mRNA_L-elsbetiae_contig1488.3518.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig1488.3518.1
Unique Name	mRNA_L-elsbetiae_contig1488.3518.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Match: A0A6H5JSG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG4_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.370e-23
Identity = 77/194 (39.69%), Postives = 110/194 (56.70%), Query Frame = 3

Query:  708 ARIQMDWISSDNATADVEYSAGVHVILSENGGDSQGEESTMV--PYSRNQISSSDRSYETTVLMIGKTNRKYLSGASITNYPVLTISTTRFVTTPQDFDLFSSDSSYASAWEVTEDSAIGTLFLEISQGSYSHTEVEDIEPLEIGALFGNVGGFWELLVLAWGIFFITKARDAEPTLKARNFAKVLQHGAAKKR 1283
            A I M+W++SD A     Y+  V V  S +    + E+ + V  PY R   +       T  L IGKT +K L G+S T +P LTISTT   T  Q+  L SS  +YA       + A+G L L + QG +S T VE++ PL++G+ FGN+GGFWELL++ WG+ F    +D  P L+ARNF + L+   A++R
Sbjct:   58 ATISMNWLASDTADTATIYTEQVAVTASASDDLPEVEDISFVYVPYDRYTTADPIDELNTVDLTIGKTTKKMLDGSSTTVFPALTISTT--TTVIQETSLPSS--TYA-------EYALGYLKLMVRQGPFSLTSVEEVSPLDVGSFFGNLGGFWELLLVLWGLLFFATRQDRTPQLRARNFIQPLKEIVARRR 240

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BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Match: D7FU22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU22_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.120e-11
Identity = 47/110 (42.73%), Postives = 60/110 (54.55%), Query Frame = 3

Query: 1065 LFLEISQGSYSHTEVEDIEPLEIGALFGNVGGFWELLVLAWGIFFITKARDAEPTLKARNFAKVLQHG-------------AAKKRKRRKLDSAAAEEAGHDGARPPDWD 1355
            L +EI+Q + S  E+ +I PLEI  LFGNVGGFW+LL+L W IFFI+ +R  +P LK RNF K +  G             A   R RRK     +     D  RPP W+
Sbjct:   59 LSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQ-DPHLKGRNFKKSVTRGSDRVVDLTRRVNNATPYRVRRKAGDRKSNATDEDEERPPAWE 167

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BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 1.350e-9
Identity = 46/113 (40.71%), Postives = 63/113 (55.75%), Query Frame = 3

Query: 1065 LFLEISQGSYSHTEVEDIEPLEIGALFGNVGGFWELLVLAWGIFFITKARDAEPTLKARNFAKVLQHGAA-----KKRK-----------RRKLDSAAAEEAGHDGARPPDWD 1355
            L +EI+Q + S  E+ +I PLEI  LFGNVGGFW+LL++ W IFFI+ +R  +P LK RNF K +  G+       +R            RR+  S  +   G DG  PP W+
Sbjct:  252 LSMEIAQTTDSLEEITEINPLEIAELFGNVGGFWDLLLMLWPIFFISASRQ-DPHLKVRNFKKSVTRGSEVVVDLSRRVNSASIEIPHPLRRQPGSRQSNATGEDGEPPPAWE 363

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BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Match: D7G5W1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5W1_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 3.800e-8
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 3

Query: 1071 LEISQGSYSHTEVEDIEPLEIGALFGNVGGFWELLVLAWGIFFITKARDAEPTLKARNFAKVLQHG 1268
            L I QG  S   + +  P+ IG L G++GGFW++L+L W +FF+  +++ EPTLK RNF K LQ G
Sbjct:  138 LRIKQGPNSLETITEDAPVTIGELLGDIGGFWDILLLLWPVFFVVVSQE-EPTLKPRNFRKSLQRG 202

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BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 5.710e-8
Identity = 29/68 (42.65%), Postives = 46/68 (67.65%), Query Frame = 3

Query: 1065 LFLEISQGSYSHTEVEDIEPLEIGALFGNVGGFWELLVLAWGIFFITKARDAEPTLKARNFAKVLQHG 1268
            L L++ Q   SH  + +++PL++  +FGNVGGFW+LL++ W IFF+  +R  +P LK RNF + +  G
Sbjct:  253 LSLQVQQAPNSHECITEVDPLDLAEMFGNVGGFWDLLMIIWPIFFVAASRQ-DPHLKPRNFKESVTKG 319

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BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Match: D7FTW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW9_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 9.940e-8
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 3

Query: 1077 ISQGSYSHTEVEDIEPLEIGALFGNVGGFWELLVLAWGIFFITKARDAEPTLKARNF 1247
            I QGSYS   +EDI+PL+IG L GN+GGFW  ++L++ +FF     +  P L+AR F
Sbjct:    6 ILQGSYSFITIEDIDPLDIGDLLGNIGGFWGYVLLSFAVFFTVAEPEKLPRLRARAF 62

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BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.810e-7
Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 3

Query: 1065 LFLEISQGSYSHTEVEDIEPLEIGALFGNVGGFWELLVLAWGIFFITKARDAEPTLKARNFAKVLQHG 1268
            L L++ Q   S   + +++PL++  +FGNVGGFW+LL++ W IFF+  +R  +P LK RNF K +  G
Sbjct:  293 LSLQVQQEPNSLEVITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQ-DPHLKPRNFKKSVNKG 359

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BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Match: A0A6H5JND4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND4_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 8.680e-7
Identity = 42/134 (31.34%), Postives = 69/134 (51.49%), Query Frame = 3

Query:  867 RSYETTVLMIGKTNRKYLSGASITNYPVLTISTTRFVTTPQDFDLFSSDSSYASAWEVTEDSAIGTLFLEISQGSYSHTEVEDIEPLEIGALFGNVGGFWELLVLAWGIFFITKARDAEPTLKARNFAKVLQHG 1268
            +S+  T +++  T  K L G +  +Y   TI +  +V+     D+ +    YA             + L I QG  S   + +  P+ IG L G++GGFW++L+L W +FF+  ++  +PTLK R+F K LQ G
Sbjct:  223 KSHMFTDVVLALTETKKLDGTTDRSYRAETIYSNPYVSDQVGEDISNITRPYA------------FIDLRIKQGPNSLEFITEDSPVSIGELLGDIGGFWDVLLLLWPVFFVVVSQQ-DPTLKPRDFRKSLQRG 343

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BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.310e-6
Identity = 29/68 (42.65%), Postives = 44/68 (64.71%), Query Frame = 3

Query: 1065 LFLEISQGSYSHTEVEDIEPLEIGALFGNVGGFWELLVLAWGIFFITKARDAEPTLKARNFAKVLQHG 1268
            L L+  Q   S   + +++PL++  +FGNVGGFW+LL++ W IFF+  +R  +P LK RNF K +  G
Sbjct:  325 LSLQFQQEPNSLEIITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQ-DPHLKPRNFTKSVTKG 391

[Close]

BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Match: A0A6H5K6D1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6D1_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.350e-6
Identity = 60/184 (32.61%), Postives = 88/184 (47.83%), Query Frame = 3

Query:  735 SDNATADVE----YSAGVHVILSENGGDSQGEEST--MVPYSRNQISSSDRSYETTVLMIGKTNRKYLSGASITNYPVLTISTTRFVTTPQDFDLFSSDSSYASAWEVTEDSAIGTLFLEISQGSYSHTEVEDIEPLEIGALFGNVGGFWELLVLAWGIFFITKARDAEPTLKARNFAKVLQHG 1268
            SD+ T  VE    +S  ++V L + G    G  ST   VPYS   I++   S+  T + IG T  + L    +     L++ST     T +D    + D  YA             L L+  Q   S   + + +P ++  +FGNVGGFW+LL+L W IFF+  +R  +P LK RNF K +  G
Sbjct:  113 SDSNTCVVEGWEPHSEWMYVKLKDPGYPESGLVSTGIQVPYSC--ITNVSSSHSFTYVGIGVTIEERLGEEPVATNKALSVSTA----THRDKVNAAIDKPYAQ------------LSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQ-DPHLKPRNFKKSVAKG 277

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1488.3518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14


Match Name	E-value	Identity	Description
A0A6H5JSG4_9PHAE	1.370e-23	39.69	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FU22_ECTSI	1.120e-11	42.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FU23_ECTSI	1.350e-9	40.71	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D7G5W1_ECTSI	3.800e-8	46.97	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JN97_9PHAE	5.710e-8	42.65	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FTW9_ECTSI	9.940e-8	49.12	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K474_9PHAE	3.810e-7	42.65	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JND4_9PHAE	8.680e-7	31.34	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LMD1_ECTSI	1.310e-6	42.65	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5K6D1_9PHAE	1.350e-6	32.61	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1488	contig	L-elsbetiae_contig1488:774..7165 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Hypothetical protein
Ec32 ortholog	Ec-21_002290.1
Exons	10
Model size	2889
Cds size	1236
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815600.241889-UTR-L-elsbetiae_contig1488:773..854	1622815600.241889-UTR-L-elsbetiae_contig1488:773..854	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1488 774..854 +
1691682983.4211073-UTR-L-elsbetiae_contig1488:773..854	1691682983.4211073-UTR-L-elsbetiae_contig1488:773..854	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1488 774..854 +
1622815600.2540824-UTR-L-elsbetiae_contig1488:1294..1362	1622815600.2540824-UTR-L-elsbetiae_contig1488:1294..1362	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1488 1295..1362 +
1691682983.4321504-UTR-L-elsbetiae_contig1488:1294..1362	1691682983.4321504-UTR-L-elsbetiae_contig1488:1294..1362	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1488 1295..1362 +
1622815600.2646053-UTR-L-elsbetiae_contig1488:1573..1723	1622815600.2646053-UTR-L-elsbetiae_contig1488:1573..1723	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1488 1574..1723 +
1691682983.4413729-UTR-L-elsbetiae_contig1488:1573..1723	1691682983.4413729-UTR-L-elsbetiae_contig1488:1573..1723	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1488 1574..1723 +
1622815600.2742414-UTR-L-elsbetiae_contig1488:2019..2109	1622815600.2742414-UTR-L-elsbetiae_contig1488:2019..2109	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1488 2020..2109 +
1691682983.4578114-UTR-L-elsbetiae_contig1488:2019..2109	1691682983.4578114-UTR-L-elsbetiae_contig1488:2019..2109	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1488 2020..2109 +
1622815600.3594296-UTR-L-elsbetiae_contig1488:5901..7165	1622815600.3594296-UTR-L-elsbetiae_contig1488:5901..7165	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1488 5902..7165 +
1691682983.5355892-UTR-L-elsbetiae_contig1488:5901..7165	1691682983.5355892-UTR-L-elsbetiae_contig1488:5901..7165	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1488 5902..7165 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815600.284037-CDS-L-elsbetiae_contig1488:2439..2486	1622815600.284037-CDS-L-elsbetiae_contig1488:2439..2486	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 2440..2486 +
1691682983.4699466-CDS-L-elsbetiae_contig1488:2439..2486	1691682983.4699466-CDS-L-elsbetiae_contig1488:2439..2486	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 2440..2486 +
1622815600.293932-CDS-L-elsbetiae_contig1488:3027..3151	1622815600.293932-CDS-L-elsbetiae_contig1488:3027..3151	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 3028..3151 +
1691682983.4808278-CDS-L-elsbetiae_contig1488:3027..3151	1691682983.4808278-CDS-L-elsbetiae_contig1488:3027..3151	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 3028..3151 +
1622815600.3057477-CDS-L-elsbetiae_contig1488:3644..3740	1622815600.3057477-CDS-L-elsbetiae_contig1488:3644..3740	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 3645..3740 +
1691682983.4957807-CDS-L-elsbetiae_contig1488:3644..3740	1691682983.4957807-CDS-L-elsbetiae_contig1488:3644..3740	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 3645..3740 +
1622815600.3187785-CDS-L-elsbetiae_contig1488:4102..4283	1622815600.3187785-CDS-L-elsbetiae_contig1488:4102..4283	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 4103..4283 +
1691682983.5064445-CDS-L-elsbetiae_contig1488:4102..4283	1691682983.5064445-CDS-L-elsbetiae_contig1488:4102..4283	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 4103..4283 +
1622815600.3321557-CDS-L-elsbetiae_contig1488:4687..4932	1622815600.3321557-CDS-L-elsbetiae_contig1488:4687..4932	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 4688..4932 +
1691682983.515123-CDS-L-elsbetiae_contig1488:4687..4932	1691682983.515123-CDS-L-elsbetiae_contig1488:4687..4932	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 4688..4932 +
1622815600.3460858-CDS-L-elsbetiae_contig1488:5358..5901	1622815600.3460858-CDS-L-elsbetiae_contig1488:5358..5901	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 5359..5901 +
1691682983.524432-CDS-L-elsbetiae_contig1488:5358..5901	1691682983.524432-CDS-L-elsbetiae_contig1488:5358..5901	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1488 5359..5901 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1488.3518.1	prot_L-elsbetiae_contig1488.3518.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig1488 2440..5901 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig1488:774..7165+
coding sequence from alignment at L-elsbetiae_contig1488:774..7165+

protein sequence of mRNA_L-elsbetiae_contig1488.3518.1

>prot_L-elsbetiae_contig1488.3518.1 ID=prot_L-elsbetiae_contig1488.3518.1|Name=mRNA_L-elsbetiae_contig1488.3518.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=412bp
MDWISSDNATADVEYSAGVHVILSENGGDSQGEESTMVPYSRNQISSSDR
SYETTVLMIGKTNRKYLSGASITNYPVLTISTTRFVTTPQDFDLFSSDSS
YASAWEVTEDSAIGTLFLEISQGSYSHTEVEDIEPLEIGALFGNVGGFWE
LLVLAWGIFFITKARDAEPTLKARNFAKVLQHGAAKKRKRRKLDSAAAEE
AGHDGARPPDWDSSDDAMHSSGASDSDASQKGEIPGRRRTHHRPAGLRRP
IAHPLPRRVSHSKPSSLGTSATTCSTLAQSRRSSASMAAGTISSMSSAKT
VRRWSGSNATSAANKFNTHDAGMAQARNPVFTANGSRSGSFSNNFNGGDD
AKARTSFFPTPDASASRIHPDSGDESSWSATRPAQETNSFVENCGNEDAE
ENDLELGTVMS*

mRNA from alignment at L-elsbetiae_contig1488:774..7165+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig1488.3518.1 ID=mRNA_L-elsbetiae_contig1488.3518.1|Name=mRNA_L-elsbetiae_contig1488.3518.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6392bp|location=Sequence derived from alignment at L-elsbetiae_contig1488:774..7165+ (Laminarionema elsbetiae ELsaHSoW15)
GGAAGCCTTCGAGCGTGGTCTCACAGCACAGGAACCGCGCCATCGTCGTC
TGGGTTGCCATTCTCACCACAGCCTTGGGATGTGAGTCGGGTGCACGGTT
TTCCGGCGTGCTTGTTTGTGAAGCCCATGTCTGCCCCCCAAACACATTGC
CCAAATTCTCAGACAAGATCGCTGAATCGTAGGAGCGGTTGTTGGTTCGG
ACGGTGAAGCACGTCTGATCTCGGTCGAGATGCCGAAAGTCATATAGTAG
ACACGCATTTCTGTTCGGTTCATTGCCCGTATGTACACGTGTACCCTGGA
TTTTTTTCGCTGCTCAGTCCTTCGAAGCTTTCTCCTGCGGTTTCGTCGCA
TGTCAACAGACGCACCGTGAGCGGTATGGCGGTGGCGATACACTACACTT
CGAACATGCATGTATGTGCGTCAGCGGGTTCAGCCCCTCGGAATCGCCGA
AAACTTCATAATAAGTTTCAACGCTCGTACTCCCTGTCTGTATCCTCTAT
GTTTTTTCTTGGTACGCGCAGACACAGTGTGGCAGATAACGGTGGTCGTC
CGCAAGCGGCAAAACCCGAGCACCAAGCTTGTGGTATCGGTGAGTACAAG
CCACCCTGGCGCTTAATTGATAAACATGGAGCAATCAGGTAGGACATGAT
GCGGAGATTTATTTTTTATGAAAACGAGTACGCACGGAACTTGACAGGAA
AATTGGACAATAGTTTATGTATCCAAACTGACATGCCTATTGTTCGTGGC
TGTGAAACAGATTGTCTCTGCCGCCTTCGCCCTCTTTTTTAAACTTTCAG
AATCATCAGTTCCAGTTCCCCGTGGTGTCGGTGTGCCTCGAGGACGGATT
TGGGTGCGGATACGATGTAGACGCGTGCGTCGCGTCCGCGATTGCGTTCT
CGAGTGTCAGTCTCGAGGGCGAAGACGACATATATGGTGCCCAGGGGCAG
GTGCGCACGCAAAAATGCTTGTTGGATAGTCGGAGTCGAGGTATGTAGGA
TATTGTGGGCTTGGGTATGTTCGCAGTATCAACCGTAGACCAAACCCGAT
CCCCATTGATTGCGTGACATTTTGTCGATACCTTTTGCGCTGTAGGACCT
GGTAGATGCTGCCCAACCTTGCCCATGACCATACGCCAGGTACCTGACCC
TTCGCCTATTTTCGTCCCCCCCCCCCCGCCCTTTCTCGTCCCTTGTGCCC
CCGCTGCGTCGCCCCATGCCGGCGATTGCTTCTTTAACAAACACAGGAGG
ATAACTGCGTTGAGTTCGACTTGACACAGTTCGAAGTTCCTGAAGGTGAT
CGGGAGAATATCCCGAGCGTAACGGCATCTTTTTCGGTGAGCCAGTAGCT
CCTTCTCATATCAAGCAGTGAGCGCGCTTGATAAGTACCTCAGCGGGTGT
TGCTTTGTCTTCGGGACCCAGTCGCCATTAGAACTGTCACCCTGCTCGCT
CCGCCTGCCGGCGGTTGGGTTCGGGTAGCGACCGGTGTAGACACCATGGA
ATTGGATGGGATGCTTCCTGTGTAGCCTAAACAAGCATCCCAAAACGACA
CCTTCCTCTTTCACCTGAACGTGGCCTGACACGTTCGTCGCTTAAAACTT
ATCTGCGGGTGCGTTCCGTACCGGCGGTGCCGTTGCATGACTTCGCCGCC
CTTTGCGCGGATTCAGATGGACTGGATTTCAAGCGACAACGCTACTGCGG
ATGTTGAATACAGGTGGGTGCTATGTACTGCTGCTGTAGTTTGATGCGAC
CCCGCTTCGTCGTTTGGGGTTGGCGAAGATCCCACAGCATGAACTCTGGA
AGTCCAGCCCAGGAGTGGAAAGCGACTAAATATAAGCCGACCGTTACGCA
ACACCTCCGACAAGACTACATATTATAGCGTTCGAAGGAATTTCGGAACG
AGGCCAATCTTGGGGCCCAAACCATCCATAGACTGATTGATGTTTGCGCG
CATGTTGTGGAGAGTGTGTGTGCTCTTGCACGATGGCTGAAATACGCCCA
AAGCGTGCCCCCGCCGACGGTGTACATACGTGGAGTGTCGCTCTGCCGGC
CGCCTTGATACCACAACAACAGCGGGACGCGAAAGGCGCCAGCTTTCCCA
GCCCTGATATTCTTATATCGCCTTCTAAGGTGTATCTACTTATGTAGTTC
TGCGCTATTAATCCTAGGAGTTGATTGATCGGGCCGTGCAAATCACGTAC
TTCCCCGCCCTGCTGTGTTCTTCGTTTTTTCATGCACGTTTGTGTGGAAA
CCAGTGCGGGGGTTCACGTCATTTTGAGCGAGAATGGCGGCGATAGCCAG
GGAGAGGAATCTACGATGGTGCCCTACAGCCGTAACCAGATTTCGTCGAG
CGACCGAAGTTACGAAACAACGGTCTTGGTGAGTAGGAGGGAAGATTGAA
ACGGTATTTTTAAGTTGCAGGCAGTTTTGTAAACGGGTCGCGGCATACAA
TGTTACGGGTTGAAGCCAGCCTTCGCTAACCGAAATACCAGTGATTTTCG
TTGCGTTTTGGTGGAGTGATACGCCAATGAATGCGTCGATATGGATGCCA
ACAGAGGCTGGCGTACAGCACATGAAATGGAGCAAACTCCAATTGAATCA
TCCTGTAGATCGCAAACAACGACCCGCTCGTTGCGTCGTTGTTATTCATA
GGGTTCGAACGCCGAATTGAAACCACTGCATGCGGAATACTCAGGTTATA
TCTCGAGTTCGTGTGTATCTATCGTGATTACAGAGTTGGTGCTTCGATGT
GCCCTCTTGATTTACTGAGGGCGTTGAATGGCCCTCGGGCTGGCCCACAT
CGTTCGACCGGGCATCTGATCGTAGATTTTTCCTACGCCATTTTATCTCA
CTGATTTGGCCGCAACACAAGATGATCGGCAAGACCAATCGCAAATACCT
ATCTGGCGCCTCCATCACAAACTACCCTGTGCTGACGATCTCGACGACCA
GATTCGTCACAACCCCGGTGAGAATGGAGGCATTTACATACGCAGTCAGC
GTCAATTTCAAGGGATTCCATTGCTCGCGAAGCTCTGAAAACTGCGGTTT
CCTTTTGTGCCATTATTGTACGCATGTACAGTAGTATTACTAGCGACAAA
GCCGCAAGCGTGGAGTGCGTTCAAAGAAACCCTGTTCTGTGGGCTTTTGC
TAGAAGAGCAGGCCGAGGCACGGTGTTGGGAATATAGCGTGCCTGTACCG
GCCGCTTGGCAAAAGAAGACCAAAGGGGCTAAATACACATACACAAAGAA
CGACCCCCCACCCGTTATCAACCCCCGTGTTCGATGCCGTCGGTTCCGAT
CCAACATCTCGCTATCCACCCGTGTCGAGCAGGACTTCGATCTGTTTTCG
TCAGACTCATCGTATGCGAGCGCGTGGGAAGTCACCGAGGACTCGGCAAT
TGGGACGCTCTTCCTGGAAATCTCTCAGGGTTCCTACTCTCACACCGAAG
TCGAGGACATCGAACCACTGGAAATTGGCGCTCTTTTCGGAAACGTTGGG
GGCTTTTGGGGTACGTATGTACGTAGAGTTGATGTGTAAGGAGTGCAGAT
TGTTTGGTATTGCTCTACATAAGAGCTGTTTTCTGGGGTAACAACCGCAA
CGAGGCGGCGCGGCGTCGACAAATGCTGCAGCATGCCAAAAACGCTTCCA
ACTTCTCCAGTATTGGAAGAAAAACACGTCGTTTGCACAGATGGCAGGTC
TGGCATGGCAGTCTGGAATGTAAGAGGTACAGCAGTATGTGGAAAGCATT
CGTGTGCCCTACTGTACATATAGTCGGGGGATAGATGCTCTCTTGCCTGA
GGTCGGTCTTCTCTCCGCTCAGTCTACGCTGTCTGCACGCTCCTCAAATT
ATTTCAATCGCAAGTTTCGCCATCATGGTTGGTTTCCCTGCTTCTCCGCC
CGTCCGCCTGTCAGAGCTGCTAGTGTTGGCGTGGGGAATATTTTTCATCA
CCAAAGCTCGTGACGCAGAGCCCACGCTGAAAGCGCGCAATTTCGCCAAA
GTTCTCCAGCACGGAGCTGCTAAAAAGCGAAAACGCCGGAAGCTAGACTC
GGCCGCAGCCGAAGAGGCTGGCCATGACGGTGCCAGACCACCGGACTGGG
ACTCTAGCGACGATGCTATGCACTCTTCTGGCGCAAGCGACTCGGACGCA
AGCCAAAAGGCGAGACGGGCGAGAGATAACCATCAGTCATTCCACTGTTT
TATTGCTATTTTTCCAAGGGGTACCTGCGTAGATATTTAACCATACCCGG
ACGAGGATCCGAGTGAATTTGGGGGAATAAATACAGAGGTAGGTCGTTTC
GTCTACCAGTGTTCTGTTTCTCTATGCTGGGCGCAGGTACAGTGATAACT
CCCTTCCAGTAATAGCTGGCTCAGCAAGACAAGATGTTGTCATCTTGGTG
TATCGGAGTGTTTAATAATCTCGACGAGGTTGGACCCGCTAAGAGTTGCA
CCCGTTGGACCAAGAAGCATCCACCACCAGGTTCTAGAGTCATACTTACA
CATCGCCGAGAACCTCAGCACCCTCCCACTAGACCATACGCCGCGCTCGT
GTGATTGCTTCCTGATTTTCTTCGACACCCTACAGGGCGAGATACCCGGC
CGACGTCGCACGCACCACCGCCCGGCAGGGCTTAGGCGTCCGATAGCCCA
CCCTCTACCCAGGCGCGTGTCCCACTCCAAACCAAGCAGCCTCGGTACCT
CTGCGACGACATGCAGCACTCTGGCGCAATCCCGGCGCAGCTCCGCCTCC
ATGGCGGCCGGGACCATATCTTCCATGTCGAGCGCGAAGACGGTGCGGCG
TTGGTCTGGGTCAAACGCCACCAGTGCCGCAAATAAGTTCAACACCCACG
ATGCGGGCATGGCACAGGCACGGAACCCGGTATTCACCGCCAACGGTAGC
AGGAGCGGCAGCTTCAGCAACAACTTCAACGGCGGCGATGACGCCAAGGC
GCGAACAAGCTTCTTTCCCACACCCGACGCCTCCGCCAGCAGAATCCACC
CCGACAGCGGGGACGAATCGTCATGGTCGGCAACGAGACCAGCCCAAGAA
ACGAATAGCTTTGTCGAGAATTGTGGTAATGAGGACGCCGAAGAAAATGA
TTTGGAACTTGGTACGGTGATGAGCTGATGGAAGGTCGTCACGGAGAGGC
ATAGCGCGTTTGCGATGGTGTGACGATGGCAGGCGGCGGGTGCCAACAAC
GACAGGCCGGCGCGAGCACAGGCTGAGATCACGAGGGCTCAGGGCTTCTC
GAATATTCCAAAGAGTCATTCGCTTAATTATGATGGCAAGGTCTAGCGGT
GCGGCACCTTCTGGAAAGCCAATGTAGGTACGTTATTAGCTGGCATATAG
TATCACGGCTGTTTTTCGACTATTTGTCGTTGTTTTCGCAGGGAGGTTAC
GCCGTTCATGCAGTTTCGCTGACTGAGTGGTCTATCTAGTGGATAGATAA
GTCACATCTAACGAACAATAGATACCCTTTCTCCCAATAGACTCGCCAGG
TGTCGGTCTCCGGGGAGCTCCCCCTTCTCAGGGACTCCCCTCGCCAGCAC
TGGCTAGTGGTTGGGGTCGGCTATGAGTGTACGCCCTCTCTAATGTGCCT
TCCAGCCCGTGCTTTCCTCCTCCCTGCCGGAGAAGGCACTTTTGCCTTTC
AGATAAGTCAGAAAAAGGCGACACCTGGCGAGATTCGAACTCCAGCGTGT
CTTTGGTACGTTAGATATCGCTGACTGAGTGGTCTAGTGGATAAGTCCAT
CTAACGAACAATGTTACCATATAGTCACGCGTTTTTTTTACCCAGTGGGT
GGTAGCCCCGAGCCTGCGTGGCGAGCACGTTTTCTCAGGAAACATTGGCT
TTGGAGTAGCTTTTCATTTCGACTTTGCCGTGCGATTTTGTTTTCAGCGA
TGTTAAGCCGAGAGGATTGGTTATAGTCTGTTGTCTGTGAAAGCCCTTAC
TACTGCGTTGTAAGAGCGGAAACCCCGATGTGGCCCCGTGTTTAGGATTG
TTTTACCAGTTTCCCCCCCTTTCCCTGCTCTTTTCTTCCTGTGAGGTGTT
CATATTTCGCTGAATTTGGTTGCCCACGCCCGACACTTGTTTGTGCCGTC
GTTGTTGGTGTTGTCGTCGTTGTTTGTGGTTGTTGTCCGTGTTGTTTTCG
TCGTCAACGAAACCTTGGTTCTGTCTCCCGTTGTTGTTAATGTTGGCCAC
AAAACCTTGGTTTTGCTGCCAACGACTGGAATTGCGTGGTCACGAGAGAG
TAGAGTGCCGAGGCGCCAAACTAGTTTTTACCTTCCTTGTCGCCAGAATA
GAGCTACGAGAGAGTGCTGATTCGTTCGGAATTTCAACACGTTGGAGGGC
AAACTCAATTGGTGTGAAAACGAAGCACGCGATCATGCGAAG

Coding sequence (CDS) from alignment at L-elsbetiae_contig1488:774..7165+

>mRNA_L-elsbetiae_contig1488.3518.1 ID=mRNA_L-elsbetiae_contig1488.3518.1|Name=mRNA_L-elsbetiae_contig1488.3518.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2472bp|location=Sequence derived from alignment at L-elsbetiae_contig1488:774..7165+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGACTGGATTTCAAGCGACAACGCTACTGCGGATGTTGAATACAGATG
GACTGGATTTCAAGCGACAACGCTACTGCGGATGTTGAATACAGTGCGGG
GGTTCACGTCATTTTGAGCGAGAATGGCGGCGATAGCCAGGGAGAGGAAT
CTACGATGGTGCCCTACAGCCGTAACCAGATTTCGTCGAGCGACCGAAGT
TACGAAACAACGGTCTTGTGCGGGGGTTCACGTCATTTTGAGCGAGAATG
GCGGCGATAGCCAGGGAGAGGAATCTACGATGGTGCCCTACAGCCGTAAC
CAGATTTCGTCGAGCGACCGAAGTTACGAAACAACGGTCTTGATGATCGG
CAAGACCAATCGCAAATACCTATCTGGCGCCTCCATCACAAACTACCCTG
TGCTGACGATCTCGACGACCAGATTCGTCACAACCCCGATGATCGGCAAG
ACCAATCGCAAATACCTATCTGGCGCCTCCATCACAAACTACCCTGTGCT
GACGATCTCGACGACCAGATTCGTCACAACCCCGCAGGACTTCGATCTGT
TTTCGTCAGACTCATCGTATGCGAGCGCGTGGGAAGTCACCGAGGACTCG
GCAATTGGGACGCTCTTCCTGGAAATCTCTCAGGGTTCCTACTCTCACAC
CGAAGTCGAGGACATCGAACCACTGGAAATTGGCGCTCTTTTCGGAAACG
TTGGGGGCTTTTGGGCAGGACTTCGATCTGTTTTCGTCAGACTCATCGTA
TGCGAGCGCGTGGGAAGTCACCGAGGACTCGGCAATTGGGACGCTCTTCC
TGGAAATCTCTCAGGGTTCCTACTCTCACACCGAAGTCGAGGACATCGAA
CCACTGGAAATTGGCGCTCTTTTCGGAAACGTTGGGGGCTTTTGGGAGCT
GCTAGTGTTGGCGTGGGGAATATTTTTCATCACCAAAGCTCGTGACGCAG
AGCCCACGCTGAAAGCGCGCAATTTCGCCAAAGTTCTCCAGCACGGAGCT
GCTAAAAAGCGAAAACGCCGGAAGCTAGACTCGGCCGCAGCCGAAGAGGC
TGGCCATGACGGTGCCAGACCACCGGACTGGGACTCTAGCGACGATGCTA
TGCACTCTTCTGGCGCAAGCGACTCGGACGCAAGCCAAAAGAGCTGCTAG
TGTTGGCGTGGGGAATATTTTTCATCACCAAAGCTCGTGACGCAGAGCCC
ACGCTGAAAGCGCGCAATTTCGCCAAAGTTCTCCAGCACGGAGCTGCTAA
AAAGCGAAAACGCCGGAAGCTAGACTCGGCCGCAGCCGAAGAGGCTGGCC
ATGACGGTGCCAGACCACCGGACTGGGACTCTAGCGACGATGCTATGCAC
TCTTCTGGCGCAAGCGACTCGGACGCAAGCCAAAAGGGCGAGATACCCGG
CCGACGTCGCACGCACCACCGCCCGGCAGGGCTTAGGCGTCCGATAGCCC
ACCCTCTACCCAGGCGCGTGTCCCACTCCAAACCAAGCAGCCTCGGTACC
TCTGCGACGACATGCAGCACTCTGGCGCAATCCCGGCGCAGCTCCGCCTC
CATGGCGGCCGGGACCATATCTTCCATGTCGAGCGCGAAGACGGTGCGGC
GTTGGTCTGGGTCAAACGCCACCAGTGCCGCAAATAAGTTCAACACCCAC
GATGCGGGCATGGCACAGGCACGGAACCCGGTATTCACCGCCAACGGTAG
CAGGAGCGGCAGCTTCAGCAACAACTTCAACGGCGGCGATGACGCCAAGG
CGCGAACAAGCTTCTTTCCCACACCCGACGCCTCCGCCAGCAGAATCCAC
CCCGACAGCGGGGACGAATCGTCATGGTCGGCAACGAGACCAGCCCAAGA
AACGAATAGCTTTGTCGAGAATTGTGGTAATGAGGACGCCGAAGAAAATG
ATTTGGAACTTGGTACGGTGATGAGCTGAGGCGAGATACCCGGCCGACGT
CGCACGCACCACCGCCCGGCAGGGCTTAGGCGTCCGATAGCCCACCCTCT
ACCCAGGCGCGTGTCCCACTCCAAACCAAGCAGCCTCGGTACCTCTGCGA
CGACATGCAGCACTCTGGCGCAATCCCGGCGCAGCTCCGCCTCCATGGCG
GCCGGGACCATATCTTCCATGTCGAGCGCGAAGACGGTGCGGCGTTGGTC
TGGGTCAAACGCCACCAGTGCCGCAAATAAGTTCAACACCCACGATGCGG
GCATGGCACAGGCACGGAACCCGGTATTCACCGCCAACGGTAGCAGGAGC
GGCAGCTTCAGCAACAACTTCAACGGCGGCGATGACGCCAAGGCGCGAAC
AAGCTTCTTTCCCACACCCGACGCCTCCGCCAGCAGAATCCACCCCGACA
GCGGGGACGAATCGTCATGGTCGGCAACGAGACCAGCCCAAGAAACGAAT
AGCTTTGTCGAGAATTGTGGTAATGAGGACGCCGAAGAAAATGATTTGGA
ACTTGGTACGGTGATGAGCTGA