mRNA_L-elsbetiae_contig10313.359.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10313.359.1
Unique NamemRNA_L-elsbetiae_contig10313.359.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: D7FXR7_ECTSI (S-adenosyl-methyltransferase MraW n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR7_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.590e-33
Identity = 95/196 (48.47%), Postives = 103/196 (52.55%), Query Frame = 1 
Query:    1 QAEAGRFQAVRSNFADVGRAVRDCGLLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDDPSPGSLLSADGMVDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRN------PGPKDEEDRAPWNGGVG-GMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 567
            +AE GRFQAVRSNFA VGRAVR+C L+L                                               P    SA  +VDGILVDLGVSS QIDD ARGFSFSADGPLDMRMEG G G  V  R+         ++ EDRA   GG G G            +SA DVVNFADE EIREMVWRYGDEKR
Sbjct:   62 EAEVGRFQAVRSNFAAVGRAVRECELMLQQPPLAPEASTAPAPAAGV----------------------------PPRTTSAGPLVDGILVDLGVSSHQIDDEARGFSFSADGPLDMRMEGTGDGDSVGERSGFGGVASTSREHEDRAVEKGGRGEGXXXXXXXXXXXXVSAADVVNFADESEIREMVWRYGDEKR 229
[Close]
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A6H5J8S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S8_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 7.020e-33
Identity = 128/221 (57.92%), Postives = 135/221 (61.09%), Query Frame = 1 
Query:    1 QAEAGRFQAVRSNFADVGRAVRDCGLLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDDPS-------------------------PGSLLSADGMVDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRN------PGPKDEEDRAPWNGG-VGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 567
            +AEAGRFQAVRSNFADVG+AVR+C LLL              XXXXXXXXXXXXXXXXXXXXXXXXXXXX                              P    SA  +VDGILVDLGVSS QIDDGARGFSFSADGPLDMRMEG G G     R+      P     EDRA   GG  GG       G GG +SA DVVN+ADE EIREMVWRYGDEKR
Sbjct:  438 EAEAGRFQAVRSNFADVGKAVRECELLLQQPPLVPEAESPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRTTSAGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTGDGDSAGERSWFGGVAPTSTKHEDRAVEKGGRAGGGDXXXXRGSGGGISAADVVNYADESEIREMVWRYGDEKR 658
[Close]
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A1F3AE72_9PROT (Ribosomal RNA small subunit methyltransferase H n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3AE72_9PROT)

HSP 1 Score: 69.7 bits (169), Expect = 8.600e-11
Identity = 47/113 (41.59%), Postives = 57/113 (50.44%), Query Frame = 1 
Query:  235 LLSADGM--VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 567
            LLSA+G+  VDG+ +DLGVSS Q D   RGFSF  DGPLDMRME                    R P                    SA D+VN ADE E+ ++ WRYG+E+R
Sbjct:   86 LLSAEGVKDVDGVALDLGVSSMQFDRAERGFSFRGDGPLDMRME-------------------KRGP--------------------SAADLVNEADEAELADIFWRYGEERR 159
[Close]
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A4R3J9J7_9PROT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3J9J7_9PROT)

HSP 1 Score: 69.7 bits (169), Expect = 9.460e-11
Identity = 44/104 (42.31%), Postives = 57/104 (54.81%), Query Frame = 1 
Query:  256 VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 567
            +DG+ +D GVSS Q+D   RGFSF ADGPLDMRM GG  G    G      D  ++AP                    SA DVVN A E E+ +++WRYG+E++
Sbjct:   94 IDGVAMDFGVSSMQLDSPERGFSFRADGPLDMRM-GGASGDVAHG-----DDAHNKAP--------------------SAADVVNTAGEKELADIIWRYGEERQ 171
[Close]
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A6M2BUK4_9GAMM (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Solimonas terrae TaxID=1396819 RepID=A0A6M2BUK4_9GAMM)

HSP 1 Score: 68.2 bits (165), Expect = 2.600e-10
Identity = 41/105 (39.05%), Postives = 52/105 (49.52%), Query Frame = 1 
Query:  250 GMVDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEK 564
            G +DG+L+DLGVSS Q+DD  RGFSFS DGPLDMRM               P+  E  A W                        +  A+E EI +++WRYGDE+
Sbjct:   92 GQIDGVLMDLGVSSPQLDDAGRGFSFSKDGPLDMRMN--------------PQAGESAADW------------------------LARAEEAEIADVIWRYGDER 158
[Close]
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A3M2I4N9_9GAMM (Ribosomal RNA small subunit methyltransferase H n=2 Tax=Lysobacter pythonis TaxID=2483112 RepID=A0A3M2I4N9_9GAMM)

HSP 1 Score: 67.4 bits (163), Expect = 5.770e-10
Identity = 44/112 (39.29%), Postives = 56/112 (50.00%), Query Frame = 1 
Query:  229 GSLLSADGMVDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEK 564
            G   +ADG+ DG+L DLGVSS Q+D+  RGFSF+ DGPLDMRM+   G              E  A W                        +N ADE EI E++WRYG+E+
Sbjct:   95 GEWAAADGL-DGVLFDLGVSSPQLDEAGRGFSFNKDGPLDMRMDASAG--------------ESAAGW------------------------INRADEREIAEVLWRYGEER 167
[Close]
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: RSMH_MARN8 (Ribosomal RNA small subunit methyltransferase H n=21 Tax=Marinobacter TaxID=2742 RepID=RSMH_MARN8)

HSP 1 Score: 66.2 bits (160), Expect = 1.480e-9
Identity = 40/103 (38.83%), Postives = 51/103 (49.51%), Query Frame = 1 
Query:  256 VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEK 564
            VDG+L+DLGVSS Q+DD +RGFSF  DGPLDMRM               P+ E   A W                        +  ADE EI +++WRYG+E+
Sbjct:  104 VDGVLMDLGVSSPQLDDASRGFSFMRDGPLDMRMN--------------PQQEPSAAQW------------------------LAEADEREIADVIWRYGEER 168
[Close]
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A512NJZ6_9HYPH (Ribosomal RNA small subunit methyltransferase H n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A512NJZ6_9HYPH)

HSP 1 Score: 65.9 bits (159), Expect = 1.950e-9
Identity = 45/113 (39.82%), Postives = 57/113 (50.44%), Query Frame = 1 
Query:  235 LLSADGM--VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 567
            LLSA+G+  VDG+ +DLGVSS Q D   RGFSF A GPLDMRME  G                                        SA D+VN ADE E+ ++++RYG+E+R
Sbjct:   84 LLSAEGVEDVDGVALDLGVSSMQFDQAERGFSFRAFGPLDMRMEKNGS---------------------------------------SAADLVNEADEAELADIIFRYGEERR 157
[Close]
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A2D5DH54_9SPHN (Ribosomal RNA small subunit methyltransferase H n=3 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2D5DH54_9SPHN)

HSP 1 Score: 65.1 bits (157), Expect = 3.730e-9
Identity = 44/114 (38.60%), Postives = 61/114 (53.51%), Query Frame = 1 
Query:  232 SLLSADGM--VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 567
            S+L+A+G+  VD +++D+GVSS Q+D+ ARGFSF ADGPLDMRM                                     G DG   SA D +N ADE EI ++++ YG+E+R
Sbjct:   85 SILAAEGIEAVDAVVLDIGVSSMQLDEAARGFSFRADGPLDMRM-------------------------------------GQDG--PSAADFLNEADEEEIADVIYLYGEERR 159
[Close]
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A318ED41_9GAMM (Ribosomal RNA small subunit methyltransferase H n=2 Tax=Sinimarinibacterium flocculans TaxID=985250 RepID=A0A318ED41_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 3.790e-9
Identity = 41/105 (39.05%), Postives = 52/105 (49.52%), Query Frame = 1 
Query:  250 GMVDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEK 564
            G VDG+L+DLGVSS Q+DD ARGFSFS DGPLDMRM               P+  E  A W                        +  A E EI +++WR+G+E+
Sbjct:  114 GRVDGVLMDLGVSSPQLDDAARGFSFSKDGPLDMRMN--------------PQAGESAAQW------------------------LARAQEAEIADVLWRFGEER 180
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXR7_ECTSI1.590e-3348.47S-adenosyl-methyltransferase MraW n=1 Tax=Ectocarp... [more]
A0A6H5J8S8_9PHAE7.020e-3357.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1F3AE72_9PROT8.600e-1141.59Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A4R3J9J7_9PROT9.460e-1142.31Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A6M2BUK4_9GAMM2.600e-1039.05Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A3M2I4N9_9GAMM5.770e-1039.29Ribosomal RNA small subunit methyltransferase H n=... [more]
RSMH_MARN81.480e-938.83Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A512NJZ6_9HYPH1.950e-939.82Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A2D5DH54_9SPHN3.730e-938.60Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A318ED41_9GAMM3.790e-939.05Ribosomal RNA small subunit methyltransferase H n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10313contigL-elsbetiae_contig10313:3931..6523 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score135.2
Seed ortholog evalue3.2e-29
Seed eggNOG ortholog2880.D7FXR7
KEGG koko:K03438
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
EggNOG free text desc.rRNA (cytosine-N4-)-methyltransferase activity
EggNOG OGsCOG0275@1,KOG2782@2759
EC2.1.1.199
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain
Ec32 orthologEc-13_002630.1
Exons2
Model size567
Cds size567
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815260.447698-CDS-L-elsbetiae_contig10313:3930..43181622815260.447698-CDS-L-elsbetiae_contig10313:3930..4318Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10313 3931..4318 +
1691682802.4552467-CDS-L-elsbetiae_contig10313:3930..43181691682802.4552467-CDS-L-elsbetiae_contig10313:3930..4318Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10313 3931..4318 +
1622815260.4583352-CDS-L-elsbetiae_contig10313:6344..65231622815260.4583352-CDS-L-elsbetiae_contig10313:6344..6523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10313 6345..6523 +
1691682802.468616-CDS-L-elsbetiae_contig10313:6344..65231691682802.468616-CDS-L-elsbetiae_contig10313:6344..6523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10313 6345..6523 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10313.359.1prot_L-elsbetiae_contig10313.359.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10313 3931..6523 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10313.359.1

>prot_L-elsbetiae_contig10313.359.1 ID=prot_L-elsbetiae_contig10313.359.1|Name=mRNA_L-elsbetiae_contig10313.359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp
QAEAGRFQAVRSNFADVGRAVRDCGLLLPPKTSPPPPPPPPPLGAAAAPA
AVAAVAAAAPAAAAAATSSSPDDPSPGSLLSADGMVDGILVDLGVSSRQI
DDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGG
MRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR
back to top

mRNA from alignment at L-elsbetiae_contig10313:3931..6523+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10313.359.1 ID=mRNA_L-elsbetiae_contig10313.359.1|Name=mRNA_L-elsbetiae_contig10313.359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2593bp|location=Sequence derived from alignment at L-elsbetiae_contig10313:3931..6523+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGCGGAGGCGGGGAGGTTTCAGGCGGTCCGCTCCAACTTCGCTGACGT
TGGGAGGGCGGTCAGAGACTGCGGGCTCCTGCTGCCCCCCAAGACATCTC
CACCACCACCGCCGCCGCCGCCGCCGCTTGGAGCGGCAGCAGCTCCGGCA
GCAGTAGCAGCAGTAGCAGCAGCAGCTCCGGCAGCAGCAGCAGCAGCGAC
ATCGTCATCCCCTGACGATCCGAGCCCGGGCTCGTTGTTGTCGGCGGACG
GCATGGTAGACGGCATCTTGGTGGACCTGGGCGTGTCCTCTCGCCAGATC
GACGACGGTGCGAGGGGGTTCAGCTTCTCCGCCGACGGTCCGCTGGACAT
GCGCATGGAGGGCGGTGGCGGCGGCCCTGATGTCGAAGGTATTTACCACG
GGGGCCGCCTACGCAGAAATTAATTTAATACTACTAACTCTAACCCTAAC
CCTAACCCCAACCACCGACCCCCCCAAACGGTTTCCATACTTTATCCCAT
ATGTTAGCTTAAGACAAAAACCCCGCGTAGACTACTGCGGAGTATTCATG
TTTTTTTTTTTTTTTTTTTTTTTTCGCGTTTATTATCAGTGCTCGATGGG
CTCCTTGCTTGTCACGAGGGCATCTTGCCAGAGTACTGAACCGTGGTCAC
GCAGAAGGGTTCTGTTTTCCCCGAGGCCCCCACTCCCCCCTTCTGCGGTG
CTTGCCTAAGATTTTTGTCGCGAGAAGGGTTGAGCCGTCCCTTTCCCTCG
TCGACGGTGAGGTTGAACTTTTGTGTACACTACTTATGCTTCACAAATGC
TGCAAACGTACCTATTGCATCTAAATGTGTTTTTTATGTTTTTTTATGTT
TTTTGCGAAGCTACTTAAGTATGTAACATTTGTATTTAGTATACATGTTT
TTGCTCTCTTTGTTGTTCCAGTCTCTGTACATACGCGGCATGGAGGTGTT
ACATGTATTGTAAGATGTACCTCAGTCTGGTACTTGGTTTAACCTTTTGC
CTGGCTTATAGTATATCTTTTATAACACTGCCAGCACCATAACAGAGGGC
AGTGGCAGTCGCGGCCCTAATGGCACACAAATTGATGATTTGGTGTGTCC
AATTGCATGCTAATCATGAAGCAGTTGTGTGCCATATATCTATTATAATA
GTGGCTAAATCTCTCTCCCCGATTCGCGCCACAAATGTAACCGAAACATG
CCTCCACAATATAATCGGGGGGAGGACTATGTAGCAGACCTGTGCGGGCC
TGGCCGGCGAGAACCCGGCGCGGAACCCCCCGGCTTTGCTGGGGTACCAA
GATAGTGGTGTTGGCTGTGTTCCAGTTTTGTTTTACCTTACATAGCGTGT
AGAGGGGAGCGAAGGGCTCCAGATCCGATATCTGTTTTATTGTTGCTTTG
CTGGCCCTTCAGGTCCATTTTATTTTTGTGTACCTTTTCTTAGGTATAAG
TTAGCCTGTGACCACGGGAATTGACCGCATCAAGTGTTGGATTAGTACGG
ACATTGAGAGCTACTGGATGGAGAGATCGGAACGGTTTTTAATGTGAAGA
CAACATACGTACCATACATACATACATTACCCCCACCAGGACCCGTGAAC
GTTTCCCCCCGAAAACGCGCTTTTGTTTTTTTGTTATTTTTCATGATATG
TGCCATTTTTACGGTATGTAGCCCCAAGTTACCCTTGTTCGTTGTTGTTG
TTGCTGCTTCTTCACATTAGAGGGTTTGCTCGTATAATCGAGATCGCTAA
TTCCAAAAATATAGCAACTCACGGCCCGTGGTCATAGAGGTGCTACATAC
CGCAGGTGACACAAGATACCACACCCCCTGGACCGACTTTTAGAGCTCCA
TTACTCCGTAACGAAGAGGGTGCCGGCACCGAAGGGCACATTTTCGGACA
GCCCTGGACTAGATCTTTCCAACGCCACCCCTTTCGGCACTGGCACTCTT
CTTGCTGGGGAGGGATCTAGCTTTGAAAACCTGTCCAAGGGGTGTGGTAT
CTTGTGTCACCTACGGTAGAGCCATCAGAAGATCCGAAAAGGACACACGC
AGATACATCCTGTTACCACGGGAATCGACCGCGTCGAGTGTTGGATTAGT
ACGGACATAGGGAGGTACTGGGTGGAGAGATCGAAACGGTTTTTAATGTG
AAGAAACAACAACAACAACAACAACAACAGCAGCAGCGGCAACAACAACA
GCAACAGCAACAGCAACAGCAATAACAACAACAGCAATAACAGCAACAGC
AACAACAGCAACAGCAACAGCAACAGCAAACAACAACAACAACAACAGCA
ACAATAACAGCAATAACAACAACAGCAGCAGCAGATGAGACTCGGGGGCT
GCCCCCCGGCTTGTCCCCACCCCCCCCCCCCCCTCCCCCTCCCAACTTCG
TGGAAACCCCGCAGGCCGCAATCCCGGGCCGAAGGACGAGGAGGACAGGG
CCCCGTGGAATGGTGGGGTAGGGGGGATGCGGGGCAGAGAGAGCGGCGGC
GACGGCGGGGCGCTGTCGGCCTTTGACGTGGTCAACTTTGCCGACGAGAT
GGAGATCCGTGAGATGGTGTGGCGGTACGGAGACGAAAAGAGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig10313:3931..6523+

>mRNA_L-elsbetiae_contig10313.359.1 ID=mRNA_L-elsbetiae_contig10313.359.1|Name=mRNA_L-elsbetiae_contig10313.359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1134bp|location=Sequence derived from alignment at L-elsbetiae_contig10313:3931..6523+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGCGGAGGCGGGGAGGTTTCAGGCGGTCCGCTCCAACTTCGCTGACGT
TGGGAGGGCGGTCAGAGACTGCGGGCTCCTGCTGCCCCCCAAGACATCTC
CACCACCACCGCCGCCGCCGCCGCCGCTTGGAGCGGCAGCAGCTCCGGCA
GCAGTAGCAGCAGTAGCAGCAGCAGCTCCGGCAGCAGCAGCAGCAGCGAC
ATCGTCATCCCCTGACGATCCGAGCCCGGGCTCGTTGTTGTCGGCGGACG
GCATGGTAGACGGCATCTTGGTGGACCTGGGCGTGTCCTCTCGCCAGATC
GACGACGGTGCGAGGGGGTTCAGCTTCTCCGCCGACGGTCCGCTGGACAT
GCGCATGGAGGGCGGTGGCGGCGGCCCTGATGTCGAAGCAGGCGGAGGCG
GGGAGGTTTCAGGCGGTCCGCTCCAACTTCGCTGACGTTGGGAGGGCGGT
CAGAGACTGCGGGCTCCTGCTGCCCCCCAAGACATCTCCACCACCACCGC
CGCCGCCGCCGCCGCTTGGAGCGGCAGCAGCTCCGGCAGCAGTAGCAGCA
GTAGCAGCAGCAGCTCCGGCAGCAGCAGCAGCAGCGACATCGTCATCCCC
TGACGATCCGAGCCCGGGCTCGTTGTTGTCGGCGGACGGCATGGTAGACG
GCATCTTGGTGGACCTGGGCGTGTCCTCTCGCCAGATCGACGACGGTGCG
AGGGGGTTCAGCTTCTCCGCCGACGGTCCGCTGGACATGCGCATGGAGGG
CGGTGGCGGCGGCCCTGATGTCGAAGGCCGCAATCCCGGGCCGAAGGACG
AGGAGGACAGGGCCCCGTGGAATGGTGGGGTAGGGGGGATGCGGGGCAGA
GAGAGCGGCGGCGACGGCGGGGCGCTGTCGGCCTTTGACGTGGTCAACTT
TGCCGACGAGATGGAGATCCGTGAGATGGTGTGGCGGTACGGAGACGAAA
AGAGGGCCGCAATCCCGGGCCGAAGGACGAGGAGGACAGGGCCCCGTGGA
ATGGTGGGGTAGGGGGGATGCGGGGCAGAGAGAGCGGCGGCGACGGCGGG
GCGCTGTCGGCCTTTGACGTGGTCAACTTTGCCGACGAGATGGAGATCCG
TGAGATGGTGTGGCGGTACGGAGACGAAAAGAGG
back to top