mRNA_L-elsbetiae_contig14968.3564.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Match: D8LHB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB6_ECTSI) HSP 1 Score: 139 bits (349), Expect = 6.720e-37 Identity = 71/172 (41.28%), Postives = 104/172 (60.47%), Query Frame = 1 Query: 1 ISASDVDGSILLTRVAGDSPLDRNGKPIGPIPVSVDPLIKSNLAKVRKVFQLRADVDNEE----RATRDGEPAKRGVKKAILGVLPWGKAGWLHRRAMAQAKAHRGEVDVRITNRGVVEVSMDGRKVLSKGGPSFFGFRRRDPSYGMWASSNGIEVARREAPSWSLVAAEDI 504 I AS DG+I+ + G+ P D +G+ GP P ++ L+ S+ KV K +RA++ EE A +G+ KRG I G +P+GK G+L RRA AK H GEV++ +TNRG +E S+DG +V K GPS+FG+R +DPSY +W S +G+E+ R WS+ A + Sbjct: 161 IFASREDGAIVFAKATGEPPRDADGRVTGPTPETITTLVASDPGKVAKRSAIRAELLAEELHERTAQAEGKSGKRGALATIAGWMPFGKGGFLRRRAREHAKVHMGEVNLYVTNRGHLEGSVDGTRVARKSGPSWFGYRTKDPSYELWVSHSGVEITRNGMLDWSIEAENKV 332
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Match: D7FTM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM0_ECTSI) HSP 1 Score: 124 bits (310), Expect = 8.590e-33 Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = 1 Query: 1 ISASDVDGSILLTRVAGDSPLDRNGKPIGPIPVSVDPLIKSNLAKVRKVFQLRADVDN----EERATRDGEPAKRGVKKAILGVLPWGKAGWLHRRAMAQAKAHRGEVDVRITNRGVVEVSMDGRKVLSKGGPSFFGFRRRDPSYGMWASSNGIEVARREAPSWSLVAAEDI 504 + A+ DGS++ G P D G+ G +P L+ +N + K R+++ ++ A R+G K+ +G LP+GK G+LHRRA +A+AH GE +++T++G++EVS+DG VL K GPS+FGFRR DPSY + + GIEV+RR W V AEDI Sbjct: 2 VYAAPADGSVVFATSTGRVPRDEEGRATGSLPQKRLTLLAANERLMAKAEDFRSEIILRRLVKKNALREGRTLKKSKMSTFMGFLPFGKRGFLHRRARDRAEAHLGEATLKLTSKGILEVSVDGTVVLRKKGPSYFGFRRTDPSYELQVTEEGIEVSRRGDFVWG-VKAEDI 172
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Match: D8LNB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB2_ECTSI) HSP 1 Score: 112 bits (280), Expect = 2.890e-28 Identity = 65/166 (39.16%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 22 GSILLTRVAGDSPLDRNGKPIGPIPVSVDPLIKSNLAKVRKVFQLRADVDNEE----RATRDGEPAKRGVKKAILGVLPWGKAGWLHRRAMAQAKAHRGEVDVRITNRGVVEVSMDGRKVLSKGGPSFFGF-RRRDPSYGMWASSNGIEVARREAPSWSLVAAEDI 504 GS++ AG + D G+ IGP+P + +I N ++ K+ + R+++ + +A R+G KR AI GVLP+GK G+ RR A+AH E +++TN+G +EVS+DG V K PS+FGF RR+DPSY + + GIE+ RR W ++ AEDI Sbjct: 9 GSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAAREGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLMEATLKLTNKGNLEVSIDGTIVQRKSRPSWFGFLRRKDPSYKLLVTKEGIEIYRRGKLDW-VIKAEDI 173
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Match: A0A6H5L4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D4_9PHAE) HSP 1 Score: 112 bits (281), Expect = 2.400e-26 Identity = 62/168 (36.90%), Postives = 95/168 (56.55%), Query Frame = 1 Query: 7 ASDVDGSILLTRVAGDSPLDRNGKPIGPIPVSVDPLIKSNLAKVRKVFQLRADVD----NEERATRDGEPAKRGVKKAILGVLPWGKAGWLHRRAMAQAKAHRGEVDVRITNRGVVEVSMDGRKVLSKGGPSFFGFRRRDPSYGMWASSNGIEVARREAPSWSLVAAE 498 AS DGS++L G++P D +G GP+ + L+ +N K+ KV LR++ ++R R+G + G ++G +P+GK G+L RRA +A+ GE + ITN+G + VS+DG VL K GP FGFRR D SY + + G+ ++RR W L A + Sbjct: 252 ASPTDGSVILATAIGNAPRDADGNTTGPVTQNNRTLLTANPRKMSKVRALRSENIVAGLEKKRVAREGRTLREGKLATLMGFMPFGKHGFLRRRAREHVEAYMGEATLSITNKGGLGVSVDGIVVLRKSGPYCFGFRRTDRSYELRVTEAGVVISRRGMYDWGLKAQD 419
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Match: D7FMM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM4_ECTSI) HSP 1 Score: 112 bits (281), Expect = 4.980e-26 Identity = 61/172 (35.47%), Postives = 100/172 (58.14%), Query Frame = 1 Query: 1 ISASDVDGSILLTRVAGDSPLDRNGKPIGPIPVSVDPLIKSNLAKVRKVFQLRADV----DNEERATRDGEPAKRGVKKAILGVLPWGKAGWLHRRAMAQAKAHRGEVDVRITNRGVVEVSMDGRKVLSKGGPSFFGFRRRDPSYGMWASSNGIEVARREAPSWSLVAAEDI 504 + A+ +DGS++ G P D + I P+ + L+++N ++ V LRA++ + E+A +G+ KR +LG LP+GK G+ RRA +A AH GE + +TN+G +EVS+DG VL K GPS+FGFR++D +Y + + +G+ V+R W + A E + Sbjct: 314 VYATSIDGSVVHATATGTPPGDLEDRSIDPVSQTRRTLLEANPQRMSIVEGLRAEIVAETEEAEKAAVEGQGLKRSKMVTVLGFLPFGKHGFRRRRARERAAAHLGEAALSVTNKGDLEVSVDGSIVLRKSGPSWFGFRKKDSTYEVRVTEDGVVVSRGGKYDWGIQAREPL 485
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Match: D8LNB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB6_ECTSI) HSP 1 Score: 111 bits (277), Expect = 2.840e-25 Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 1 Query: 25 SILLTRVAGDSPLDRNGKPIGPIPVSVDPLIKSNLAKVRKVFQLRADVDNEE----RATRDGEPAKRGVKKAILGVLPWGKAGWLHRRAMAQAKAHRGEVDVRITNRGVVEVSMDGRKVLSKGGPSFFGF-RRRDPSYGMWASSNGIEVARREAPSWSLVAAEDI 504 S++ AG + D G+ IGP+P + +I N ++ K+ + R+++ + +A R+G KR AI GVLP+GK G+ RR A+AH E +++TNRG +EVS+DG V K PS+FGF RR+DPSY + + GIE+ RR W ++ AEDI Sbjct: 458 SVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAAREGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLMEATLKLTNRGNLEVSIDGTIVQRKSRPSWFGFLRRKDPSYKLLVTKEGIEIYRRGKLDW-VIKAEDI 621
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Match: D7G9B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B0_ECTSI) HSP 1 Score: 110 bits (275), Expect = 3.160e-25 Identity = 60/152 (39.47%), Postives = 89/152 (58.55%), Query Frame = 1 Query: 55 SPLDRNGKPIGPIPVSVDPLIKSNLAKVRKVFQLRADVD----NEERATRDGEPAKRGVKKAILGVLPWGKAGWLHRRAMAQAKAHRGEVDVRITNRGVVEVSMDGRKVLSKGGPSFFGFRRRDPSYGMWASSNGIEVARREAPSWSLVAAE 498 +P D +G GP+P L+ +N K+ KV LR++ ++RA +G +RG ++G LP+GK G+L RRA A+AH GE + IT +G +EVS+DG VL K GPS+FGFRR D SY + + G+ ++RR W + A + Sbjct: 338 APRDADGNTTGPVPQKNRTLLTANPRKMSKVRALRSENIAARLEKKRAALEGRTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHMGEATLSITKKGGLEVSVDGIVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYDWGIKAQD 489
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Match: A0A6H5K5J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J3_9PHAE) HSP 1 Score: 110 bits (276), Expect = 4.150e-25 Identity = 63/166 (37.95%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 22 GSILLTRVAGDSPLDRNGKPIGPIPVSVDPLIKSNLAKVRKVFQLRADVDNEE----RATRDGEPAKRGVKKAILGVLPWGKAGWLHRRAMAQAKAHRGEVDVRITNRGVVEVSMDGRKVLSKGGPSFFGF-RRRDPSYGMWASSNGIEVARREAPSWSLVAAEDI 504 GS++ G +P D G+ IGP+P + ++ N ++ K+ + R+++ + +A R+G KR AI+ VLP+GK G+ RRA A+AH E +++TNRG +EVS+DG V K PS+ GF RR+DPS+ + + GIE+ RR W ++ AEDI Sbjct: 510 GSVVHAASVGRAPRDEEGREIGPVPQKLMTVLTPNEQQMSKIERNRSEIWAQRLERSKALREGHELKRSKMAAIMSVLPFGKNGFRRRRAREHAEAHLMEATLKLTNRGTLEVSIDGTIVQRKSRPSWLGFLRRKDPSFELRVTMEGIEIYRRGKLDW-VIKAEDI 674
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Match: D8LNC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC7_ECTSI) HSP 1 Score: 107 bits (268), Expect = 4.860e-24 Identity = 64/165 (38.79%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 25 SILLTRVAGDSPLDRNGKPIGPIPVSVDPLIKSNLAKVRKVFQLRADVDNEE----RATRDGEPAKRGVKKAILGVLPWGKAGWLHRRAMAQAKAHRGEVDVRITNRGVVEVSMDGRKVLSKGGPSFFGF-RRRDPSYGMWASSNGIEVARREAPSWSLVAAEDI 504 S++ AG + D G+ IGP+P + +I N ++ K+ + R+++ + +A R+G KR AI GVLP+GK G+ RR A+AH E +++TNRG +EVS+DG V K PS+FGF RR+DPS+ + + GIE+ RR W +V EDI Sbjct: 485 SVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAAREGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLMEATLKLTNRGNLEVSIDGTIVQRKSRPSWFGFLRRKDPSFELRVTMEGIEIYRRGKLDW-VVKVEDI 648
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Match: D7G9A5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A5_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 5.630e-23 Identity = 46/108 (42.59%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 175 EERATRDGEPAKRGVKKAILGVLPWGKAGWLHRRAMAQAKAHRGEVDVRITNRGVVEVSMDGRKVLSKGGPSFFGFRRRDPSYGMWASSNGIEVARREAPSWSLVAAE 498 +++A +G+ +RG ++G LP+GK G+L RRA A+AH GE + IT +G +EVS+DG VL K GPS+FGFRR D SY + + G++++RR W + A + Sbjct: 18 KKKAALEGQTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHVGEATLSITKKGGLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVDISRRGMYDWGIKAQD 125 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14968.3564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14968.3564.1 >prot_L-elsbetiae_contig14968.3564.1 ID=prot_L-elsbetiae_contig14968.3564.1|Name=mRNA_L-elsbetiae_contig14968.3564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp ISASDVDGSILLTRVAGDSPLDRNGKPIGPIPVSVDPLIKSNLAKVRKVFback to top mRNA from alignment at L-elsbetiae_contig14968:3402..4234- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14968.3564.1 ID=mRNA_L-elsbetiae_contig14968.3564.1|Name=mRNA_L-elsbetiae_contig14968.3564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=833bp|location=Sequence derived from alignment at L-elsbetiae_contig14968:3402..4234- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14968:3402..4234- >mRNA_L-elsbetiae_contig14968.3564.1 ID=mRNA_L-elsbetiae_contig14968.3564.1|Name=mRNA_L-elsbetiae_contig14968.3564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1026bp|location=Sequence derived from alignment at L-elsbetiae_contig14968:3402..4234- (Laminarionema elsbetiae ELsaHSoW15)back to top |