mRNA_L-elsbetiae_contig1031.354.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Match: D8LMA2_ECTSI (COX4 neighbour n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA2_ECTSI) HSP 1 Score: 174 bits (440), Expect = 1.560e-52 Identity = 87/130 (66.92%), Postives = 107/130 (82.31%), Query Frame = 1 Query: 67 MTNASVSVECPAYVKMMLHAAKYPWAAVNGFLIGEGDSAAGEICVKDAVPLFHTSTLAPLLETSASMVEAHAASNGLSIVGFYQANQCVDDNVPGVLSSKIMGRIDLAREGSSVLLAVSNKRLEAKEDSA 456 M++ +V+VE AY+K+MLHAAKYPWAAVNGFL+GE + G++ VKDAVPLFHTSTLAPLLETSA MV+AHAA +GL IVGFYQANQC+DDN PG L++++M +ID G SVL+ +SNKRLE DSA Sbjct: 1 MSSFNVNVEEAAYLKLMLHAAKYPWAAVNGFLLGE-EGLTGQVSVKDAVPLFHTSTLAPLLETSAVMVDAHAARSGLCIVGFYQANQCLDDNAPGALATEVMNKIDSTHAGPSVLVVISNKRLETAGDSA 129
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Match: A0A4X2LVY6_VOMUR (ER membrane protein complex subunit 9 n=7 Tax=Metatheria TaxID=9263 RepID=A0A4X2LVY6_VOMUR) HSP 1 Score: 98.2 bits (243), Expect = 3.380e-22 Identity = 54/129 (41.86%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 52 PTMTAMTNASVSVECPAYVKMMLHAAKYPWAAVNGFLIGEGDSAAGEICVKDAVPLFHTS-TLAPLLETSASMVEAHAASNGLSIVGFYQANQCVDDNVPGVLSSKIMGRIDLAREGSSVLLAVSNKRL 435 P+ T T V + AYVKM LHAA+YP AAVNG L+ + A G +C+ D VPLFH+ L+ +LE + + V+ A L + G+Y AN ++D PG L+ KI GRI G+ VL+ + N++L Sbjct: 43 PSHTPRTMGEVEISARAYVKMCLHAARYPHAAVNGLLLAQAPQAGGCLCLSDCVPLFHSHLALSVMLEVALNQVDVWGAQGSLVVAGYYHANASMNDQSPGPLALKIAGRIAEFFPGA-VLIMLDNRKL 170
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Match: A0A2B4SL51_STYPI (ER membrane protein complex subunit 8 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SL51_STYPI) HSP 1 Score: 95.5 bits (236), Expect = 1.120e-21 Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 82 VSVECPAYVKMMLHAAKYPWAAVNGFLIGEGDSAAGEICVKDAVPLFHTST-LAPLLETSASMVEAHAASNGLSIVGFYQANQCVDDNVPGVLSSKIMGRIDLAREGSSVLLAVSNKRL 435 + V AY K++LH +KYP AVNG L+GE + GEI DA+PLFH + LAP+LE + + V+ H NGL IVG+YQAN+ ++DN P + KI +I + +L V N +L Sbjct: 3 IQVSPRAYAKILLHTSKYPHKAVNGVLVGEENLKEGEIYALDAIPLFHIALGLAPMLEVALARVDIHCKENGLQIVGYYQANEHINDNSPNAICYKIGEKI-CDHFNNGFMLMVDNTKL 120
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Match: UPI001B34AAAD (ER membrane protein complex subunit 9 n=2 Tax=Ochotona TaxID=9977 RepID=UPI001B34AAAD) HSP 1 Score: 94.0 bits (232), Expect = 5.150e-21 Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 82 VSVECPAYVKMMLHAAKYPWAAVNGFLIGEGDSAAGEICVKDAVPLFHTS-TLAPLLETSASMVEAHAASNGLSIVGFYQANQCVDDNVPGVLSSKIMGRI-DLAREGSSVLLAVSNKRL 435 V + AYVKM LHAA+YP AAVNG L+ + +C+ D VPLFH+ LA +LE + + V+ A GL + G+Y AN VDD PG L+ KI GRI +L E +VL+ + N++L Sbjct: 4 VEISARAYVKMCLHAARYPHAAVNGLLLASSPRSGECLCLTDCVPLFHSHLALAVMLEVALNQVDVWGAQAGLVVAGYYHANASVDDQSPGPLALKIAGRIAELVPE--AVLIMLDNQKL 121
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Match: G1SIG8_RABIT (ER membrane protein complex subunit 9 n=4 Tax=Glires TaxID=314147 RepID=G1SIG8_RABIT) HSP 1 Score: 93.6 bits (231), Expect = 7.580e-21 Identity = 53/119 (44.54%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 82 VSVECPAYVKMMLHAAKYPWAAVNGFLIGEGDSAAGEICVKDAVPLFHTS-TLAPLLETSASMVEAHAASNGLSIVGFYQANQCVDDNVPGVLSSKIMGRIDLAREGSSVLLAVSNKRL 435 V + AYVKM LHAA+YP AAVNG L+ SA +C+ D VPLFH+ LA +LE + + V+ A GL + G+Y AN +DD PG L+ KI GRI ++VL+ + N++L Sbjct: 4 VEISARAYVKMCLHAARYPHAAVNGLLLAPSPSAGECLCLTDCVPLFHSHLALAVMLEVALNQVDVWGARAGLVVAGYYHANAALDDQSPGPLALKIAGRI-AELFPAAVLVMLDNQKL 121
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Match: UPI000A2A7D06 (ER membrane protein complex subunit 8 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7D06) HSP 1 Score: 92.0 bits (227), Expect = 2.330e-20 Identity = 52/123 (42.28%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 88 VECPAYVKMMLHAAKYPWAAVNGFLIGEGDSAAGEICVKDAVPLFHTST-LAPLLETSASMVEAHAASNGLSIVGFYQANQCVDDNVPGVLSSKIMGRI-DLAREGSSVLLAVSNKRLEAKED 450 + AY KM+LHAAKYP AVNG L+GE E+ +DA+PLFH LAP+LE + + V+++ ++GL IVG++QAN+ +D+N P ++ KI +I D G LL + N +L D Sbjct: 5 ISAKAYTKMLLHAAKYPHKAVNGVLLGEESIQDSEVYAQDAIPLFHQCLGLAPMLEVALNQVDSYCKASGLQIVGYFQANEHIDNNSPDGIAYKIGEKITDHCANGC--LLMIDNTKLSVSCD 125
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Match: UPI0009E44B74 (ER membrane protein complex subunit 8-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E44B74) HSP 1 Score: 92.0 bits (227), Expect = 2.440e-20 Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 100 AYVKMMLHAAKYPWAAVNGFLIGEGDSAAGEICVKDAVPLFHTST-LAPLLETSASMVEAHAASNGLSIVGFYQANQCVDDNVPGVLSSKIMGRIDLAREGSSVLLAVSNKRL 435 AY K++LH +KYP AVNG L+G+ + GEI V DA+PLFH LAP+LE + + V+ H +GL IVG+YQAN+ ++DN P + KI +I + + +L V N +L Sbjct: 9 AYAKILLHTSKYPHKAVNGVLLGDENLQDGEIYVLDAIPLFHICLGLAPMLEVALARVDIHCKESGLQIVGYYQANEHINDNSPNAICYKIGEKI-CDQFNNGFILMVDNTKL 120
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Match: UPI001F0441C5 (ER membrane protein complex subunit 8-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0441C5) HSP 1 Score: 92.0 bits (227), Expect = 2.490e-20 Identity = 49/119 (41.18%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 82 VSVECPAYVKMMLHAAKYPWAAVNGFLIGEGDSAAGEICVKDAVPLFHTST-LAPLLETSASMVEAHAASNGLSIVGFYQANQCVDDNVPGVLSSKIMGRIDLAREGSSVLLAVSNKRL 435 V++ AY K++LHA KYP AV G ++ G + + V DA+P+FH L P++E + + V+++ SNGL +VG+YQANQC+DDN P V + KI +I L S+ +L V N ++ Sbjct: 3 VTLSTQAYSKILLHACKYPHKAVCGVVLA-GKNCVSNVEVTDAIPMFHLGLGLVPMMEVALTQVDSYCKSNGLQVVGYYQANQCLDDNSPDVFTYKIAEKI-LENFSSAFILMVDNTKM 119
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Match: A0A6S7IEJ3_PARCT (MPN domain-containing protein n=3 Tax=Alcyonacea TaxID=40677 RepID=A0A6S7IEJ3_PARCT) HSP 1 Score: 92.8 bits (229), Expect = 2.750e-20 Identity = 53/119 (44.54%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 82 VSVECPAYVKMMLHAAKYPWAAVNGFLIGEGDSAAGEICVKDAVPLFHTST-LAPLLETSASMVEAHAASNGLSIVGFYQANQCVDDNVPGVLSSKIMGRIDLAREGSSVLLAVSNKRL 435 V++ AY K++LHA+KYP AV G +I +S + +I V DAVPLFH S LAP++E + + V+A+ SN L +VG+YQANQC+D+N P V + KI ++ S+ +L V NK++ Sbjct: 40 VTISSRAYSKILLHASKYPHKAVCGVVIARENSDS-KIDVLDAVPLFHLSLGLAPMMEVALTQVDAYCKSNKLQVVGYYQANQCLDNNSPDVYAYKITEKLQ-ENFNSAFILMVDNKKM 156
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Match: A0A3M6UC68_POCDA (MPN domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UC68_POCDA) HSP 1 Score: 91.3 bits (225), Expect = 4.720e-20 Identity = 52/119 (43.70%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 82 VSVECPAYVKMMLHAAKYPWAAVNGFLIGEGDSAAGEICVKDAVPLFH-TSTLAPLLETSASMVEAHAASNGLSIVGFYQANQCVDDNVPGVLSSKIMGRIDLAREGSSVLLAVSNKRL 435 V + AY K++LH AKYP AVNG L+G + GEI DA+PLFH T LAP+LE + + V+ H N L IVG+YQAN+ ++DN P + KI +I + + +L V N +L Sbjct: 3 VRLSLRAYAKILLHTAKYPHKAVNGVLLGVENPKDGEIYALDAIPLFHITLGLAPMLEVALARVDIHCKKNELQIVGYYQANEHINDNSPNAICYKIGEKI-CDQFNNGFMLMVDNTKL 120 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1031.354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1031.354.1 >prot_L-elsbetiae_contig1031.354.1 ID=prot_L-elsbetiae_contig1031.354.1|Name=mRNA_L-elsbetiae_contig1031.354.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp DHEHRSVPVSVSLSGSLPTMTAMTNASVSVECPAYVKMMLHAAKYPWAAVback to top mRNA from alignment at L-elsbetiae_contig1031:1222..4884+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1031.354.1 ID=mRNA_L-elsbetiae_contig1031.354.1|Name=mRNA_L-elsbetiae_contig1031.354.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3663bp|location=Sequence derived from alignment at L-elsbetiae_contig1031:1222..4884+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1031:1222..4884+ >mRNA_L-elsbetiae_contig1031.354.1 ID=mRNA_L-elsbetiae_contig1031.354.1|Name=mRNA_L-elsbetiae_contig1031.354.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=912bp|location=Sequence derived from alignment at L-elsbetiae_contig1031:1222..4884+ (Laminarionema elsbetiae ELsaHSoW15)back to top |