mRNA_L-elsbetiae_contig14806.3483.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Match: C9K4U6_SACJA (Unconventional myosin n=1 Tax=Saccharina japonica TaxID=88149 RepID=C9K4U6_SACJA) HSP 1 Score: 135 bits (339), Expect = 2.390e-35 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 2 Query: 2 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFDC 196 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFDC Sbjct: 1256 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFDC 1320
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Match: A0A6H5LE99_9PHAE (Myosin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LE99_9PHAE) HSP 1 Score: 133 bits (335), Expect = 8.290e-35 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2 Query: 2 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFDC 196 AFVLNFHGRVTQASVKNFQLVVQGD TEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFDC Sbjct: 1276 AFVLNFHGRVTQASVKNFQLVVQGDVTEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFDC 1340
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Match: A0A835YUJ6_9STRA (Tub domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ6_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.860e-22 Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 2 Query: 2 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFD 193 A+VLNF+GRVTQASVKNFQLV D E+I LQFGRT + FTMDF +PLSPLQA AITLTSF+ Sbjct: 210 AYVLNFNGRVTQASVKNFQLVESDDTAEKIRLQFGRTSKDSFTMDFTYPLSPLQAFAITLTSFE 273
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Match: UPI000661F613 (tubby-related protein 2 n=1 Tax=Cavia porcellus TaxID=10141 RepID=UPI000661F613) HSP 1 Score: 87.0 bits (214), Expect = 3.740e-19 Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 2 Query: 2 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFD 193 AFVLNFHGRVTQASVKNFQ++ + +++ LQFGR + FTMDFC PLSPLQA AI L+SFD Sbjct: 212 AFVLNFHGRVTQASVKNFQIIYP-NKPDKVVLQFGRMGPDTFTMDFCFPLSPLQAFAICLSSFD 274
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Match: A0A7S1BGR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGR2_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 5.300e-19 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 2 Query: 2 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFD 193 A+VLNF+GRVT ASVKNFQLV + + T++I LQFGR +EFTMDF PLSPLQA A TLTSFD Sbjct: 122 AYVLNFNGRVTMASVKNFQLVDE-ENTDKIILQFGRVAKDEFTMDFQWPLSPLQAFATTLTSFD 184
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Match: A0A6J1XN18_ACIJB (Tubby-like protein n=7 Tax=Felidae TaxID=9681 RepID=A0A6J1XN18_ACIJB) HSP 1 Score: 86.3 bits (212), Expect = 2.880e-18 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 2 Query: 2 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFD 193 A+VLNFHGRVT+ASVKNFQ +V D T+ + LQFGR + FTMDFC PL PLQA AI L+SFD Sbjct: 379 AYVLNFHGRVTRASVKNFQ-IVHPDDTDALVLQFGRVAPDTFTMDFCFPLCPLQAFAICLSSFD 441
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Match: A0A482R6S1_9EURY (Tub domain-containing protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482R6S1_9EURY) HSP 1 Score: 79.3 bits (194), Expect = 3.400e-18 Identity = 41/62 (66.13%), Postives = 48/62 (77.42%), Query Frame = 2 Query: 8 VLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFD 193 +LNF+GRVT ASVKNFQ+V DA + + LQFGR T+EFTMDF PLSPLQA I L+SFD Sbjct: 1 MLNFNGRVTMASVKNFQMV-SPDAQDSVLLQFGRVSTDEFTMDFQWPLSPLQAFQICLSSFD 61
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Match: A0A6P6DR40_OCTDE (tubby-related protein 2 n=1 Tax=Octodon degus TaxID=10160 RepID=A0A6P6DR40_OCTDE) HSP 1 Score: 85.9 bits (211), Expect = 4.030e-18 Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 2 Query: 2 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFD 193 AFVLNFHGRVT+ASVKNFQ++ + +++ LQFGR N FTMDFC PL PLQA AI L+SFD Sbjct: 385 AFVLNFHGRVTRASVKNFQIIYP-NKPDKVVLQFGRVAPNTFTMDFCFPLCPLQAFAICLSSFD 447
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Match: A0A822I2W1_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822I2W1_9NEOB) HSP 1 Score: 80.5 bits (197), Expect = 5.080e-18 Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 2 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFD 193 ++VLNFHGRVTQASVKNFQ ++ D E I +QFGR + FTMDF HPL LQA +I L+SFD Sbjct: 54 SYVLNFHGRVTQASVKNFQ-IISTDDPEHIVMQFGRVAEDVFTMDFSHPLCALQAFSICLSSFD 116
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Match: A0A7S3Y0Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0Z9_HETAK) HSP 1 Score: 83.6 bits (205), Expect = 5.420e-18 Identity = 42/64 (65.62%), Postives = 51/64 (79.69%), Query Frame = 2 Query: 2 AFVLNFHGRVTQASVKNFQLVVQGDATEQITLQFGRTHTNEFTMDFCHPLSPLQALAITLTSFD 193 A+VLNF+GRVT ASVKNFQL+ +G+ E + LQFGR ++FTMDF PLSP QA AITL+SFD Sbjct: 188 AYVLNFNGRVTMASVKNFQLI-EGERPEDVLLQFGRVAKDKFTMDFQWPLSPFQAFAITLSSFD 250 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14806.3483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14806.3483.1 >prot_L-elsbetiae_contig14806.3483.1 ID=prot_L-elsbetiae_contig14806.3483.1|Name=mRNA_L-elsbetiae_contig14806.3483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=66bp GVRAEFPREGDPGLGEELPAGGAGRRHGADHAAVREDAHQRVHHGLLPSPback to top mRNA from alignment at L-elsbetiae_contig14806:3638..4230+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14806.3483.1 ID=mRNA_L-elsbetiae_contig14806.3483.1|Name=mRNA_L-elsbetiae_contig14806.3483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=593bp|location=Sequence derived from alignment at L-elsbetiae_contig14806:3638..4230+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14806:3638..4230+ >mRNA_L-elsbetiae_contig14806.3483.1 ID=mRNA_L-elsbetiae_contig14806.3483.1|Name=mRNA_L-elsbetiae_contig14806.3483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=396bp|location=Sequence derived from alignment at L-elsbetiae_contig14806:3638..4230+ (Laminarionema elsbetiae ELsaHSoW15)back to top |