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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1435 |
| Cds size | 1050 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815260.2327187-UTR-L-elsbetiae_contig10312:206..238 | 1622815260.2327187-UTR-L-elsbetiae_contig10312:206..238 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10312 207..238 + |
| 1691682802.3180916-UTR-L-elsbetiae_contig10312:206..238 | 1691682802.3180916-UTR-L-elsbetiae_contig10312:206..238 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10312 207..238 + |
| 1622815260.2676969-UTR-L-elsbetiae_contig10312:1444..1797 | 1622815260.2676969-UTR-L-elsbetiae_contig10312:1444..1797 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10312 1445..1797 + |
| 1691682802.3511229-UTR-L-elsbetiae_contig10312:1444..1797 | 1691682802.3511229-UTR-L-elsbetiae_contig10312:1444..1797 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10312 1445..1797 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815260.2440858-CDS-L-elsbetiae_contig10312:238..372 | 1622815260.2440858-CDS-L-elsbetiae_contig10312:238..372 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10312 239..372 + |
| 1691682802.3283882-CDS-L-elsbetiae_contig10312:238..372 | 1691682802.3283882-CDS-L-elsbetiae_contig10312:238..372 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10312 239..372 + |
| 1622815260.2569833-CDS-L-elsbetiae_contig10312:528..1444 | 1622815260.2569833-CDS-L-elsbetiae_contig10312:528..1444 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10312 529..1444 + |
| 1691682802.339867-CDS-L-elsbetiae_contig10312:528..1444 | 1691682802.339867-CDS-L-elsbetiae_contig10312:528..1444 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10312 529..1444 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10312.356.1 >prot_L-elsbetiae_contig10312.356.1 ID=prot_L-elsbetiae_contig10312.356.1|Name=mRNA_L-elsbetiae_contig10312.356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=350bp
MDEPTEVVDRLDFVALTKAQRTMLVERVLDGGSINPVFQWWARVWTQRTF
VRADKKVTEETLARTGMNKILIQKAKAAVKELNRHKKSTDARLKPISILT
PELYMAVVQEQLKAEEAKKKEKRLEALAQSSDDDEDDACASDETLSDNSD
GSHSGAQEGAAAVDSGSVFGSREGGGGDNDQESVAAAVLGSESASQPPVV
VGEASAPGSNHQPGAEQLEYAEGEVVDFSGKGKKSSHKPDGIDAAAPGFE
SASQRAAVAGITAGSGPRPHNDNQAAGDEEDEAVGRSLPPSKKLRTSSPE
SSGGGGGVYQEAATAAESGSEFQRRAGVGPFVWASADQWQCGSDYLKQF* back to topmRNA from alignment at L-elsbetiae_contig10312:207..1797+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig10312.356.1 ID=mRNA_L-elsbetiae_contig10312.356.1|Name=mRNA_L-elsbetiae_contig10312.356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1591bp|location=Sequence derived from alignment at L-elsbetiae_contig10312:207..1797+ (Laminarionema elsbetiae ELsaHSoW15)
AGGTGTCCACAAGAAGCTTTGGTGAAGCTACCATGGACGAGCCAACGGAG
GTGGTCGACCGGTTGGATTTTGTCGCCTTGACCAAGGCGCAGCGTACCAT
GTTGGTCGAACGGGTTCTGGACGGGGGGAGTATTAATCCAGTGTTCCAGT
GGTGGGCACGTGTCTGGTGAGGAATGGATGCCGACATGTGACCATTTGTC
GACAAATGGATGCACACATTTATTTTTTCCGGACGCTAGATTCGACCCTA
GCTTGTTACCACACTCTGTACTGATGTTGCCACGTCGTTCGGCCTATGTT
TGACGGTCTGTGTCCGGGGAAGGACGCAACGTACGTTCGTTCGAGCGGAC
AAGAAGGTGACCGAGGAAACTCTGGCGAGAACGGGTATGAATAAGATCTT
GATACAGAAAGCGAAAGCAGCCGTGAAGGAGCTCAACCGCCACAAGAAAT
CTACCGATGCTCGTCTCAAGCCTATCAGCATACTGACGCCCGAGCTGTAT
ATGGCTGTGGTTCAGGAGCAACTCAAAGCCGAGGAGGCTAAGAAAAAAGA
GAAGAGACTTGAAGCGTTGGCACAGTCGTCCGATGATGACGAAGACGATG
CATGCGCCAGCGACGAGACACTTTCTGACAACAGCGATGGAAGCCACAGT
GGTGCACAGGAAGGGGCAGCTGCGGTGGATTCCGGGTCCGTGTTTGGGTC
TCGCGAAGGTGGTGGCGGTGATAATGATCAGGAGAGCGTCGCTGCGGCGG
TGCTCGGGTCCGAGTCAGCGTCTCAGCCGCCGGTTGTGGTGGGGGAGGCG
TCTGCGCCTGGTTCTAACCACCAACCCGGTGCCGAGCAGCTGGAATATGC
TGAGGGCGAGGTGGTTGATTTTTCTGGCAAAGGGAAGAAGTCCTCCCACA
AACCCGATGGGATCGATGCGGCGGCGCCCGGGTTCGAGTCAGCGTCTCAG
CGGGCGGCTGTGGCCGGGATTACGGCTGGGTCTGGGCCTAGGCCTCACAA
TGATAATCAGGCGGCGGGTGATGAGGAGGACGAGGCAGTAGGTCGATCTC
TGCCACCGAGCAAGAAACTACGGACGTCTTCCCCCGAAAGCAGTGGTGGT
GGTGGCGGTGTGTATCAAGAGGCGGCCACTGCGGCGGAGTCTGGGTCAGA
GTTTCAGCGGCGGGCTGGGGTTGGGCCTTTTGTCTGGGCGTCAGCAGACC
AGTGGCAATGCGGAAGTGACTACCTCAAGCAATTCTGATGCAACTACTGA
CGAGGACACCACGCAGGATCCACGAGTTGCGAAAGCGGTGGATGATATTC
GTTCTTTTGTTGGCCGCGAATGGAGGTGGGTGATTGCTTGCTTACACGTT
ACATATTCACAGCTTGGATCGTTGAGACTCACTGATGGATCAATTGACGA
ATCCAACACATAGATGTACACAAGCTCTCACTTCGCACCACTGCTTGTGC
AGGCTGCCGGTGTGATATTTTCATTCAGCAACGAGCGGAGGCGAACTGAA
GATATAGTTGTTTTTGAAGGGGTTGCCACTGAGTTCGTATGTATGTGTCC
ATCAAGTACGTCATCATTCGAATACATGTCATATGTACGGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig10312:207..1797+ >mRNA_L-elsbetiae_contig10312.356.1 ID=mRNA_L-elsbetiae_contig10312.356.1|Name=mRNA_L-elsbetiae_contig10312.356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2100bp|location=Sequence derived from alignment at L-elsbetiae_contig10312:207..1797+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGAGCCAACGGAGGTGGTCGACCGGTTGGATTTTGTCGCCTTGAC
CAAGGCGCAGCGTACCATGTTGGTCGAACGGGTTCTGGACGGGGGGAGTA
TTAATCCAGTGTTCCAGTGGTGGGCACGTGTCTGATGGACGAGCCAACGG
AGGTGGTCGACCGGTTGGATTTTGTCGCCTTGACCAAGGCGCAGCGTACC
ATGTTGGTCGAACGGGTTCTGGACGGGGGGAGTATTAATCCAGTGTTCCA
GTGGTGGGCACGTGTCTGGACGCAACGTACGTTCGTTCGAGCGGACAAGA
AGGTGACCGAGGAAACTCTGGCGAGAACGGGTATGAATAAGATCTTGATA
CAGAAAGCGAAAGCAGCCGTGAAGGAGCTCAACCGCCACAAGAAATCTAC
CGATGCTCGTCTCAAGCCTATCAGCATACTGACGCCCGAGCTGTATATGG
CTGTGGTTCAGGAGCAACTCAAAGCCGAGGAGGCTAAGAAAAAAGAGAAG
AGACTTGAAGCGTTGGCACAGTCGTCCGATGATGACGAAGACGATGCATG
CGCCAGCGACGAGACACTTTCTGACAACAGCGATGGAAGCCACAGTGGTG
CACAGGAAGGGGCAGCTGCGGTGGATTCCGGGTCCGTGTTTGGGTCTCGC
GAAGGTGGTGGCGGTGATAATGATCAGGAGAGCGTCGCTGCGGCGGTGCT
CGGGTCCGAGTCAGCGTCTCAGCCGCCGGTTGTGGTGGGGGAGGCGTCTG
CGCCTGGTTCTAACCACCAACCCGGTGCCGAGCAGCTGGAATATGCTGAG
GGCGAGGTGGTTGATTTTTCTGGCAAAGGGAAGAAGTCCTCCCACAAACC
CGATGGGATCGATGCGGCGGCGCCCGGGTTCGAGTCAGCGTCTCAGCGGG
CGGCTGTGGCCGGGATTACGGCTGGGTCTGGGCCTAGGCCTCACAATGAT
AATCAGGCGGCGGGTGATGAGGAGGACGAGGCAGTAGGTCGATCTCTGCC
ACCGAGCAAGAAACTACGGACGTCTTCCCCCGAAAGCAGTGGTGGTGGTG
GCGGTGTGTATCAAGAGGCGGCCACTGCGGCGGAGTCTGGGTCAGAGTTT
CAGCGGCGGGCTGGGGTTGGGCCTTTTGTCTGGGCGTCAGCAGACCAGTG
GCAATGCGGAAGTGACTACCTCAAGCAATTCTGAGACGCAACGTACGTTC
GTTCGAGCGGACAAGAAGGTGACCGAGGAAACTCTGGCGAGAACGGGTAT
GAATAAGATCTTGATACAGAAAGCGAAAGCAGCCGTGAAGGAGCTCAACC
GCCACAAGAAATCTACCGATGCTCGTCTCAAGCCTATCAGCATACTGACG
CCCGAGCTGTATATGGCTGTGGTTCAGGAGCAACTCAAAGCCGAGGAGGC
TAAGAAAAAAGAGAAGAGACTTGAAGCGTTGGCACAGTCGTCCGATGATG
ACGAAGACGATGCATGCGCCAGCGACGAGACACTTTCTGACAACAGCGAT
GGAAGCCACAGTGGTGCACAGGAAGGGGCAGCTGCGGTGGATTCCGGGTC
CGTGTTTGGGTCTCGCGAAGGTGGTGGCGGTGATAATGATCAGGAGAGCG
TCGCTGCGGCGGTGCTCGGGTCCGAGTCAGCGTCTCAGCCGCCGGTTGTG
GTGGGGGAGGCGTCTGCGCCTGGTTCTAACCACCAACCCGGTGCCGAGCA
GCTGGAATATGCTGAGGGCGAGGTGGTTGATTTTTCTGGCAAAGGGAAGA
AGTCCTCCCACAAACCCGATGGGATCGATGCGGCGGCGCCCGGGTTCGAG
TCAGCGTCTCAGCGGGCGGCTGTGGCCGGGATTACGGCTGGGTCTGGGCC
TAGGCCTCACAATGATAATCAGGCGGCGGGTGATGAGGAGGACGAGGCAG
TAGGTCGATCTCTGCCACCGAGCAAGAAACTACGGACGTCTTCCCCCGAA
AGCAGTGGTGGTGGTGGCGGTGTGTATCAAGAGGCGGCCACTGCGGCGGA
GTCTGGGTCAGAGTTTCAGCGGCGGGCTGGGGTTGGGCCTTTTGTCTGGG
CGTCAGCAGACCAGTGGCAATGCGGAAGTGACTACCTCAAGCAATTCTGA back to top
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