTTTCTCTC
AGGTGGAAGACTGCATCGACCTCACGCTGGAGCCCAAGCCGGTGGGCTAT
GGTGCCACGCGAAGGATGGCCCGTCGCTTCGATGAGACCCTCATCGTCGA
GGTGGAGGTGGTGGACACCAGGGAGAACAACGGGAGAATATTCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10320:516..6111-

>mRNA_L-elsbetiae_contig10320.363.1 ID=mRNA_L-elsbetiae_contig10320.363.1|Name=mRNA_L-elsbetiae_contig10320.363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1962bp|location=Sequence derived from alignment at L-elsbetiae_contig10320:516..6111- (Laminarionema elsbetiae ELsaHSoW15)
CCGGCGTTCAGTTGTCTCTCCTCGTCATCCCGCTTCACAGGAAAGGAACG
TGCCGACTTGATCATGGCGGGAGGGTTTATGAAGCATGCAACAGTGCTGG
TTGCTGCTCTTCTTCTCCCTCAGAACAGCAGTGCTTTTGTCCTGCAGTGC
AGCGGCCGATACGCAACAGCAGCGGCGACAATGCGTCACAGCACCCGATC
TGCTGCCGCCGGCGTTCAGTTGTCTCTCCTCGTCATCCCGCTTCACAGGA
AAGGAACGTGCCGACTTGATCATGGCGGGAGGGTTTATGAAGCATGCAAC
AGTGCTGGTTGCTGCTCTTCTTCTCCCTCAGAACAGCAGTGCTTTTGTCC
TGCAGTGCAGCGGCCGATACGCAACAGCAGCGGCGACAATGCGTCACAGC
ACCCGATCTGCTGCCGGCGAAGGAGGAGCAGCCACGGGGCGTGGAGAGTT
TCTGTCGGGGGCCGCCGCGGCTACGGCAGCCGTGCTGGGAATAGCTTCCT
CCGGTGTGGCCGGCATGGCCCCTGCCGGCGCGCTCGTTAAGGGCAACGCG
CCGCCGCCGGGGTACAACAAGAAGCGTGGGAGCGGGTACGGAAACGGAGA
ACCTGGCGAAGGAGGAGCAGCCACGGGGCGTGGAGAGTTTCTGTCGGGGG
CCGCCGCGGCTACGGCAGCCGTGCTGGGAATAGCTTCCTCCGGTGTGGCC
GGCATGGCCCCTGCCGGCGCGCTCGTTAAGGGCAACGCGCCGCCGCCGGG
GTACAACAAGAAGCGTGGGAGCGGGTACGGAAACGGAGAACCTGAGGCAT
CTGCCACCGCCGGCGCTAACGCAGAGGATGGTGATCCGTCGCGCACGTTC
TCCGTTACGAAGACGGGCAATCGGTTCAAAGATATCAAGATCGGGGACGG
GCCAGAGAGGCATCTGCCACCGCCGGCGCTAACGCAGAGGATGGTGATCC
GTCGCGCACGTTCTCCGTTACGAAGACGGGCAATCGGTTCAAAGATATCA
AGATCGGGGACGGGCCAGAGGTGAAAGCAGGGGGCGTGGTGGACATGAGA
TACCGTGTCGAAAAGCTGGGGAAGAGGAGCTACGATGGGATCTCCGGAGA
GGTGAAAGCAGGGGGCGTGGTGGACATGAGATACCGTGTCGAAAAGCTGG
GGAAGAGGAGCTACGATGGGATCTCCGGAGAGACACAATCGGTGTTTTCG
CTGGGGTACGGAGAAGATGACGACAAGGAGGGAGATGTCTTGACAGTCCC
CCTGGGCGCGGGGAGGCTCGTCAGCGCCGTCGATGAGACACAATCGGTGT
TTTCGCTGGGGTACGGAGAAGATGACGACAAGGAGGGAGATGTCTTGACA
GTCCCCCTGGGCGCGGGGAGGCTCGTCAGCGCCGTCGATGAGGGGGTTGT
CGGCATGCGCGTCGGGGGTGTGCGGCGGGTGGCGGTGAGGCCGGAGAGAG
GCTGGAAGAAGCAGGACCCCAAGTGCGCCACAGAAATAGATATGGGGGTT
ATGTCCGGCGTGCCTGGCGCGGCGCTGGCGAAGGGGGTTGTCGGCATGCG
CGTCGGGGGTGTGCGGCGGGTGGCGGTGAGGCCGGAGAGAGGCTGGAAGA
AGCAGGACCCCAAGTGCGCCACAGAAATAGATATGGGGGTTATGTCCGGC
GTGCCTGGCGCGGCGCTGGCGAAGGTGGAAGACTGCATCGACCTCACGCT
GGAGCCCAAGCCGGTGGGCTATGGTGCCACGCGAAGGATGGCCCGTCGCT
TCGATGAGACCCTCATCGTCGAGGTGGAGGTGGTGGACACCAGGGAGAAC
AACGGGAGAATATTCTGAGTGGAAGACTGCATCGACCTCACGCTGGAGCC
CAAGCCGGTGGGCTATGGTGCCACGCGAAGGATGGCCCGTCGCTTCGATG
AGACCCTCATCGTCGAGGTGGAGGTGGTGGACACCAGGGAGAACAACGGG
AGAATATTCTGA
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