prot_L-elsbetiae_contig1485.3505.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1485.3505.1
Unique Nameprot_L-elsbetiae_contig1485.3505.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length78
Homology
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BLAST of mRNA_L-elsbetiae_contig1485.3505.1 vs. uniprot
Match: D7G626_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G626_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 5.580e-20
Identity = 48/77 (62.34%), Postives = 55/77 (71.43%), Query Frame = 0 
Query:    1 MSRFLEYGVFVPDPKKEGSAPEPSSSLSATQTGQWAQVGGKWLKVGPDGQPLVPPPRS-FSQTMPASSGNGGXGGAE 76
            MSRFLEYGVFVPDP    S+   S+  S T TGQWAQVGGKW KVGPDG+PL  P +S FSQ+ P + G GG GG +
Sbjct:    1 MSRFLEYGVFVPDP----SSKHGSTQSSQTATGQWAQVGGKWCKVGPDGKPLNAPSKSSFSQSSPINMGGGGEGGVD 73
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1485.3505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G626_ECTSI5.580e-2062.34Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1485contigL-elsbetiae_contig1485:21951..22184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1485.3505.1mRNA_L-elsbetiae_contig1485.3505.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1485 21178..22184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1485.3505.1 ID=prot_L-elsbetiae_contig1485.3505.1|Name=mRNA_L-elsbetiae_contig1485.3505.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp
MSRFLEYGVFVPDPKKEGSAPEPSSSLSATQTGQWAQVGGKWLKVGPDGQ
PLVPPPRSFSQTMPASSGNGGGGGAEAQ
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