mRNA_L-elsbetiae_contig1480.3479.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: A0A6H5KX94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX94_9PHAE) HSP 1 Score: 322 bits (824), Expect = 8.190e-105 Identity = 216/403 (53.60%), Postives = 243/403 (60.30%), Query Frame = 1 Query: 1 MALVPFSYASPFTDQLQLPERLFTIGDRLLKIRQAWKGDGKGGTDIGYGASVYPAAYVLAEYIERNPHLVRGKRVIELG*FPSRLWSMPCP-GATDVCLTDGDEQSLKLAQENVDANLLQPLPCRQGPRTP---------APAGRDPQRQTLDASSTRHSDSDVVSEHVGTSHDAAGGGPGGRRKPSECSATISVRKLRWGREDDMRAACFPG-GDGDTGSSSDDSGGCCPWDVVLGSDIAALPYASAYGDLLRTIVSLVNSGKSDGGEGDKVSLPSPRE--AD---GAQE-------------EAINGDTRECEE----------------ETNRRG---DXXXXXXXXXAHKRRHVSEEAFFEDLKEKLGGEKSVREMGEDDIHADFRGTGIRLHMFEVDV 1065 MALV SYASPFTDQLQL ERLFTI +LLKI+QAWKGDGKGGTDIG+GASVYPAAYVLAEY+ER+P+LVRGKRVIELG L GA +VCLTDGDE+SLKL Q NV NL P CR+ P T A D +R +A ST S + V S P RR P +AT+SV++LRWG DDM A P GDGD+GS WDVVLGSDIAALPYASAYGDLL+TIVSLVN +DG DK + PSP AD GA + E ++G RE E R G + AHKRRH+SEEAFFEDLKE+LGGE+SVR EDDIH DFRGTGIRLHMF VDV Sbjct: 1 MALVLHSYASPFTDQLQLRERLFTIDGKLLKIQQAWKGDGKGGTDIGFGASVYPAAYVLAEYLERHPYLVRGKRVIELGTGTGFLGIAAATLGAAEVCLTDGDEESLKLTQRNVTGNLS-PAVCRRSPSTASCCDQQQAQAVTAADKERTPCNADSTAGSTNIVES-------------PVDRRPPLATAATVSVQQLRWGCADDMHAVGVPRRGDGDSGSPR-------AWDVVLGSDIAALPYASAYGDLLQTIVSLVNI--TDGSGQDKHTAPSPPRTIADHVTGADQNTEISSTAAPDSCEPLDGSGRESGTGKPAITKTSAMKGVMAEAGRSGSEREGRRQVVVLLAHKRRHISEEAFFEDLKEELGGERSVRGTSEDDIHPDFRGTGIRLHMFVVDV 380
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: D7FHI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI4_ECTSI) HSP 1 Score: 318 bits (815), Expect = 3.220e-103 Identity = 217/422 (51.42%), Postives = 246/422 (58.29%), Query Frame = 1 Query: 1 MALVPFSYASPFTDQLQLPERLFTIGDRLLKIRQAWKGDGKGGTDIGYGASVYPAAYVLAEYIERNPHLVRGKRVIELG*---FPSRL--------WSMPCPGATDVCLTDGDEQSLKLAQENVDANLLQPLPCRQGPRTPAPAGRDPQRQTLDASSTRHSDSDVVSEHVGTSHDAAGGGPGG------RRKP-------SECSATISVRKLRWGREDDMRAACFP-GGDGDTGSSSDDSGGCCPWDVVLGSDIAALPYASAYGDLLRTIVSLVNSGKSDG------------------GEGDKVSLPSPREADGAQEEAINGDT------------------------RECEEETNRRGDXXXXXXXXXAHKRRHVSEEAFFEDLKEKLGGEKSVREMGEDDIHADFRGTGIRLHMFEVDV 1065 MALV SYASPFTDQLQL ER FTI +LLKI+QAWKGDGKGGTDIG+GASVYPAAYVLAEY+ER+P+LVRGKRVIELG P+R M GA +VCLTDGDE+SLKL Q NV NL QP R R+P+ A Q+Q DA++ E G + D+ GG RR P S +ATISV+KLRWG DDM AA P GGDGD+GSS WDVVLGSDIAALPYASAYGDLL+TIVSLVN+ K G GE + + +D EA++G R E RR AHKRRHVSEEAFFEDL+E+LGGE+SVR EDDIH DFRGTGIRLHMF VDV Sbjct: 1 MALVLHSYASPFTDQLQLKERFFTIDGKLLKIQQAWKGDGKGGTDIGFGASVYPAAYVLAEYLERHPYLVRGKRVIELGGCCAIPARAALFAALQYHCMTFKGAAEVCLTDGDEESLKLTQRNVTDNL-QPDFSR---RSPSTASCCDQQQAQDATAAEE-------ERTGCNADSKGGSTNSVESSADRRPPQATAATISATAATISVQKLRWGCADDMHAAGVPLGGDGDSGSSR-------AWDVVLGSDIAALPYASAYGDLLQTIVSLVNNTKGSGQVSHTAPSPPRTISDHVTGEDQNTEISNTAASDSC--EALDGSGCESGRGEPAIIKTSPMKGLMADAGRSRSERAGRR-----RVVVLLAHKRRHVSEEAFFEDLREELGGERSVRGTSEDDIHPDFRGTGIRLHMFVVDV 397
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: A0A7S2XUW0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUW0_9STRA) HSP 1 Score: 119 bits (297), Expect = 6.690e-28 Identity = 61/117 (52.14%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 4 ALVPFSYASPFTDQLQLPERLFTIGDRLLKIRQAWKGDGKGGTDIGYGASVYPAAYVLAEYIERNPHLVRGKRVIELG*FPSRLW-SMPCPGATDVCLTDGDEQSLKLAQENVDANL 351 A+V FS AS FTD QLP R F IGD +++ Q WK DGKGGT +G+GA+VY AA+VL+EY+ RN L+ G+RV+ELG P + + GA+ V TDGDE + LA+ N+ ANL Sbjct: 9 AIVVFSQASSFTDTKQLPSRSFQIGDHFVQLEQRWKNDGKGGTTLGHGATVYNAAFVLSEYLARNRPLLEGQRVVELGTGPGLVAIAAALHGASQVIATDGDEDVVDLARCNIQANL 125
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: A0A8K1C253_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C253_PYTOL) HSP 1 Score: 107 bits (268), Expect = 1.270e-23 Identity = 81/251 (32.27%), Postives = 109/251 (43.43%), Query Frame = 1 Query: 4 ALVPFSYASPFTDQLQLPERLFTIGDRLLKIRQAWKGDGKGGTDIGYGASVYPAAYVLAEYIERNPHLVRGKRVIELG*FPSRLWSMPCPGATD-VCLTDGDEQSLKLAQENVDANLLQPLPCRQGPRTPAPAGRDPQRQTLDASSTRHSDSDVVSEHVGTSHDAAGGGPGGRRKPSECSATISVRKLRWGREDDMRAACFPGGDGDTGSSSDDSGGCCPWDVVLGSDIAALPYASAYGDLLRTIVSLVNS 753 ALVPFS+ +PF D L+ R F I R + IRQ WK DGKGGT +G+GASVY AA L+ Y+E + LVR KRVIELG P + + D V +TDGD S+ L N++ N L+ C + +E++ WG E T D+ P+DVV+G+DI A PYA A+ LLR + L ++ Sbjct: 28 ALVPFSFRNPFHDALRDEIRRFPIAKRQIMIRQGWKNDGKGGTTLGFGASVYDAAIALSLYLEAHCDLVRNKRVIELGCGPGLVGIVAAHLQADQVVVTDGDPASVHLTAANIELNELEKPQC------------------------------IATEYL------------------------------WGDE--------------TNGVLQDA----PYDVVVGADIVACPYADAFDALLRAFLQLTDA 200
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: A0A0N7L683_PLAHL (Predicted methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L683_PLAHL) HSP 1 Score: 106 bits (264), Expect = 5.020e-23 Identity = 75/245 (30.61%), Postives = 104/245 (42.45%), Query Frame = 1 Query: 4 ALVPFSYASPFTDQLQLPERLFTIGDRLLKIRQAWKGDGKGGTDIGYGASVYPAAYVLAEYIERNPHLVRGKRVIELG*FPSRLWSMPCP-GATDVCLTDGDEQSLKLAQENVDANLLQPLPCRQGPRTPAPAGRDPQRQTLDASSTRHSDSDVVSEHVGTSHDAAGGGPGGRRKPSECSATISVRKLRWGREDDMRAACFPGGDGDTGSSSDDSGGCCPWDVVLGSDIAALPYASAYGDLLRTI 735 ALVPFS+ +PF + LQ R F I + ++I QAW+ DG+GGT +GYGASVY AA L+ Y+ +P LV+G R+IELG P + + V +TDGD S+ L Q NV N L C +V K WG + + P+DV++G+DI A PYASA+ +L+RT+ Sbjct: 27 ALVPFSFHNPFHNALQDATRWFPIAGKAIRIDQAWQSDGRGGTTLGYGASVYDAAIALSLYLVDHPDLVKGNRIIELGCGPGLVGVVAAHLEPKSVVITDGDSASVALTQHNVHLNNLSADIC------------------------------------------------------------TVEKYIWGDLEHHLVSMH-----------------APYDVIIGADIVACPYASAFKELMRTL 194
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: H3HDA5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDA5_PHYRM) HSP 1 Score: 103 bits (257), Expect = 5.910e-23 Identity = 54/116 (46.55%), Postives = 74/116 (63.79%), Query Frame = 1 Query: 4 ALVPFSYASPFTDQLQLPERLFTIGDRLLKIRQAWKGDGKGGTDIGYGASVYPAAYVLAEYIERNPHLVRGKRVIELG*FPSRLWSMPCP-GATDVCLTDGDEQSLKLAQENVDAN 348 ALVPFS+ +PF D LQ R F I + ++I QAW+GDG+GGT +G+GASVY AA L+ Y+ + LV+G RV+ELG P + + V +TDGD S++L Q N+ AN Sbjct: 24 ALVPFSFRNPFHDALQDATRWFPIAGKRIRIDQAWQGDGRGGTALGFGASVYDAAIALSLYLAAHRDLVKGNRVVELGCGPGLVGVVAAHLEPKSVVITDGDPASVELTQRNIKAN 139
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: A0A2D4CGG4_PYTIN (Uncharacterized protein (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGG4_PYTIN) HSP 1 Score: 104 bits (260), Expect = 8.410e-23 Identity = 59/128 (46.09%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 4 ALVPFSYASPFTDQLQLPERLFTIGDRLLKIRQAWKGDGKGGTDIGYGASVYPAAYVLAEYIERNPHLVRGKRVIELG*FPSRLWSMPCP-GATDVCLTDGDEQSLKLAQENVDANLLQP-LPCRQGP 381 ALVPFS+ +P+ D L+ R F I DR + I+QAW+ DGKGGT IG+GASVY AA L+ +++ + LV+GKRVIELG P + + A V +TDGD+ S+ L N+ N L CR P Sbjct: 20 ALVPFSFLNPYHDALRDELRRFPIADRQILIQQAWQPDGKGGTAIGFGASVYDAAIALSLFLDSHRDLVQGKRVIELGCGPGLVGIVAAHLNAASVLVTDGDDASVALTATNISRNSLDADARCRAAP 147
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: W2NJ79_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2NJ79_PHYPR) HSP 1 Score: 105 bits (261), Expect = 1.370e-22 Identity = 54/123 (43.90%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 4 ALVPFSYASPFTDQLQLPERLFTIGDRLLKIRQAWKGDGKGGTDIGYGASVYPAAYVLAEYIERNPHLVRGKRVIELG*FPSRLWSMPCP-GATDVCLTDGDEQSLKLAQENVDANLLQPLPC 369 ALVPFS+ +PF D L+ R F I + ++I QAW+ DG+GGT +G+GASVY AA L+ Y+ +P LV+GKRV+ELG P + + + +TDGD S+ L Q N++ N L C Sbjct: 31 ALVPFSFRNPFHDALRDATRWFPIAGKRIRIDQAWQSDGRGGTTLGFGASVYDAAIALSLYLAAHPDLVKGKRVVELGCGPGLVGVVAAHLQPKSIVVTDGDPASVALTQHNIEVNELSKEIC 153
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: A0A7S0P9Z1_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0P9Z1_CAFRO) HSP 1 Score: 106 bits (264), Expect = 1.960e-22 Identity = 87/261 (33.33%), Postives = 122/261 (46.74%), Query Frame = 1 Query: 7 LVPFSYASPFTDQLQLPERLFTIGDRLLKIRQAWKGDGKGGTDIGYGASVYPAAYVLAEYI-ERNPHLVRGKRVIELG*FPS-RLWSMPCPGATDVCLTDGDEQSLKLAQENVDANLLQPLPCRQGPRTPAPAGRDPQRQTLDASSTRHSDSDVVSEHVGTSHDAAGGGPGGRRKPSECSATISVRKLRWGREDDMRAACFPGGDGDTGSSSDDSGGCCPWDVVLGSDIAALPYASAYGDLLRTIVSLVNSGKSDGGEGDK 783 LVPFS +SPFTD L+LPER ++ +I Q W+ DG+GGT +G+GASVYPAA VLA+++ + P +R + V+ELG + GA V TDGD ++++L + N A L+ L HSD + VG + R+L WG D A T ++ + GG DVV+G+DIAA PYA+A L RTI L+ S G E ++ Sbjct: 43 LVPFSLSSPFTDHLRLPERTLSLRGCEFRIEQGWEADGRGGTTLGFGASVYPAAIVLADFLLQLGPRRLRRRNVLELGCGVGLSAIAAARAGAARVLATDGDAKAVELCKRN-SARHLEGL---------------------------HSDRGAPTWRVGK---------------------LEARQLLWG---DHSA---------TEEATAEMGGV---DVVIGADIAACPYAAALEALARTISQLLGSTPISGPEAER 239
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: A0A5D6Y5E6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5E6_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.660e-22 Identity = 84/249 (33.73%), Postives = 113/249 (45.38%), Query Frame = 1 Query: 4 ALVPFSYASPFTDQLQLPERLFTIGDRLLKIRQAWKGDGKGGTDIGYGASVYPAAYVLAEYIERNPHLVRGKRVIELG*FPSRLW-SMPCPGATDVCLTDGDEQSLKLAQENVDANLLQPLPCRQGPRTPAPAGRDPQRQTLDASSTRHSDSDVVSEHVGTSHDAAGGGPGGRRKPSECSATISVRKLRWGREDDMRAACFPGGDGDTGSSSDDSGGCCPWDVVLGSDIAALPYASAYGDLLRTIVSLV 747 ALV FSY +PF D L+ R F + R ++I Q W+ DG+GGT +G+GASVY A+ LA ++E + H VRG+RVIELG P + GA+ V LTDGD S++LA+ NV+ N L AT R+ WG D M G D D +D+ +DVVLG+DI A PYA A+ LL ++ +LV Sbjct: 660 ALVAFSYRNPFHDALRDATRWFPLAGRRVQIAQGWRADGRGGTRLGFGASVYDASVALALFLESHDHHVRGRRVIELGCGPGLAGIAAGVLGASSVLLTDGDAGSVELAKRNVELNAL-------------------------------------------------------------GATCRARQYLWG--DPM----VVGDDKD-----EDTPAPTAFDVVLGADIVACPYAEAFEALLVSLRALV 836 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1480.3479.1 >prot_L-elsbetiae_contig1480.3479.1 ID=prot_L-elsbetiae_contig1480.3479.1|Name=mRNA_L-elsbetiae_contig1480.3479.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=269bp MPCPGATDVCLTDGDEQSLKLAQENVDANLLQPLPCRQGPRTPAPAGRDPback to top mRNA from alignment at L-elsbetiae_contig1480:5490..7588+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1480.3479.1 ID=mRNA_L-elsbetiae_contig1480.3479.1|Name=mRNA_L-elsbetiae_contig1480.3479.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2099bp|location=Sequence derived from alignment at L-elsbetiae_contig1480:5490..7588+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1480:5490..7588+ >mRNA_L-elsbetiae_contig1480.3479.1 ID=mRNA_L-elsbetiae_contig1480.3479.1|Name=mRNA_L-elsbetiae_contig1480.3479.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1614bp|location=Sequence derived from alignment at L-elsbetiae_contig1480:5490..7588+ (Laminarionema elsbetiae ELsaHSoW15)back to top |