mRNA_L-elsbetiae_contig14844.3501.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14844.3501.1
Unique NamemRNA_L-elsbetiae_contig14844.3501.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 9.210e-53
Identity = 131/248 (52.82%), Postives = 159/248 (64.11%), Query Frame = 1
Query:  298 VPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLL-QRQEEKPVGWDAYVNARDLCGATPLMNATITFCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREK-KFEGE-ELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNLLRMTLPTL--RRRARRRGVVLTPLLR 1026
            +PLD AA  GH EVV ELI+Q G+ GCGG+SGGV+AL  A++ + + IM  L +AGVVDTG+AL  AA  G ETP+KFLL Q +  K +   AYVN RD  G TPL+     +    PRVVRLL +AGADTTS        GG    I TPL LT + +R+K K  G      EQLH LE IRRLLL+V+AVHA SWLW SD  STI+ AA +  ++TT+    +TLP L  RRRAR R V L  LLR
Sbjct:  188 LPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHY---RPRVVRLLVEAGADTTSPVAVRNQLGGDDVSI-TPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDI-STITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLR 430          
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.500e-50
Identity = 121/251 (48.21%), Postives = 155/251 (61.75%), Query Frame = 1
Query:  298 VPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAG-VVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNA-RDLCGATPLMNATITFC--CCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNL----LRMTLPTLRRRARRRGVVLTPLLR 1026
            VPL++AAL G+ +V RE+I+Q G++GCGG SGGV+AL  A++E+ +  MA L+DAG VVDTG AL  AA +G    VKFLL+R++      DAYVN  RD  G TP+M A        C+P++VRLL DAGA+TT A G TR      +   TPLA TT  LRE + +GE   +EQL  L+  R LL + +AVHA SWLW S  P  I+ AA   K +T S      LR   P LRR+   RGV+L  L R
Sbjct:  184 VPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADA---DAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFR 431          
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 6.750e-50
Identity = 128/269 (47.58%), Postives = 159/269 (59.11%), Query Frame = 1
Query:  244 ADASALLGSSNRHIADDIVPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNA-RDLCGATPLM-NATITFC-CCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTI-----SAAAEKNKNKTTSNLLRMTLPTLRRRARRRGVVLTPLLR 1026
            A A+ LL   N  +A   +PLD AA  G   VV EL+Q+ G++GCGG +GGV AL  A+ +  M +M  L  AGVVDTG+AL  A   G    VKFLLQ+Q   P    AYV+  RD CG TPL+ N  +     C+P+VVRLL DAGADTTS    T  PG +   + TPL+L T+ LR K    + + +E L  LE IRRLLL+V+AVHATSWLW +  P        +AA E   + TT+  LR  LP LRRRAR RG V   L R
Sbjct:  169 AKANPLLTRVN--LAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTL-PVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCR 434          
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 6.910e-49
Identity = 124/246 (50.41%), Postives = 154/246 (62.60%), Query Frame = 1
Query:  298 VPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQ-RQEEKPVGWD-AYVNARDLCGATPLMNATITFCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKF-EGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNLLRMTLPTLRRRARRRGVVLTPLLR 1026
            VPLD+AA  GH++VVRELIQ+ G++GC   S G  AL FA+  Q + IMA L +AGVVDTG AL  AA  G E  VKFLL+ R +E   G + AY+NARD+ G TPL+  T      APR+VR+L DAGADTTS        GG+V F  TPLA T   LR+K   +G+   +E L  LE I RLLL+VDAVHA SWLW S AP  I  A E +        L++ LP L+RR +RR  ++  LLR
Sbjct:  280 VPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVV-FNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPF-IGRATETDPEPPLP-ALKLMLPILKRRTKRRCGLVATLLR 522          
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 3.980e-46
Identity = 120/254 (47.24%), Postives = 151/254 (59.45%), Query Frame = 1
Query:  295 IVPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNARDLCGATPLMNATITFCCCA------PRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPS----TISAAAEKNKNKTTSNLLRMTLPTLRRRARRRGVVLTPLLR 1026
            ++PLD AA  G+  V+RELIQ+ G++GCGG S G  AL+ A E +R+  MA L  AGVVDTG AL  +A  G E  VK+LLQ    K  G  AYVN RD  G TPL+++   + C        PRV RLL +AGADTT+    T + G +V F  TPL LT   L++KK +G  + +++L  LE IRRLLLQV+AVHA SWLW S +        +AA         +  L   LP LRRRARR GVV T L R
Sbjct:  170 LLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHA-KHYGPGAYVNVRDRNGTTPLLSSI--YVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMG-VVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCR 419          
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 7.640e-44
Identity = 136/337 (40.36%), Postives = 171/337 (50.74%), Query Frame = 1
Query:   28 VMALLKAGADFEASTLEGSTPLYMAAEGGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADASALLGSSNRHIADDIVPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLL-QRQEEKPVGWDAYVNARDLCGATPLMNATITFCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNLLRMT---LPTLRRRARRRGVVLTPLLR 1026
            V ALLKAG++      +G+TPLY AA  G                                           A A  LL  ++    +  +PLDVAA  GH EVV ELI+Q G+ GCGG+SGG  AL  A+   R+ IMA L DAGVVDTG+AL  AA  G E P+KFLL Q +  K     AY+N  +  G T L++       C PRVV+LL +AGADTTS       PG   +F  TPL LT   L  +    + L  E+ + LE IRRLLL+ +AVHA SWLW SD P TI+ A  K   +TT+     T   +  + RR R R  +L  LLR
Sbjct:  131 VTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLL---------------------------------AKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQR---CRPRVVQLLVEAGADTTSPVLICNQPGED-DFHITPLGLTMCLLGGRS--AKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTP-TITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLR 427          
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.140e-43
Identity = 112/263 (42.59%), Postives = 155/263 (58.94%), Query Frame = 1
Query:  259 LLGSSNRHIADDIV-PLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNARDLCGATPLM-NATITFCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNL-----LRMTLPTLRRRARRRGVVLTPLLR 1026
            LLG  + ++   I+ PLD A +  H+ VVR+LIQQ G++GCGGAS G  A  +A + Q+  I+  L D G +DTG  L  AA+ GSE  VK LLQ+Q  K + WD YVN +   G TP++          +PRV+RL  DAGADT S    T   G  + F GTPLA TT  LR+++  G +  + +  SLE +RR+LLQ++A+ A SW W SDA S+I  A +  + +  S L     L +TLP  RR+AR R V++  + R
Sbjct:  334 LLGRMDTYLRGRIILPLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDTYVNKKQPDGRTPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQL-FRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLPR-RRKARARRVLVMAMSR 594          
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.390e-41
Identity = 109/245 (44.49%), Postives = 141/245 (57.55%), Query Frame = 1
Query:  298 VPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNARDLCGATPLMNATITFCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIG-TPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNL-LRMTLPTLRRRARRRGVVLTPLLR 1026
            VPLD AAL GH  V REL+Q+ G++GC GAS GV AL  A+ +Q + +MA L DAGVVDTG AL      G E  +KFLL+++ E           RD  G TPL++A +T   C+PRVVRLL DAGAD T    A R P G       TPL   T  L EK  + +    +QL +L   RRLLLQV+ VHATSWLW   A    +   ++ + ++T+   L+  LP + RR+ RRG  L  + R
Sbjct:  183 VPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSA-VTTGPCSPRVVRLLVDAGADATL---AVRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFR 423          
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 2.100e-41
Identity = 119/259 (45.95%), Postives = 140/259 (54.05%), Query Frame = 1
Query:  250 ASALLGSSNRHIADDIVPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVN-ARDLCGATPLMNATITFC-CCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPST---ISAAAEKNKNKTTSNLLRMTLPTLRRRARRRGVVL 1011
            A+ LL S         VPLDVA   GHSEVVREL  Q GV+GCGG SGGV++L  A+ EQ + IM  L   GVVDTG AL  AA +  E  VKFLLQ Q     G   YVN   D  G TPL+  TI  C   +PR+ R L DA ADT S    T++ G       TPL   T  LR+ K   +   EEQL SL+ I RLL QVDAVHA SWLW S        + AA+ + K      LL+     LR    +RGVV+
Sbjct:  156 ANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAG---GGAWYVNNTLDPFGRTPLV-CTIEACGSSSPRIARFLIDAEADTKSTVLVTKS-GQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVV 409          
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 4.800e-41
Identity = 103/203 (50.74%), Postives = 124/203 (61.08%), Query Frame = 1
Query:  427 QRMYIMATLVDAGVVDT-GVALCGAARSGSETPVKFLL-QRQEEKPVGWDAYVNARDLCGATPLMNATITFCCCA-PRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNLLRMTLPTLRRRARRRGVVLTPLLR 1026
            Q M IMA L  AGV D  G  L G A  G E  V+FLL QR++E  +   AY N+ D  G TPL + +I +C    PR+VRLL DAGADTTS    T   GG VE+  TPLA+TT  LREK  +G+   EEQLH L+ IRRLLL+VDAVHA SWLW SDAPS + A       +     L +TLP L+RRA+   V +  LLR
Sbjct:    3 QHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPL-SCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGG-VEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLR 203          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJA9_9PHAE9.210e-5352.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1H7_ECTSI1.500e-5048.21EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7FVK3_ECTSI6.750e-5047.58EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FT11_ECTSI6.910e-4950.41EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LJF9_ECTSI3.980e-4647.24EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KQV0_9PHAE7.640e-4440.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSA9_9PHAE1.140e-4342.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL76_ECTSI1.390e-4144.49EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K037_9PHAE2.100e-4145.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSC5_ECTSI4.800e-4150.74EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14844contigL-elsbetiae_contig14844:3118..4168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score188.7
Seed ortholog evalue4.3e-45
Seed eggNOG ortholog2880.D7G1H7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1051
Cds size999
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14844.3501.1prot_L-elsbetiae_contig14844.3501.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14844 3148..4146 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815598.9960756-UTR-L-elsbetiae_contig14844:3117..31471622815598.9960756-UTR-L-elsbetiae_contig14844:3117..3147Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14844 3118..3147 +
1691682982.843504-UTR-L-elsbetiae_contig14844:3117..31471691682982.843504-UTR-L-elsbetiae_contig14844:3117..3147Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14844 3118..3147 +
1622815599.0279944-UTR-L-elsbetiae_contig14844:4146..41681622815599.0279944-UTR-L-elsbetiae_contig14844:4146..4168Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14844 4147..4168 +
1691682982.8660936-UTR-L-elsbetiae_contig14844:4146..41681691682982.8660936-UTR-L-elsbetiae_contig14844:4146..4168Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14844 4147..4168 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815599.0131664-CDS-L-elsbetiae_contig14844:3147..41461622815599.0131664-CDS-L-elsbetiae_contig14844:3147..4146Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14844 3148..4146 +
1691682982.8575962-CDS-L-elsbetiae_contig14844:3147..41461691682982.8575962-CDS-L-elsbetiae_contig14844:3147..4146Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14844 3148..4146 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14844.3501.1

>prot_L-elsbetiae_contig14844.3501.1 ID=prot_L-elsbetiae_contig14844.3501.1|Name=mRNA_L-elsbetiae_contig14844.3501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=333bp
MALLKAGADFEASTLEGSTPLYMAAEGGQSAVVAALIETGANPDTRVPSG
GTPLSTAAARGHVGVVKILLDADASALLGSSNRHIADDIVPLDVAALKGH
SEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTG
VALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNARDLCGATPLMNATIT
FCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREK
KFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKN
KNKTTSNLLRMTLPTLRRRARRRGVVLTPLLR*
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mRNA from alignment at L-elsbetiae_contig14844:3118..4168+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14844.3501.1 ID=mRNA_L-elsbetiae_contig14844.3501.1|Name=mRNA_L-elsbetiae_contig14844.3501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1051bp|location=Sequence derived from alignment at L-elsbetiae_contig14844:3118..4168+ (Laminarionema elsbetiae ELsaHSoW15)
GCTGTTTGGGATAGGCATTCATTGGTGGTGATGGCGCTGCTAAAAGCCGG CGCAGACTTCGAAGCGAGTACTCTCGAAGGCTCTACACCGCTCTACATGG CGGCGGAGGGCGGGCAATCGGCTGTGGTAGCAGCGCTCATTGAGACAGGC GCGAATCCCGACACCCGGGTGCCCAGCGGAGGCACACCTTTGAGCACCGC AGCAGCCAGAGGACACGTGGGCGTCGTCAAGATACTCCTCGACGCCGACG CCAGTGCGCTATTGGGCAGTTCAAATCGGCACATTGCCGATGACATCGTC CCGCTGGACGTGGCGGCTCTCAAGGGGCACTCAGAGGTGGTACGCGAGCT GATCCAACAGCGGGGGGTCAAAGGTTGCGGCGGTGCAAGCGGTGGTGTGC AAGCTCTCGTTTTTGCTTCGGAGGAGCAACGTATGTACATCATGGCTACT TTGGTCGACGCCGGGGTGGTCGACACGGGCGTAGCTCTGTGCGGAGCAGC CAGATCTGGAAGCGAGACCCCCGTGAAATTCCTTTTGCAACGGCAAGAGG AGAAACCTGTCGGTTGGGACGCATACGTGAATGCCCGGGACCTTTGTGGC GCAACGCCCTTGATGAATGCTACCATTACTTTTTGCTGTTGCGCTCCCAG GGTTGTGCGTCTGCTCACTGATGCCGGAGCGGACACAACATCGGCCTTTG GGGCCACGAGAACTCCGGGCGGTATGGTGGAATTCATCGGGACCCCGCTC GCCCTGACGACTGATTGGCTCCGCGAGAAGAAATTTGAGGGTGAAGAACT CAAGGAGGAGCAACTCCACAGCCTGGAGCGCATTCGCCGCTTGCTGTTGC AGGTGGACGCTGTGCATGCGACGTCTTGGTTGTGGTACAGCGATGCCCCG TCCACCATCAGTGCTGCCGCCGAAAAAAACAAAAACAAGACCACGTCTAA TTTGCTGAGGATGACTTTGCCGACACTAAGGCGACGGGCGAGGAGGCGCG GTGTGGTGCTGACGCCACTGTTGAGGTAGAGGTGATGATGGGAGAGCAGG A
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14844:3118..4168+

>mRNA_L-elsbetiae_contig14844.3501.1 ID=mRNA_L-elsbetiae_contig14844.3501.1|Name=mRNA_L-elsbetiae_contig14844.3501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1998bp|location=Sequence derived from alignment at L-elsbetiae_contig14844:3118..4168+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGCTGCTAAAAGCCGGCGCAGACTTCGAAGCGAGTACTCTCGAAGG
CTCTACACCGCTCTACATGGCGGCGGAGGGCGGGCAATCGGCTGTGGTAG
CAGCGCTCATTGAGACAGGCGCGAATCCCGACACCCGGGTGCCCAGCGGA
GGCACACCTTTGAGCACCGCAGCAGCCAGAGGACACGTGGGCGTCGTCAA
GATACTCCTCGACGCCGACGCCAGTGCGCTATTGGGCAGTTCAAATCGGC
ACATTGCCGATGACATCGTCCCGCTGGACGTGGCGGCTCTCAAGGGGCAC
TCAGAGGTGGTACGCGAGCTGATCCAACAGCGGGGGGTCAAAGGTTGCGG
CGGTGCAAGCGGTGGTGTGCAAGCTCTCGTTTTTGCTTCGGAGGAGCAAC
GTATGTACATCATGGCTACTTTGGTCGACGCCGGGGTGGTCGACACGGGC
GTAGCTCTGTGCGGAGCAGCCAGATCTGGAAGCGAGACCCCCGTGAAATT
CCTTTTGCAACGGCAAGAGGAGAAACCTGTCGGTTGGGACGCATACGTGA
ATGCCCGGGACCTTTGTGGCGCAACGCCCTTGATGAATGCTACCATTACT
TTTTGCTGTTGCGCTCCCAGGGTTGTGCGTCTGCTCACTGATGCCGGAGC
GGACACAACATCGGCCTTTGGGGCCACGAGAACTCCGGGCGGTATGGTGG
AATTCATCGGGACCCCGCTCGCCCTGACGACTGATTGGCTCCGCGAGAAG
AAATTTGAGGGTGAAGAACTCAAGGAGGAGCAACTCCACAGCCTGGAGCG
CATTCGCCGCTTGCTGTTGCAGGTGGACGCTGTGCATGCGACGTCTTGGT
TGTGGTACAGCGATGCCCCGTCCACCATCAGTGCTGCCGCCGAAAAAAAC
AAAAACAAGACCACGTCTAATTTGCTGAGGATGACTTTGCCGACACTAAG
GCGACGGGCGAGGAGGCGCGGTGTGGTGCTGACGCCACTGTTGAGGTAGA
TGGCGCTGCTAAAAGCCGGCGCAGACTTCGAAGCGAGTACTCTCGAAGGC
TCTACACCGCTCTACATGGCGGCGGAGGGCGGGCAATCGGCTGTGGTAGC
AGCGCTCATTGAGACAGGCGCGAATCCCGACACCCGGGTGCCCAGCGGAG
GCACACCTTTGAGCACCGCAGCAGCCAGAGGACACGTGGGCGTCGTCAAG
ATACTCCTCGACGCCGACGCCAGTGCGCTATTGGGCAGTTCAAATCGGCA
CATTGCCGATGACATCGTCCCGCTGGACGTGGCGGCTCTCAAGGGGCACT
CAGAGGTGGTACGCGAGCTGATCCAACAGCGGGGGGTCAAAGGTTGCGGC
GGTGCAAGCGGTGGTGTGCAAGCTCTCGTTTTTGCTTCGGAGGAGCAACG
TATGTACATCATGGCTACTTTGGTCGACGCCGGGGTGGTCGACACGGGCG
TAGCTCTGTGCGGAGCAGCCAGATCTGGAAGCGAGACCCCCGTGAAATTC
CTTTTGCAACGGCAAGAGGAGAAACCTGTCGGTTGGGACGCATACGTGAA
TGCCCGGGACCTTTGTGGCGCAACGCCCTTGATGAATGCTACCATTACTT
TTTGCTGTTGCGCTCCCAGGGTTGTGCGTCTGCTCACTGATGCCGGAGCG
GACACAACATCGGCCTTTGGGGCCACGAGAACTCCGGGCGGTATGGTGGA
ATTCATCGGGACCCCGCTCGCCCTGACGACTGATTGGCTCCGCGAGAAGA
AATTTGAGGGTGAAGAACTCAAGGAGGAGCAACTCCACAGCCTGGAGCGC
ATTCGCCGCTTGCTGTTGCAGGTGGACGCTGTGCATGCGACGTCTTGGTT
GTGGTACAGCGATGCCCCGTCCACCATCAGTGCTGCCGCCGAAAAAAACA
AAAACAAGACCACGTCTAATTTGCTGAGGATGACTTTGCCGACACTAAGG
CGACGGGCGAGGAGGCGCGGTGTGGTGCTGACGCCACTGTTGAGGTAG
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