prot_L-elsbetiae_contig1495.3557.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1495.3557.1
Unique Nameprot_L-elsbetiae_contig1495.3557.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length191
Homology
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BLAST of mRNA_L-elsbetiae_contig1495.3557.1 vs. uniprot
Match: D7FQ77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ77_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 2.150e-114
Identity = 165/188 (87.77%), Postives = 174/188 (92.55%), Query Frame = 0 
Query:    1 MGEAKTPEEVYRRLSGDGGRKAAPRLPPPLVPVDFGYWKLAPAGLGLLGLGVYAGFRKQIKADAVGAEALARQGLEPLPFSPHRLATRALMYGTALSVGCFSAGILVVGYSMGVTNLREFNDKMKVWAPEQMHRLGFRHRPEYIRDREAMRGMTYDEEWEYVDKLLEKEEPGLSVAES---PPPEGEG 185
            M EAK PE ++RR SGDGGR A  RLPPPL+PVDFGYWKLAPAGLGLLGLGVYAGFRKQIKADAVGAEALA+QGLEPLPFSPHRLATRALMYGTALSVGCFSAG+LVVGYSMGVTNLREFNDKMKVWAPEQMHRLGFRHRPEYIRDREAMRGMTYDEEWEYVD+LLEKEEPG + A+S   PP + EG
Sbjct:    1 MAEAKKPEGLHRRFSGDGGRIADSRLPPPLIPVDFGYWKLAPAGLGLLGLGVYAGFRKQIKADAVGAEALAKQGLEPLPFSPHRLATRALMYGTALSVGCFSAGVLVVGYSMGVTNLREFNDKMKVWAPEQMHRLGFRHRPEYIRDREAMRGMTYDEEWEYVDRLLEKEEPGFAGADSAECPPAKSEG 188
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1495.3557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ77_ECTSI2.150e-11487.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..88
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 92..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1495contigL-elsbetiae_contig1495:5546..12647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1495.3557.1mRNA_L-elsbetiae_contig1495.3557.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1495 5546..12647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1495.3557.1 ID=prot_L-elsbetiae_contig1495.3557.1|Name=mRNA_L-elsbetiae_contig1495.3557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=191bp
MGEAKTPEEVYRRLSGDGGRKAAPRLPPPLVPVDFGYWKLAPAGLGLLGL
GVYAGFRKQIKADAVGAEALARQGLEPLPFSPHRLATRALMYGTALSVGC
FSAGILVVGYSMGVTNLREFNDKMKVWAPEQMHRLGFRHRPEYIRDREAM
RGMTYDEEWEYVDKLLEKEEPGLSVAESPPPEGEGGGAVI*
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