mRNA_L-elsbetiae_contig1482.3487.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI) HSP 1 Score: 308 bits (790), Expect = 8.790e-94 Identity = 157/193 (81.35%), Postives = 168/193 (87.05%), Query Frame = 1 Query: 1 RTMKLFQGCFGGEGGESATLEHLCRLLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHAKAHLLLQAHFDRCALPISDYVTDTRSVLDQAIRVMNAMLDIAAGFGLLETTLALLRLHQMVVQAAWEDADTLLQLPGVGAPQAARLRAAKGRXXXXXXXXXXXXXGVATLRDFALRGEASARKLLE 579 RTMKLFQ CFGG+GGESATLEHLCR+LSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPH K HLLLQAHFDRCALPISDYVTDTRSVLDQA+RV+NAMLDIAAGFGLLETTL LLRLHQMVVQAAWEDADTLLQ+PGVG QAARLR+ + V+TLR+ ALRGEA+A+ LLE Sbjct: 1981 RTMKLFQSCFGGDGGESATLEHLCRMLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHVKTHLLLQAHFDRCALPISDYVTDTRSVLDQAVRVINAMLDIAAGFGLLETTLGLLRLHQMVVQAAWEDADTLLQVPGVGPTQAARLRSKR----------------VSTLRELALRGEAAAKSLLE 2157
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Match: A0A7S3UVZ2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVZ2_HETAK) HSP 1 Score: 146 bits (368), Expect = 7.160e-41 Identity = 78/136 (57.35%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 67 LCRLLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHAKAHLLLQAHFDRCALPISDYVTDTRSVLDQAIRVMNAMLDIAAGFGLLETTLALLRLHQMVVQAAWEDADTLLQLPGVGAPQAARLRAAKG 474 L R+LS AQEFAELPVRHNED LN +L++ +PW LDSPH K LLLQAHF LPI+DYV DT+SVLDQA+RV+N ++DIAA GLL + L+RL QMVVQ + D L QLP V A A + A G Sbjct: 56 LARVLSGAQEFAELPVRHNEDRLNADLAQAVPWEADAYALDSPHTKTFLLLQAHFVGAELPIADYVNDTKSVLDQALRVLNGLVDIAADEGLLAAAVGLMRLSQMVVQGRLDTDDPLGQLPHVDAAVARAVARASG 191
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Match: A0A7S2BB24_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BB24_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.690e-40 Identity = 77/133 (57.89%), Postives = 99/133 (74.44%), Query Frame = 1 Query: 55 TLEHLCRLLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHAKAHLLLQAHFDRCALPISDYVTDTRSVLDQAIRVMNAMLDIAAGFGLLETTLALLRLHQMVVQAAWEDADTLLQLPGVGAPQAA 453 +L L ++L+D QEF ELPVRHNE++LN +L+ +LPW V LDSPH KA LLLQAHF +PISDY+ DT+SVLDQ++R++NAM+DIAA GLL + L L+RL QM+VQAA + L+QLPGV AA Sbjct: 191 SLPELVQVLADTQEFDELPVRHNEELLNEQLANELPWPVDMYALDSPHTKAALLLQAHFVHAPMPISDYINDTKSVLDQSLRILNAMVDIAADEGLLGSALDLMRLSQMIVQAAMPEDSDLMQLPGVDEQAAA 323
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Match: A0A835Z6M6_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M6_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.240e-39 Identity = 81/135 (60.00%), Postives = 99/135 (73.33%), Query Frame = 1 Query: 31 GGEGGESATLEHLCRLLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHAKAHLLLQAHFDRCALPISDYVTDTRSVLDQAIRVMNAMLDIAAGFGLLETTLALLRLHQMVVQAAWEDADTLLQLPGV 435 GG+ +S + E LCR+L+DA+EFAELPVRHNEDVLN EL+ +LPWAV + + KA+LLLQAH R LPISDY DT+SVLDQA RV+NA++D AA GLL TL L+RL Q ++ A AD LLQLPGV Sbjct: 1215 GGDDDDSDSAE-LCRILADAREFAELPVRHNEDVLNAELAAELPWAVDAARVGEANTKAYLLLQAHMCRAPLPISDYANDTKSVLDQAPRVLNALVDTAALLGLLSPTLRLMRLSQCLLAAILPGADPLLQLPGV 1348
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Match: A0A7S0PZ95_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZ95_9EUKA) HSP 1 Score: 147 bits (372), Expect = 2.490e-38 Identity = 76/144 (52.78%), Postives = 97/144 (67.36%), Query Frame = 1 Query: 4 TMKLFQGCFGGEGGESATLEHLCRLLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHAKAHLLLQAHFDRCALPISDYVTDTRSVLDQAIRVMNAMLDIAAGFGLLETTLALLRLHQMVVQAAWEDADTLLQLPGV 435 T+ LF L HL R+L DA E+ ELPVRHNE+++N L++KLPW V ++ DSPH KA LLLQAHF R ALP+SDYVTD +SVLDQA+R++ AM+DIAA G L T L+ + L QMV Q + D+ L LPG+ Sbjct: 371 TVALFNAELHDVDDAPTELPHLLRVLCDASEYDELPVRHNEEIVNATLAEKLPWQVDSQTFDSPHTKAQLLLQAHFCRSALPMSDYVTDLKSVLDQALRILQAMVDIAADGGWLYTALSAMHLTQMVSQGRFVDSSQLGDLPGI 514
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Match: A0A812DLF8_SEPPH (ASCC3 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812DLF8_SEPPH) HSP 1 Score: 143 bits (360), Expect = 2.620e-37 Identity = 76/145 (52.41%), Postives = 99/145 (68.28%), Query Frame = 1 Query: 1 RTMKLFQGCFGGEGGESATLEHLCRLLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHAKAHLLLQAHFDRCALPISDYVTDTRSVLDQAIRVMNAMLDIAAGFGLLETTLALLRLHQMVVQAAWEDADTLLQLPGV 435 +T+K+FQ E E + ++ L +LS AQE+AELPVRHNED LN +L+K++P V + DS H K HLLLQAHF LP SDY TDT+SVLDQAIR++ AMLD A G + T+L ++ L QMV+Q W + +TLL LP V Sbjct: 82 KTVKMFQE----ELNEKSGIKELLNILSKAQEYAELPVRHNEDQLNSDLAKQVPLEVNSHTFDSSHTKTHLLLQAHFSGITLPSSDYYTDTKSVLDQAIRILQAMLDTCADQGWVVTSLYVINLLQMVIQGHWCNKNTLLTLPHV 222
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Match: A0A1Y1IBL7_KLENI (DEAD/DEAH box helicase domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBL7_KLENI) HSP 1 Score: 146 bits (369), Expect = 3.420e-37 Identity = 83/158 (52.53%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 4 TMKLFQGCFGGEGGESATL-EHLCRLLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHAKAHLLLQAHFDRCALPISDYVTDTRSVLDQAIRVMNAMLDIAAGFGLLETTLALLRLHQMVVQAAWEDADTLLQLPGVGAPQAARLRAAKG 474 TM LF + TL + + R+L A E+ ELPVRHNED LN EL+ + W V LD PH KA+LLLQAHF R ALP+SDY+TDT+SVLDQ+IR++ AM+DIAA G L TTL ++ QMV+Q AW D LL LP V A +L AA+G Sbjct: 1853 TMTLFSAAIRAD-----TLHQEVLRILCGASEYDELPVRHNEDKLNAELAGVVRWPVDARALDDPHIKANLLLQAHFSRLALPVSDYITDTKSVLDQSIRILQAMVDIAAHGGWLATTLHVMHTLQMVLQGAWHDESALLFLPHVTA-DVVQLLAARG 2004
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Match: A0A7I8W1X8_9ANNE (DgyrCDS10545 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W1X8_9ANNE) HSP 1 Score: 145 bits (367), Expect = 6.110e-37 Identity = 77/156 (49.36%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 4 TMKLFQGCFGGEGGESATLEHLCRLLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHAKAHLLLQAHFDRCALPISDYVTDTRSVLDQAIRVMNAMLDIAAGFGLLETTLALLRLHQMVVQAAWEDADTLLQLPGVGA---PQAARLR 462 TMK+F + LE L +LS+ QE+AELPVRHNED LN +L++ LP ++ + +DS H KAHLLLQAHF LP SDY TDT+SV+DQAIR++ AMLD AG G L T++ ++ L QM++QA W + TLL LP + + P+ A L+ Sbjct: 1020 TMKMFDEKLNS----NCELEDLIEILSNCQEYAELPVRHNEDKLNSDLAQDLPISLASHAMDSSHTKAHLLLQAHFSHANLPCSDYATDTKSVMDQAIRILQAMLDTCAGQGWLVTSIRIINLIQMIIQARWLNDSTLLVLPHIDSRILPKLAMLK 1171
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Match: A0A7S0NSC9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NSC9_9EUKA) HSP 1 Score: 145 bits (365), Expect = 1.130e-36 Identity = 77/136 (56.62%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 58 LEHLCRLLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHAKAHLLLQAHFDRCALPISDYVTDTRSVLDQAIRVMNAMLDIAAGFGLLETTLALLRLHQMVVQAAWEDADTLLQLPGVGAPQAARLRA 465 L L R+L A E+ ELPVRHNE+ +N L++KLPW V + DSPH KA LLLQAHF R LP+SDYVTD +SVLDQA+R++ AM+DIAA G L T L+ + L QMV Q + DA LL LPGV AA L A Sbjct: 1040 LPRLLRVLCAASEYDELPVRHNEESVNAALAEKLPWDVDSRSFDSPHTKAELLLQAHFSRARLPMSDYVTDLKSVLDQALRILQAMVDIAADGGWLYTALSAMHLTQMVSQGRFVDAPQLLDLPGVDEECAAALAA 1175
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Match: A7RPC5_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RPC5_NEMVE) HSP 1 Score: 145 bits (365), Expect = 1.180e-36 Identity = 78/173 (45.09%), Postives = 105/173 (60.69%), Query Frame = 1 Query: 55 TLEHLCRLLSDAQEFAELPVRHNEDVLNGELSKKLPWAVGTEELDSPHAKAHLLLQAHFDRCALPISDYVTDTRSVLDQAIRVMNAMLDIAAGFGLLETTLALLRLHQMVVQAAWEDADTLLQLPGVGAPQAARLRAAKGRXXXXXXXXXXXXXGVATLRDFALRGEASARKL 573 +L L +LS+A E++ELPVRHNED +N +L+K+LP V DS H K +LL QAHF R ALP SDY TD +SVLDQAIR++ AM+D+AA G L T L ++ + QMVVQA W +LL LPG+ A + R G ++ D ALRG S++++ Sbjct: 1846 SLPDLLEVLSEAHEYSELPVRHNEDAINSDLAKELPLEVNPHTFDSAHTKTNLLFQAHFSRLALPSSDYFTDQKSVLDQAIRILQAMIDVAADEGWLATALRIMHVGQMVVQARWLHDCSLLTLPGIQAQHLSGFRRPNGDQIQSLPELVHAVSARKSILDNALRGMVSSQEI 2018 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1482.3487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1482.3487.1 >prot_L-elsbetiae_contig1482.3487.1 ID=prot_L-elsbetiae_contig1482.3487.1|Name=mRNA_L-elsbetiae_contig1482.3487.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=191bp MKLFQGCFGGEGGESATLEHLCRLLSDAQEFAELPVRHNEDVLNGELSKKback to top mRNA from alignment at L-elsbetiae_contig1482:13700..18717+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1482.3487.1 ID=mRNA_L-elsbetiae_contig1482.3487.1|Name=mRNA_L-elsbetiae_contig1482.3487.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5018bp|location=Sequence derived from alignment at L-elsbetiae_contig1482:13700..18717+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1482:13700..18717+ >mRNA_L-elsbetiae_contig1482.3487.1 ID=mRNA_L-elsbetiae_contig1482.3487.1|Name=mRNA_L-elsbetiae_contig1482.3487.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1146bp|location=Sequence derived from alignment at L-elsbetiae_contig1482:13700..18717+ (Laminarionema elsbetiae ELsaHSoW15)back to top |