prot_L-elsbetiae_contig10301.350.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10301.350.1
Unique Nameprot_L-elsbetiae_contig10301.350.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length309
Homology
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BLAST of mRNA_L-elsbetiae_contig10301.350.1 vs. uniprot
Match: D7FY84_ECTSI (SGF29 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY84_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 9.860e-48
Identity = 148/252 (58.73%), Postives = 163/252 (64.68%), Query Frame = 0 
Query:    1 RHFAGWSINEEAIMRSFCAGLASSTLGV-RRGLGEEEKAEAERKRKRQDSLD-GLDVVPPSPELWGT----------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGLSYRNPTSSRRTPPYXXXYGGDDGPDFEFETDEQVSSRAPGLPPTAWILARVVRQMGDGKVELHDEDDASHVFELPERDVLHLEDFSSDLRKHDKVLAVFPDTTIFYPATVAKDTPRMDGNSKVV 240
            RHFA W INEE+IMRSFC GLASST+G   R LG+ E      KRKR DSLD  L++VPPSPEL G           G         XXXXXXXXXXXXXXXXXXXXXXXXXXXX          +GL  +   SS     +             F+T EQV++   G    AWILARVV+  G GKVELHDEDDASHVFELP   V HLED SSDL KHDKVLAVFPDTTIFY ATVAKD+PRMDGN+KV+
Sbjct:   64 RHFAAWRINEESIMRSFCQGLASSTIGTPTRTLGDAEN----NKRKRLDSLDRDLNIVPPSPELLGLANAAAASVGRGSRRDPHHKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXASDRRGDDGGLGLLAQGAASSSSLFTHRPVV---------FDTAEQVAAYVSG----AWILARVVQHKGYGKVELHDEDDASHVFELPISQVRHLEDLSSDLGKHDKVLAVFPDTTIFYCATVAKDSPRMDGNTKVL 298
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BLAST of mRNA_L-elsbetiae_contig10301.350.1 vs. uniprot
Match: A0A482S0X9_9ARCH (SGF29 C-terminal domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0X9_9ARCH)

HSP 1 Score: 53.1 bits (126), Expect = 4.070e-5
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:  162 WILARVVR-QMGDGKVELHDEDDASHVFELPERDVLHLEDFSSDLRKHDKVLAVFPDTTIFYPATVAKDT-PRMDGNSK 238
            WI+  V++      +  + DEDD + V  LP   V  LED +  LR+ D+V+AVFP+TT FY A +AK+  P ++ N++
Sbjct:   19 WIIGNVLQFDPRTSQYLVQDEDDPNRVVALPPEFVRRLEDTAEHLRRGDEVMAVFPETTSFYRAVLAKNPKPPLNSNTQ 97
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10301.350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FY84_ECTSI9.860e-4858.73SGF29 C-terminal domain-containing protein n=2 Tax... [more]
A0A482S0X9_9ARCH4.070e-539.24SGF29 C-terminal domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 200..265
e-value: 1.1E-10
score: 43.4
NoneNo IPR availablePANTHERPTHR21539:SF0SAGA-ASSOCIATED FACTOR 29coord: 80..259
IPR010750SGF29 tudor-like domainPFAMPF07039DUF1325coord: 160..260
e-value: 3.0E-16
score: 59.7
IPR010750SGF29 tudor-like domainPROSITEPS51518SGF29_Ccoord: 140..268
score: 31.892
IPR037802SAGA-associated factor 29PANTHERPTHR21539UNCHARACTERIZEDcoord: 80..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10301contigL-elsbetiae_contig10301:1779..6857 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10301.350.1mRNA_L-elsbetiae_contig10301.350.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10301 1779..6857 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10301.350.1 ID=prot_L-elsbetiae_contig10301.350.1|Name=mRNA_L-elsbetiae_contig10301.350.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=309bp
RHFAGWSINEEAIMRSFCAGLASSTLGVRRGLGEEEKAEAERKRKRQDSL
DGLDVVPPSPELWGTGGGGGGGGGYHRDSGRSYVSSSSASSTPPRSGSRR
AGGGGGGGGGGGGVGLSYRNPTSSRRTPPYGGGYGGDDGPDFEFETDEQV
SSRAPGLPPTAWILARVVRQMGDGKVELHDEDDASHVFELPERDVLHLED
FSSDLRKHDKVLAVFPDTTIFYPATVAKDTPRMDGNSKVVVVYFEDDQEQ
HRRIPVEHVLLEEQHRYGGPGGGRSSGGGGRSGRRVKSGGSRSRSTSPRV
RSGFGGER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010750SGF29_tudor-like_dom
IPR037802SGF29