mRNA_L-elsbetiae_contig14776.3463.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Match: A0A6H5L6V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6V2_9PHAE) HSP 1 Score: 159 bits (402), Expect = 6.640e-48 Identity = 82/102 (80.39%), Postives = 91/102 (89.22%), Query Frame = 3 Query: 3 SLTKCFPEYDGPEGEAMPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIRRGLEPKA--RSSLTKMASPRAALDRLQKKIGSPLHSR 302 SL KCFPEYDGP+GEAMPALRFIEQKYKQAMLSKVPGK VTVH+IAARVRMDMKIAFGEVKDEIRR + K+ R S +K+ SPRAA++RLQ KIGSPL+SR Sbjct: 40 SLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHVIAARVRMDMKIAFGEVKDEIRRSFDSKSARRKSFSKLGSPRAAIERLQ-KIGSPLNSR 140
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Match: D8LTN0_ECTSI (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN0_ECTSI) HSP 1 Score: 158 bits (399), Expect = 1.360e-44 Identity = 82/103 (79.61%), Postives = 91/103 (88.35%), Query Frame = 3 Query: 3 SLTKCFPEYDGPEGEAMPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIRRGLEPKA---RSSLTKMASPRAALDRLQKKIGSPLHSR 302 SL KCFPEYDGP+GEAMPALRFIEQKYKQAMLSKVPGK VTVHIIAARVRMDMKIAFGEVKDEIRR + K+ + S +K+ SPRAA++RLQ KIGSPL+SR Sbjct: 282 SLKKCFPEYDGPDGEAMPALRFIEQKYKQAMLSKVPGKDVTVHIIAARVRMDMKIAFGEVKDEIRRSFDSKSAGRKKSFSKLGSPRAAIERLQ-KIGSPLNSR 383
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Match: A0A835YXT9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT9_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.370e-22 Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 3 Query: 3 SLTKCFPEYDGPEGEAMPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIR 197 SL CFPEYDGPEGEA PAL FIE+KYK M PGK V +H++AARVRMDMKIAFGEVK++I+ Sbjct: 173 SLKVCFPEYDGPEGEARPALEFIEKKYKDIMDKYCPGKGVIIHVVAARVRMDMKIAFGEVKEQIK 237
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Match: A0A7S2Y0R1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0R1_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 9.630e-22 Identity = 45/66 (68.18%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 3 SLTKCFPEYDGPEGEAMPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIRR 200 SL CFPEYDG EGE PAL FI+ KYK M VPGK V + +IAARVRMDMK+AFGEVKDEI++ Sbjct: 107 SLKNCFPEYDGHEGEMNPALDFIQDKYKAVMEKHVPGKPVQIFVIAARVRMDMKMAFGEVKDEIKK 172
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Match: A0A6S9GGW2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GGW2_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 1.760e-21 Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 3 SLTKCFPEYDGPEGEAMPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIR 197 SL KCFPEYDGP+GE PAL FIE KYK M PGK V++ +IAARVRMDMK+AFGEVKD +R Sbjct: 281 SLKKCFPEYDGPDGEMQPALEFIEGKYKTVMEQHCPGKEVSLFVIAARVRMDMKMAFGEVKDMVR 345
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Match: A0A835Z6Q6_9STRA (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q6_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.420e-20 Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 3 SLTKCFPEYDGPEGEAMPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIR 197 SL CFP YDGP+GE PAL +IE+KY + M PGK V VH++AARVRMDMKIAFGEVK++I+ Sbjct: 279 SLKVCFPAYDGPDGEVRPALEYIEKKYTEVMDKYCPGKGVNVHVVAARVRMDMKIAFGEVKEQIK 343
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Match: A0A812S7L1_SYMMI (GpaH protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7L1_SYMMI) HSP 1 Score: 89.0 bits (219), Expect = 1.620e-18 Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 3 Query: 6 LTKCFPEYDGPEGEAMPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIRR 200 L+ CFPEYDGP G+ PA+ FIE+KY+ M PGK V +H+I ARVRMDMKIAFGEVK+ +++ Sbjct: 274 LSNCFPEYDGPPGKVRPAVEFIEKKYQDIMNRVCPGKKVFIHVIEARVRMDMKIAFGEVKETLKK 338
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Match: A0A835YY90_9STRA (GPA4, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY90_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.360e-15 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 3 SLTKCFPEYDGPEGEAMPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIR 197 SL CFPEY GP+G+ AL+F+E +K M PGKHV ++AARVRMDMKIA+ EVKD ++ Sbjct: 274 SLRACFPEYSGPDGDVHAALQFVEGAFKAVMNEACPGKHVHTQVVAARVRMDMKIAWSEVKDTLK 338
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Match: D8LBA2_ECTSI (GPA4, alpha subunit of a heterotrimeric G protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA2_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 4.200e-14 Identity = 30/65 (46.15%), Postives = 49/65 (75.38%), Query Frame = 3 Query: 6 LTKCFPEYDGPEGEAMPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIRR 200 L+ CFPE+ GPE + AL +++ +Y + + VPGK + H++AARVRMDMK+A+G+VK++++R Sbjct: 282 LSVCFPEFPGPENDVHAALEYVQAEYSKILEEAVPGKELHAHVVAARVRMDMKVAWGDVKEQLKR 346
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Match: A0A835ZGM8_9STRA (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGM8_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.240e-10 Identity = 35/96 (36.46%), Postives = 51/96 (53.12%), Query Frame = 3 Query: 3 SLTKCFPEYDGPEGEAMPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIRRGLEPKARSSLTKMASPRAALDRLQKKIGSP 290 SL CFPEY+G +G M A+ F+E K++ M PGK +T H +AARVRM+ + + ++ I+ K S SP+ L +GSP Sbjct: 281 SLKTCFPEYEGEDGNVMAAIEFVENKFRGVMAQATPGKPLTTHCMAARVRMECRQGWNDIMQGIKGEKGGKGTLSPFSKHSPQPGL------LGSP 370 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14776.3463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14776.3463.1 >prot_L-elsbetiae_contig14776.3463.1 ID=prot_L-elsbetiae_contig14776.3463.1|Name=mRNA_L-elsbetiae_contig14776.3463.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp MPALRFIEQKYKQAMLSKVPGKHVTVHIIAARVRMDMKIAFGEVKDEIRRback to top mRNA from alignment at L-elsbetiae_contig14776:1374..2579+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14776.3463.1 ID=mRNA_L-elsbetiae_contig14776.3463.1|Name=mRNA_L-elsbetiae_contig14776.3463.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1206bp|location=Sequence derived from alignment at L-elsbetiae_contig14776:1374..2579+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14776:1374..2579+ >mRNA_L-elsbetiae_contig14776.3463.1 ID=mRNA_L-elsbetiae_contig14776.3463.1|Name=mRNA_L-elsbetiae_contig14776.3463.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=510bp|location=Sequence derived from alignment at L-elsbetiae_contig14776:1374..2579+ (Laminarionema elsbetiae ELsaHSoW15)back to top |