mRNA_L-elsbetiae_contig1488.3520.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Match: A0A6H5KG61_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG61_9PHAE) HSP 1 Score: 573 bits (1478), Expect = 5.760e-200 Identity = 271/349 (77.65%), Postives = 296/349 (84.81%), Query Frame = 1 Query: 118 MAPHSAGVLAGESVDPLSTEQRLLVPGKDPWWALRDHPPPSPRMVRLCPHLWQAWVVGLVAGSALLLEHDIWIYAGFVMAVFLATVFIPDSGDSGAPYFMHLAIPFFVVKGVQEGGAWTAIGFYWAFIFLPFADFVVGVDTFNKRDNEYKVLRDRKSFHLASWIFLPAQLALLAYACHAVNTIPLGPFEFFGFVVSVAVYTGGLGITLSHELVHKSNRLEQWLGRAMCVIISYGHFYVEHNRGHHKAVATDQDPATARFGESFYAFLPRCVGGSFVSAWRLEIDRLRDRNLPFYNNEMLWYWLASATLCALLTLVFGPKTVPLFLGQSFVGILFFESVNYVEHYGVRER 1164 MAPHS + + + ++ VPG D WWALRD+PPP P RLCP LWQAWV GL+AGS LLE DIW+Y GFV ++FL T IPDSGDS +PYFMHLAIPFF VKGV EGG WTAI FYWAF FLPFADFVVGVDTFNKRD EYKVLR+RK F +ASWIFLPAQLALLAYACHAVNTIPL P EF GFVVSVAVYTGG+GITLSHELVHKSNR+EQWLGRAMCV+ISYGHFYVEHNRGHHK VATD+DPATARFGESFYAFLPRCV GSF SAWRLE DRLRDRNLPFY+NEMLWYW+AS+ LCALLT +FGP TVPLF+GQS +GI FFESVNYVEHYG+ + Sbjct: 1 MAPHSE--VTRDRQQNEAKKRSKEVPGTD-WWALRDYPPPDPGTARLCPRLWQAWVAGLIAGSMFLLEFDIWVYVGFVASLFLGTAVIPDSGDSPSPYFMHLAIPFFAVKGVHEGGGWTAISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPAQLALLAYACHAVNTIPLTPLEFLGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFASAWRLETDRLRDRNLPFYHNEMLWYWVASSCLCALLTAMFGPLTVPLFVGQSLIGIFFFESVNYVEHYGLERK 346
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Match: A0A836CE88_9STRA (Fatty acid desaturase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE88_9STRA) HSP 1 Score: 292 bits (747), Expect = 6.150e-87 Identity = 144/303 (47.52%), Postives = 192/303 (63.37%), Query Frame = 1 Query: 256 LCPHLWQAWVVGLVAGSALLLEHDIWIYAGFVMAVFLATVFIPDSGDSGAPYFMHLAIPFFVVKGVQEGGAWTAIGFYWAFIFLPFADFVVGVDTFNKRDNEYKVLRDRKSFHLASWIFLPAQLALLAYACHAVNTIPLGPFEFFGFVVSVAVYTGGLGITLSHELVHKSNRLEQWLGRAMCVIISYGHFYVEHNRGHHKAVATDQDPATARFGESFYAFLPRCVGGSFVSAWRLEIDRLRDRNLPFYNNEMLWYWLASATLCALLTLVFGPKTVPLFLGQSFVGILFFESVNYVEHYGVRER 1164 LC W AW V ++ G ALL W YA FV A F + IPD G + P + HL +P KG+ GGAW YWAF+ LP D +VGVDTFN Y L +R++F + + IF ++ALL ++ V T L E G+ VSV VY GG GI ++HEL+H++ + E+ LGR + ++ YGHF VEHN GHH+ VAT +DPATARFGESF++FLPRCV SF SA +E RLR LP+++NE+ Y + SAT+ L+ +FG + +FLGQS +GI+ FESVNY+EHYG+ R Sbjct: 265 LCSLAWLAWAVAVIGGCALLFHLPPWQYAAFVTAAFALSAAIPDPGTAPWPTYAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHHNEVYRYGVVSATVAVLVAALFGRAALYMFLGQSLMGIILFESVNYLEHYGLERR 567
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Match: A0A6I7QZ28_9BACT (Alkane 1-monooxygenase n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A6I7QZ28_9BACT) HSP 1 Score: 204 bits (519), Expect = 3.920e-57 Identity = 106/247 (42.91%), Postives = 157/247 (63.56%), Query Frame = 1 Query: 448 GVQEGGAWTAIGFYWAFIFLPFADFVVGVDTFNKRDNEYKVLRDRKSFH--LASWIFLPAQLALLAYACHAVNTIPLGPFEFFGFVVSVAVYTGGLGITLSHELVHKSNRLEQWLGRAMCVIISYGHFYVEHNRGHHKAVATDQDPATARFGESFYAFLPRCVGGSFVSAWRLEIDRLRDRNL-PF-YNNEMLWYWLASATLCALLTLVFG------PKTVP-LFLGQSFVGILFFESVNYVEHYGV 1155 G++ GG +T +GF +AF LP D +VG D+ N +E V + K F+ ++++ Q+ ++ ++C+ V + FE+ GF++S+ TGG+GIT++HEL HK+ ++EQ+ + + + +SY HF+VEHNRGHH VAT +DPATA++GESFY F PR V GS+ SAW++E RLR + L PF +N M+WY + CA LT +F +P LF QSFV I E VNY+EHYG+ Sbjct: 22 GMKAGGGYTYMGFLFAFFVLPALDLLVGKDSENV--DEGSVSEESKKFYYRFITYLWAYIQVFVVIFSCYQVTQLNYNLFEWTGFILSLGTMTGGIGITVAHELGHKNTKIEQFYSKVLLMTVSYMHFFVEHNRGHHVHVATPKDPATAKYGESFYRFWPRTVFGSYFSAWKIENKRLRKKGLSPFSISNSMIWYTILPFVFCAALTTLFSFLSGTFQWAIPILFFSQSFVAITLLELVNYIEHYGI 266
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Match: A0A1I2BKE7_9BACT (Alkane 1-monooxygenase n=1 Tax=Thermoflexibacter ruber TaxID=1003 RepID=A0A1I2BKE7_9BACT) HSP 1 Score: 200 bits (508), Expect = 1.410e-55 Identity = 101/258 (39.15%), Postives = 151/258 (58.53%), Query Frame = 1 Query: 409 YFMHLAIPFFVVKGVQEGGAWTAIGFYWAFIFLPFADFVVGVDTFNKRDNEYKVLRDRKSFHLASWIFLPAQLALLAYACHAVNTIPLGPFEFFGFVVSVAVYTGGLGITLSHELVHKSNRLEQWLGRAMCVIISYGHFYVEHNRGHHKAVATDQDPATARFGESFYAFLPRCVGGSFVSAWRLEIDRLRDRNLPFYN--NEMLWYWLASATLCALLTLVFG-PKTVPL------FLGQSFVGILFFESVNYVEHYGV 1155 +F IP V+ G GGAW + F+ +P D +VG D N D + + + ++++ QLA LA+ C+ + + E+ GF++ + TGG+GIT++HEL HK ++LE++ + + + Y HFY+EHNRGHH V T +DPAT+R GE+FYAF R V S++SAWRLE +R+ + L ++ N+M+W+ L LCA+LT VF PK V L F QS +G E+VNY+EHYG+ Sbjct: 9 FFSAFIIPALVIAGYYLGGAWNFSTVVFVFVLIPIIDQIVGKDAENVEDRVVSQVAEEFYYRFILYVWVYVQLAFLAWGCYVIAQQNMTSLEYIGFILGFPLVTGGIGITVAHELGHKKSKLERFYAKVLLMTTCYMHFYIEHNRGHHVHVGTPKDPATSRRGENFYAFWVRTVRDSYLSAWRLEFERMSRKGLSKFSLQNDMIWFTLLPILLCAVLTAVFSLPKGVILWDIPIFFFIQSILGFSLLEAVNYIEHYGI 266
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Match: UPI001A095F64 (Alkane 1-monooxygenase n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI001A095F64) HSP 1 Score: 198 bits (503), Expect = 1.150e-54 Identity = 100/259 (38.61%), Postives = 149/259 (57.53%), Query Frame = 1 Query: 394 DSGAPYFMHLAIPFFVVKGVQEGGAWTAIGFYWAFIFLPFADFVVGVDTFNKRDNEYKVLRDRKSFHLASWIFLPAQLALLAYACHAVNTIPLGPFEFFGFVVSVAVYTGGLGITLSHELVHKSNRLEQWLGRAMCVIISYGHFYVEHNRGHHKAVATDQDPATARFGESFYAFLPRCVGGSFVSAWRLEIDRLRDRNLPFYN--NEMLWYWLASATLCALLTLVFGPKTVPLFLGQSFVGILFFESVNYVEHYGVRER 1164 +S P+ + +P V G +GG + + F+ +P D ++G T+N +E L KSF L +W +P L L+ + A++ +PL E G S+ + TGG+GI L+HEL+HK R E+ +G+ + + +SY HFY+EH GHH+ V+T +DPA+AR GES Y F R V GS+ SAW++E RL+ + L ++ N MLW+ L A LT+ FGP + F+ QS V E VNYVEHYG+ + Sbjct: 9 NSPLPFLITYTVPLLAVWGFIQGGWFNFAVPVYIFVLVPLLDALLGTYTYNPTQDETSRLTANKSFSLIAWPHVPLLLGLVIWGAWALSHLPLSTVEIIGLTCSIGLCTGGIGINLAHELIHKPTRHERLMGQILLLNVSYMHFYIEHLFGHHRNVSTPEDPASARLGESLYRFYFRSVFGSYRSAWQIESKRLQKKGLGLWSHHNRMLWFALWPALYATGLTVFFGPAALGFFIAQSIVAFSLLEGVNYVEHYGLERK 267
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Match: A0A7Y7BGN3_9BACT (Alkane 1-monooxygenase n=2 Tax=Cytophagia bacterium TaxID=2026730 RepID=A0A7Y7BGN3_9BACT) HSP 1 Score: 197 bits (501), Expect = 1.560e-54 Identity = 101/258 (39.15%), Postives = 153/258 (59.30%), Query Frame = 1 Query: 409 YFMHLAIPFFVVKGVQEGGAWTAIGFYWAFIFLPFADFVVGVDTFNKRDNEYKVLRDRKSFHLASWIFLPAQLALLAYACHAVNTIPLGPFEFFGFVVSVAVYTGGLGITLSHELVHKSNRLEQWLGRAMCVIISYGHFYVEHNRGHHKAVATDQDPATARFGESFYAFLPRCVGGSFVSAWRLEIDRLRDRNLPF--YNNEMLWYWLASATLCALLT----LVFGPKT---VPLFLGQSFVGILFFESVNYVEHYGV 1155 + IP + G GG W + + FI +P AD+++G D N ++E ++ ++ + ++I+ Q+A L + + T+PL E+ GFVVS A+ TGG+GIT++HEL HK ++LE++ + + + + Y HFY+EHNRGHH VAT +DPAT+R E+F F R V GS+ SAWRLE +RLR R L ++N+M+W+ L LC +LT L+ G T + F QS + E VNY+EHYG+ Sbjct: 9 FLTAFVIPSLTILGFYLGGYWNYLTILFVFIIIPLADYLIGEDPENLSEDESMLIAEQFYYRFITFIWAFFQVAFLIWGVWMIATVPLTVTEWIGFVVSFALVTGGIGITVAHELGHKKSKLERFYAKLLLMTVCYMHFYIEHNRGHHVYVATPRDPATSRKNEAFPKFWVRSVFGSYFSAWRLEKERLRKRKLGIWSFDNQMIWFSLLPIVLCGVLTTGMSLIVGAFTWQVIAFFFAQSILAFTLLELVNYIEHYGI 266
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Match: A0A6C1P169_9BACT (Alkane 1-monooxygenase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6C1P169_9BACT) HSP 1 Score: 196 bits (497), Expect = 4.200e-54 Identity = 101/269 (37.55%), Postives = 147/269 (54.65%), Query Frame = 1 Query: 409 YFMHLAIPFFVVKGVQEGGAWTAIGFYWAFIFLPFADFVVGVDTFNKRDNEYKVLRDRKSFHLASWIFLPAQLALLAYACHAVNTIPLGPFEFFGFVVSVAVYTGGLGITLSHELVHKSNRLEQWLGRAMCVIISYGHFYVEHNRGHHKAVATDQDPATARFGESFYAFLPRCVGGSFVSAWRLEIDRLRDRNLPFY--NNEMLWYWLASATLCALLTLVFGPKTVPLFLGQSFVGILFFESVNYVEHYGVRERTARE*MTGLKQKAGH 1209 Y +P V+ G+ GG WT + + F+ LP +F VG + N K ++ + + W ++P Q L YA A+ T L +E G ++S+ + GG+GIT++HEL+H+S+R EQ LGR + + Y HF +EH RGHH VAT DPATA G SFY + R + ++SAWRLE RL+ R LP + +NEMLW+ A L+ +FGP FL V E+VNY+EHYG+ ++ + G +K H Sbjct: 6 YTPSYTVPASVIAGITLGGFWTWLTPVYIFMLLPLFEFAVGRNPLNLDPESEKKAKEERLYSWLLWSYIPLQAGLTIYAIWAITTGTLAGYEIAGIILSLGISNGGVGITVAHELIHRSSRFEQILGRILLMTTWYMHFAIEHVRGHHVHVATADDPATAPLGTSFYRYWVRTIPEQWISAWRLEKKRLKKRKLPVFGIHNEMLWFLAAQTGFTVLIGFLFGPAGAGAFLLSCVVAFSLLEAVNYLEHYGLERKSGAD---GKPEKVSH 271
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Match: A0A3A4JVY7_9DELT (Alkane 1-monooxygenase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3A4JVY7_9DELT) HSP 1 Score: 196 bits (497), Expect = 1.320e-53 Identity = 105/243 (43.21%), Postives = 142/243 (58.44%), Query Frame = 1 Query: 442 VKGVQEGGAWTAIGFYWAFIFLPFADFVVGVDTFNKRDNEYKVLRDRKSFHLASWIFLPAQLALLAYACHAVNTIPLGPFEFFGFVVSVAVYTGGLGITLSHELVHKSNRLEQWLGRAMCVIISYGHFYVEHNRGHHKAVATDQDPATARFGESFYAFLPRCVGGSFVSAWRLEIDRLRDRNLPFY--NNEMLWYWLASATLCALLTLVFGPKTVPLFLGQSFVGILFFESVNYVEHYGVRER 1164 + G GG T + + AF+ +P DFV+G +T N E L + + F L +WI P Q+AL+ + T L E G VSV + G +GI +SHEL+H+ E +LG+AM +SY H+ +EH GHH+ VAT QDPATAR+GES YAFLPR + SF+SAW +E RL+ + L Y +N +L Y A+A L L L++G V FL QS V I E VNY+EHYG+ R Sbjct: 49 LAGYALGGWLTFLTVFIAFVVVPLFDFVLGANTLNPTPEEEATLDEARDFKLLTWIAAPVQVALMFWGAWVAGTKNLSWVETAGLTVSVGIVGGAMGINVSHELIHRYRPFETFLGKAMLWSVSYLHWSIEHVAGHHRRVATPQDPATARYGESVYAFLPRTIIDSFISAWTIERHRLKKKGLAEYGFHNRILRYLAATAALAVGLGLLWGAAAVAFFLVQSLVAITLLEIVNYIEHYGLLRR 291
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Match: UPI00042A423E (alkane 1-monooxygenase n=1 Tax=Hugenholtzia roseola TaxID=1002 RepID=UPI00042A423E) HSP 1 Score: 192 bits (487), Expect = 1.680e-52 Identity = 97/263 (36.88%), Postives = 156/263 (59.32%), Query Frame = 1 Query: 409 YFMHLAIPFFVVKGVQEGGAWTAIGFYWAFIFLPFADFVVGVDTFNKRDNEYKVLRDRKSFHLASWIFLPAQLALLAYACHAVNTIPLGPFEFFGFVVSVAVYTGGLGITLSHELVHKSNRLEQWLGRAMCVIISYGHFYVEHNRGHHKAVATDQDPATARFGESFYAFLPRCVGGSFVSAWRLEIDRLRDRNLPFYNNEMLWYW----LASATLCALLTLVFGPKT--VPLF-LGQSFVGILFFESVNYVEHYGVRERTARE 1176 +F+ +P F + G GGA + ++ F+ +P D+++G DT N + K ++K + ++I++ Q A+L +AC+ + P GF + +A GG+GIT++HEL HK+ ++EQ+ + + + +SY HF++EHN+GHH VAT DPA++R E+ YAF R V G + SAW++E DRL LPFY N+ML+Y L +A+L A+ + + G VPLF + QS + E VNY+EHYG++ + E Sbjct: 10 FFLAFLLPLFSILGYYVGGAANWLTVFFVFVLIPLFDYLIGKDTQNVEKEQEKQFSEQKYYRFITFIWVYVQWAMLFWACYVIAFGTWQPLHLVGFTLGIACVMGGIGITVAHELGHKNTKIEQFYSQILLLSVSYMHFFIEHNKGHHVHVATPLDPASSRKDETVYAFWLRSVVGGYRSAWKIENDRLARAKLPFYRNQMLYYTILPLLLAASLYAIFSWISGENVWQVPLFFVVQSILSFSLLELVNYIEHYGMQRKALAE 272
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Match: A0A1E5SRJ6_9BACT (Alkane 1-monooxygenase n=1 Tax=Roseivirga sp. 4D4 TaxID=1889784 RepID=A0A1E5SRJ6_9BACT) HSP 1 Score: 192 bits (487), Expect = 1.720e-52 Identity = 101/252 (40.08%), Postives = 149/252 (59.13%), Query Frame = 1 Query: 427 IPFFVVKGVQEGGAWTAIGFYWAFIFLPFADFVVGVDTFNKRDNEYKVLRDRKSFHLASWIFLPAQLALLAYACHAVNTIPLGPFEFFGFVVSVAVYTGGLGITLSHELVHKSNRLEQWLGRAMCVIISYGHFYVEHNRGHHKAVATDQDPATARFGESFYAFLPRCVGGSFVSAWRLEIDRLRDRNLPFYN--NEMLWYWLASATLCALLTLVFG------PKTVPLFL-GQSFVGILFFESVNYVEHYGV 1155 IP V G GG W + + F+F+P AD+++G D N D+E +V+ ++ + L ++++ Q++ L + + + + GFV+S A+ TGG+GIT++HEL HK ++LE+ R + + + Y HFY+EHNRGHH VAT +DPAT+R E+FYAF R V GS+ SAW+LE RL + F++ NEM+WY + ALLTL+ VPLF QS + E VNYVEHYG+ Sbjct: 15 IPLLAVLGFYLGGYWNYLTVVFVFVFIPLADWLIGQDPENMTDDEARVVSEQFYYRLITYVWTIFQVSFLVWGAYVMADSNMELQYLIGFVLSFALVTGGIGITVAHELGHKKSKLERVYARIILMTVCYMHFYIEHNRGHHVYVATPRDPATSRKNENFYAFWFRSVIGSYTSAWKLERSRLERKGASFWSTQNEMIWYTMLPLVFAALLTLIISLFFDRIVWEVPLFFFAQSLLAFTLLEIVNYVEHYGI 266 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1488.3520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1488.3520.1 >prot_L-elsbetiae_contig1488.3520.1 ID=prot_L-elsbetiae_contig1488.3520.1|Name=mRNA_L-elsbetiae_contig1488.3520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=354bp MAPHSAGVLAGESVDPLSTEQRLLVPGKDPWWALRDHPPPSPRMVRLCPHback to top mRNA from alignment at L-elsbetiae_contig1488:18518..25721+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1488.3520.1 ID=mRNA_L-elsbetiae_contig1488.3520.1|Name=mRNA_L-elsbetiae_contig1488.3520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7204bp|location=Sequence derived from alignment at L-elsbetiae_contig1488:18518..25721+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1488:18518..25721+ >mRNA_L-elsbetiae_contig1488.3520.1 ID=mRNA_L-elsbetiae_contig1488.3520.1|Name=mRNA_L-elsbetiae_contig1488.3520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2124bp|location=Sequence derived from alignment at L-elsbetiae_contig1488:18518..25721+ (Laminarionema elsbetiae ELsaHSoW15)back to top |