mRNA_L-elsbetiae_contig1478.3465.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Match: A0A6H5L2U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U5_9PHAE) HSP 1 Score: 229 bits (585), Expect = 1.310e-69 Identity = 121/134 (90.30%), Postives = 125/134 (93.28%), Query Frame = 2 Query: 56 AGEEGAAXTGAGAGMPEPPVEPVPEKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTMIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 457 AG+EG T GMP+PPVEP+ EKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDG KAGAWVGVGYT+IGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ Sbjct: 82 AGDEGE--TEVAVGMPKPPVEPLQEKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGSKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 213
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Match: D7FSA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA6_ECTSI) HSP 1 Score: 226 bits (576), Expect = 9.120e-69 Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 2 Query: 56 AGEEGAAXTGAGAGMPEPPVEPVPEKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTMIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE 454 AG+EG T GMP+PPVEP EK+NLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDG KAGAWVGVGYT+IGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE Sbjct: 48 AGDEG--DTEVAVGMPKPPVEPTQEKNNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGSKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE 178
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Match: A0A836CJ19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ19_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.330e-39 Identity = 73/109 (66.97%), Postives = 93/109 (85.32%), Query Frame = 2 Query: 128 EKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTMIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE 454 +K LPF+LDPSTRGGAVVVP LS+LLP+ AY LT+ G+DG KAG +V V Y ++G++ W G+YFFRVATKNMTYA QL++YEQAVI+KRF EL+E+EV+ALLDE++E Sbjct: 8 KKGGLPFWLDPSTRGGAVVVPVLSVLLPIAAYFVLTSQGMDGLKAGNYVTVTYILLGMVGWAGTYFFRVATKNMTYAQQLRDYEQAVIQKRFEELQEDEVEALLDEIDE 116
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Match: A0A7S3XNX5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNX5_HETAK) HSP 1 Score: 116 bits (291), Expect = 1.190e-26 Identity = 56/110 (50.91%), Postives = 83/110 (75.45%), Query Frame = 2 Query: 128 EKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTMIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 457 E++ LP+ L+P+T+GG++VV LSL+ P+GAY AL A G+D AG +VGVG+ ++ + W +Y FRVATK+MTYA QLK+YE AV+ KR EL+++EV AL++E+ + Sbjct: 96 ERAGLPWILNPNTKGGSLVVAALSLVFPVGAYYALQAGGMDELDAGRYVGVGFVVVSCVLWTATYLFRVATKDMTYAQQLKDYENAVLAKRLEELQDDEVQALIEEIERE 205
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Match: A0A7S2YJT9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJT9_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.580e-25 Identity = 59/112 (52.68%), Postives = 83/112 (74.11%), Query Frame = 2 Query: 116 EPVPEKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTMIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 448 EP PEK++LPF+LDP T+GGAVV+ + + P+ Y + AV +D + G +GVG+T++ L+ W+ +Y FRVATK+MTYA QLK+YE AVI KR EL+E+EV AL++EV Sbjct: 93 EPPPEKTSLPFWLDPGTKGGAVVLTIVLFVAPIFLYNVILAVTDLDALEVGIDIGVGFTVLLLLGWMSTYIFRVATKDMTYAQQLKDYENAVIAKRLEELDEDEVQALVEEV 204
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Match: A0A1E7FE16_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE16_9STRA) HSP 1 Score: 109 bits (272), Expect = 5.220e-25 Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 2 Query: 131 KSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTMIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDA 433 KSNLPF+LDP TRGGAVV+ + ++P Y T+V G++G AG W+GVG+T + WV +Y FRVATK+MTYA QLK+YE AVI KR EL+++E A Sbjct: 12 KSNLPFWLDPGTRGGAVVLGIILFIVPFIGYAIATSVFGIEGVDAGKWIGVGFTAAATLVWVFTYIFRVATKDMTYAKQLKDYENAVIAKRLEELDDDEXQA 113
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Match: A0A7S2KVF4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KVF4_9STRA) HSP 1 Score: 110 bits (276), Expect = 8.520e-25 Identity = 57/111 (51.35%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 128 EKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTMIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 457 EKSNLP FLDP T+GGA+V+ + ++P+ Y T V GVD +AG +GVG+++I ++ W +Y FRVATK+MTYA QLK+YE AVI KR EL+E+EV AL++++ + Sbjct: 75 EKSNLPVFLDPGTKGGAIVLSLILFVIPIVIYQVATGVFGVDEIEAGRDIGVGFSVITMLLWGSTYIFRVATKDMTYAKQLKDYEDAVIAKRLEELDEDEVQALVEDIERE 185
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Match: B7FZY4_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZY4_PHATC) HSP 1 Score: 110 bits (275), Expect = 9.770e-25 Identity = 55/108 (50.93%), Postives = 75/108 (69.44%), Query Frame = 2 Query: 128 EKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTMIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 448 EK+ LPF+LDP T+GGAV + L P+ Y +T G D + G W+G+G+T++ + WV +Y FRVATK+MTYA QLK+YE AVI KR EL+E+E+ AL +EV Sbjct: 68 EKTKLPFWLDPGTKGGAVFLSLALFLFPILVYSIMTTFFGFDEIETGKWIGIGFTVLATLGWVSTYLFRVATKDMTYAKQLKDYENAVIAKRLEELDEDEIQALQEEV 175
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Match: A0A7S4JE55_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JE55_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.450e-24 Identity = 54/108 (50.00%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 128 EKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALT-AVGVDGGKAGAWVGVGYTMIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 448 E+ LP LDP T+GGA+ + + +LP+ Y +T G D +AG W+GVG+T++ L+ WV +Y FRVATK+MTYA QLK+YE AVI KR EL+E+EV AL++++ Sbjct: 67 EEKKLPMLLDPGTKGGALFLSLVLFILPIIGYEIVTLGFGFDEIEAGRWIGVGFTLVTLVLWVSTYIFRVATKDMTYAKQLKDYENAVIAKRLEELDEDEVQALVEDI 174
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Match: A0A7S3B0A8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B0A8_9EUKA) HSP 1 Score: 108 bits (269), Expect = 5.750e-24 Identity = 61/108 (56.48%), Postives = 75/108 (69.44%), Query Frame = 2 Query: 128 EKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTA-VGVDGGKAGAWVGVGYTMIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 448 EKS+LPF LD T+GG V L ++LP AY +T + +D AG V VGY +G +AW GSY FRVA K+MTYA QLK+YE AVI+KRF EL EEEVDAL+ E+ Sbjct: 55 EKSSLPFILDIGTKGGIVFYSILGIVLPFVAYNIMTGPMELDIVLAGNVVLVGYVGLGTVAWTGSYVFRVANKDMTYAQQLKDYENAVIQKRFEELSEEEVDALMGEI 162 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1478.3465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1478.3465.1 >prot_L-elsbetiae_contig1478.3465.1 ID=prot_L-elsbetiae_contig1478.3465.1|Name=mRNA_L-elsbetiae_contig1478.3465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp MPEPPVEPVPEKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVback to top mRNA from alignment at L-elsbetiae_contig1478:4856..13378- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1478.3465.1 ID=mRNA_L-elsbetiae_contig1478.3465.1|Name=mRNA_L-elsbetiae_contig1478.3465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8523bp|location=Sequence derived from alignment at L-elsbetiae_contig1478:4856..13378- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1478:4856..13378- >mRNA_L-elsbetiae_contig1478.3465.1 ID=mRNA_L-elsbetiae_contig1478.3465.1|Name=mRNA_L-elsbetiae_contig1478.3465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=726bp|location=Sequence derived from alignment at L-elsbetiae_contig1478:4856..13378- (Laminarionema elsbetiae ELsaHSoW15)back to top |