prot_L-elsbetiae_contig1030.347.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1030.347.1
Unique Name	prot_L-elsbetiae_contig1030.347.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	88

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig1030.347.1 vs. uniprot
Match: D7FYY0_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY0_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 2.890e-43
Identity = 69/86 (80.23%), Postives = 75/86 (87.21%), Query Frame = 0

Query:    1 MITTAAREGKKKITPYMPQEGVGGMVYHGFVVCLVSLTVNYLVIPFQVLGLEESLDVWGTFYFGIHALVVGLYVVCLVIPTKKVSN 86
            MITTAAREGKKKI+PYMPQEG  GM YHG  V LV+LTVNYLVIPFQ+LGL ESLDVWGTF FGIHALVVGLY+VC +IPTKK  +
Sbjct:    1 MITTAAREGKKKISPYMPQEGAAGMAYHGLCVFLVTLTVNYLVIPFQLLGLTESLDVWGTFSFGIHALVVGLYLVCQMIPTKKAQS 86

[Close]

BLAST of mRNA_L-elsbetiae_contig1030.347.1 vs. uniprot
Match: A0A6H5JJU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU3_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.920e-38
Identity = 68/86 (79.07%), Postives = 74/86 (86.05%), Query Frame = 0

Query:    1 MITTAAREGKKKITPYMPQEGVGGMVYHGFVVCLVSLTVNYLVIPFQVLGLEESLDVWGTFYFGIHALVVGLYVVCLVIPTKKVSN 86
            MITTAAREGKKKI+PYMPQEG  GM YHG  V LV+LTVNYLVIPFQ+LGL ESLDVWGTF FGIHALV+ LY+VC VIPTKK  +
Sbjct:  418 MITTAAREGKKKISPYMPQEGAAGMAYHGLCVFLVTLTVNYLVIPFQLLGLTESLDVWGTFSFGIHALVIALYLVCQVIPTKKAQS 503

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1030.347.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1030.347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FYY0_ECTSI	2.890e-43	80.23	Acyltransferase n=1 Tax=Ectocarpus siliculosus Tax...	[more]
A0A6H5JJU3_9PHAE	1.920e-38	79.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..41
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 42..60
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 80..87
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 61..79
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	TMHMM	TMhelix		coord: 21..43
None	No IPR available	TMHMM	TMhelix		coord: 58..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1030	contig	L-elsbetiae_contig1030:1154..2249 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1030.347.1	mRNA_L-elsbetiae_contig1030.347.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1030 1154..2249 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1030.347.1 ID=prot_L-elsbetiae_contig1030.347.1|Name=mRNA_L-elsbetiae_contig1030.347.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=88bp
MITTAAREGKKKITPYMPQEGVGGMVYHGFVVCLVSLTVNYLVIPFQVLG
LEESLDVWGTFYFGIHALVVGLYVVCLVIPTKKVSNP*