prot_L-elsbetiae_contig1476.3456.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1476.3456.1
Unique Nameprot_L-elsbetiae_contig1476.3456.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1034
Homology
BLAST of mRNA_L-elsbetiae_contig1476.3456.1 vs. uniprot
Match: A0A6H5JV71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV71_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 1.010e-84
Identity = 380/1090 (34.86%), Postives = 486/1090 (44.59%), Query Frame = 0
Query:   30 RFHRDSSLDHATHLREVQRRRAGYLADLKKRDQHQQHGRRYCTNIDRADNASEQSDATLLDKIEASAGATSHRKLYNGSPPAAATGSQSSPRFGRPQLRPPYPTRPSTTPATAATGRATSPSRLGGRSRSKENRQAATERAVRVYSAGIAN---GGRRHRSPVAAL-PAWDDRSPSPSAAEQQRRRLSPREHGRHPLPRPLDDAGVEKAGKACPEVPCHGGVATGASKGSSDWRRRPVRPAAGLRPSKRFSRPVSAFAGRWDG-DESFPDKPLETLFSEECEVDQGKLERRDACPVEDKPSSAPKERAHLPPSDPSVGLCRARTAEETPVIQRARRLELQRLAIERKELQAQLAEVKQLMRASKVRGKAAPGGLLG--AVVGDSPRKPRGRTSARRGNAAGARCVL---------------KKARPRG------EGEEERTEGSR----GCPATSGVRVDGDYALPGGGAXXXXXXXXXXXXXXXXXXXGERRSK---------SRAQQPQVGDIRSATPENKTGKRGALEHSATMLVAFNTCVSVNRPASVDWVEGASPPRGGNIACAGGGDTGARGPRRPKSASRRSRSAPRPSTKITVA--DPIARGDRE----AVDELVQREKNDSTRRGRAIRPVSNRPRSRASKNRKNVGRFAARKERSRSQDDGERRVYFAQLPASENRSSSN---NTKSVPGDHTCTXXXXXXXXXXXXXXXXXXXXXXXXX------------------KRYEDDFEVVS--DSYESDNEPWGDSTS-------LHGPSEAKQLVSHESSRRSRARGSGIDKYGKRTRNDREKYSTGSCLGVGAGP----AADSFLRDC---EKWSDGHKQGLN-TPAIDGGAASWAEWNQPDGGSGGFPSSCGWDTRESEPAAAAAAAHASGRKVDREFDHLRVDGCVNVLGARAEEDTDMAVGARNAGEDQRRKLDESRLSSSYKEYSADTAGGPPSLARPPRLVDDDQVKRSVGAKVGEEGEEKASTRSMSDGGESLYDILVSSLDDSYSDETWSLESHDQRNDTATPAELGVTAARTAGLKTQRRYSAAAGSSSDGSSLYDVTSQSS 1034
            RFHRD SLD AT L+E Q RR GYLADLKKRDQ Q+ G R+  + +R  N +      + D+  ASA      K    +      GS SSPRF     R P P RPSTTPA + T RA SP+RL G S+ KENRQAA ERAVR+YSAG  +   GGR    PV    P WDDR+  P+ A+  RRRLSPRE+GR+PLP PLDD GV    +AC E              + +W                            DG DE    +P+ T                   P E K SSA + R   PP+       RA+T EE P +QRARRLEL RLAIE+KEL+AQLAEVKQL+RASKV    A    L   A+   SP    G   ARR                         KKARPR       EG E R E S     G  A+   R +G Y  P                         RRSK         +R +QPQV     + PE + G   A+  +A   VAFN+ VS+ R AS   VEG +P RG ++          R  +R KSASRR+RS+P    K ++A   P   G  E    A   L +R ++  +RR  + R      + RA    K+  + AAR+   R+Q + ERRVYF++ P   +RS+     +++ + G  + +                                           + YEDDFEV+S  DSYESD EPWG S S        HG +E  Q     +   SR+R S ++    R  + + +    SC     G        S L+D    E W DG     + + A   GAASW EWN+P+     F  S   D+   E AAA   +    R V   F+HL VDGC N+L   AE+    A   R AG    + +D    SSSY+E+   TAGGPPS+  P  +V+D+  K  V     E G        M+ G   + D   S               +D+RN                    +RRYSAA G SSDGSSLYDVTS++S
Sbjct:    4 RFHRDGSLDRATQLKEAQDRRIGYLADLKKRDQQQERGSRHHVHGERLKN-NWLDRGKIHDQGVASAAGNMVGKAETAAGSPFPHGSYSSPRFHHASRRSPIPNRPSTTPAVSPT-RAVSPARLRGISQ-KENRQAANERAVRIYSAGARSCPSGGRNPHPPVGCRSPPWDDRT-LPTTADPHRRRLSPRENGRYPLPWPLDDIGVGGRRQACDE--------------NQEWL---------------------------DGADERVLGEPIAT-------------------PREHKTSSANQGRGCSPPA-------RAQTPEEMPAMQRARRLELHRLAIEKKELEAQLAEVKQLLRASKVPSTKAKSFWLPREAIRATSPTN--GERPARRRXXXXXXXXXXRSPTTENDFVVHDGKKARPRRSRGKSEEGNERRVEHSASPDCGRSASGSARGEG-YRSP------------------------RRRSKDGGQPGRCDTRERQPQVIGGTRSNPERQAGSGKAVASTAIPSVAFNSSVSIGRAASAGRVEGRTPQRGRHLDARQEDHVPGRRLQRRKSASRRTRSSPCSPMKGSIAYGSPPDNGGSEDGLFAQRRLGRRREDSGSRRPASARRDR---KFRAGDPIKHEQQLAARRRGDRNQHNEERRVYFSKFPVRGSRSAIRKGASSRRIDGGGSTSLSFNATSKRTQSMQPIADRGAKAVSLYDENRVEDATGAEDTHQQGYEDDFEVLSVRDSYESDFEPWGKSESDEEQLIARHGSTEFPQSTKRVALD-SRSRYSMVEPSAGRDDDAQLRGRETSCDEWWGGNDFNLTTGSLLQDXXXDESWCDGRPGATSISHANSPGAASWREWNRPNEEHSRFALSHACDSNTPEAAAAHEGSLTGHRGVAAGFNHLWVDGCDNILVDSAEKKATDADVPRAAGRSDPQNVDRELYSSSYEEHPVGTAGGPPSVPLPRMVVEDENGKPDVSGFGAEAG--------MTTGAAYVSDPKASL--------------NDRRN--------------------RRRYSAAEGESSDGSSLYDVTSETS 949          
BLAST of mRNA_L-elsbetiae_contig1476.3456.1 vs. uniprot
Match: D7FRP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP2_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 1.350e-70
Identity = 250/616 (40.58%), Postives = 307/616 (49.84%), Query Frame = 0
Query:    1 MICGNAALLYESPD-ESNGRKLKFSRSITDRFHRDSSLDHATHLREVQRRRAGYLADLKKRDQHQQHGRRYCTNIDRADNASEQSDATLLDKIE--------ASAGATSHRKLYNGSPPAAATGSQSSPRFGRPQLRPPYPTRPSTTPATAATGRATSPSRLGGRSRSKENRQAATERAVRVYSAGIA---NGGRRHRSPVAAL-PAWDDRSPSPSAAEQQRRRLSPREHGRHPLPRPLDDAGVEKAGKACPEVPCHGGVATGASKGSSDWRRRPVRPAAGLRPSKRFSRPVSAFAGRWDG-DESFPDKPLETLFSEECEVDQGKLERRDACPVEDKPSSAPKERAHLPPSDPSVGLCRARTAEETPVIQRARRLELQRLAIERKELQAQLAEVKQLMRASKVRG-KAAPGGL-LGAVVGDSPRKPRGRTSARRGNAAGARCVLKKARPRGEGEEERTEGSRGCPA-TSGVRVDGDYALPGGGAXXXXXXXXXXXXXXXXXXXGERRSK---------SRAQQPQVGDIRSATPENKTGKRGALEHSATMLVAFNTCVSVNRPASVDWVEGASPPRGGNIACAGGGDTGARGPRRPKSASRRSRSAPRPSTKITVA 590
            MICGNAALL ESPD +S GRK KFSRS+  RFHRD SLD AT L+E Q RR GYLA LKKRDQ Q+ G R+  N +R +N         LD+ E        A+       ++  GSP     GS SSPRF     R P P RPSTTPA + TG A SP+R+ G  + +ENRQAA ERAVRVYSAG     NGGR    PV    P WDDR+  P+ A+ QRRRLSPRE+GRHPLP PLDD GV    +AC                + +W                            DG DE    +P+                   A P E K SSA + RA  PP+       RA T EETP +QRARRLELQRLAIE++EL+AQLAEVKQL+RASKV   KA   GL   A+   SP K  G   ARR              P  E +    +G +  P  +SG    G+       A                     RR K         +R +QPQV     ++P+ + G   A+E +A   VAFN+ VS+   AS   VEG SP R  ++          R  +RPKSA+RR+R++P P  K ++A
Sbjct:    1 MICGNAALLSESPDHKSKGRKFKFSRSMMGRFHRDGSLDRATRLKEAQDRRIGYLAALKKRDQQQERGSRHHVNSERLEN-------NWLDRGEIHDQGVASAAGNMVGIAEMAAGSP--FPRGSHSSPRFQHTSKRLPIPNRPSTTPAVSPTG-AVSPARIRGLPQ-RENRQAANERAVRVYSAGARAGPNGGRNPHPPVVCRSPPWDDRT-LPTTADPQRRRLSPRENGRHPLPWPLDDIGVGGRRQAC--------------DANQEWL---------------------------DGADEPVVGEPI-------------------AAPREHKTSSANEGRACSPPA-------RAHTPEETPAMQRARRLELQRLAIEKRELEAQLAEVKQLLRASKVPSTKAKSVGLPCEAIRETSPTKSHGERPARRXXXXXXXXXXXXXSPTTENDFVVHDGMKTRPRRSSGKSEKGNERRVECPASPDRGRSASDSARDEGYSSPRRRRKDGGQPGRCDTRERQPQVIGSTRSSPKRRAGSEKAVESTAIPPVAFNSSVSIGMAASAGRVEGRSPQRRRHLDARREDYVPGRRLQRPKSAARRTRASPCPPMKSSIA 537          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1476.3456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV71_9PHAE1.010e-8434.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRP2_ECTSI1.350e-7040.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 363..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1476contigL-elsbetiae_contig1476:1236..5797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1476.3456.1mRNA_L-elsbetiae_contig1476.3456.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1476 1236..5797 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1476.3456.1 ID=prot_L-elsbetiae_contig1476.3456.1|Name=mRNA_L-elsbetiae_contig1476.3456.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1034bp
MICGNAALLYESPDESNGRKLKFSRSITDRFHRDSSLDHATHLREVQRRR
AGYLADLKKRDQHQQHGRRYCTNIDRADNASEQSDATLLDKIEASAGATS
HRKLYNGSPPAAATGSQSSPRFGRPQLRPPYPTRPSTTPATAATGRATSP
SRLGGRSRSKENRQAATERAVRVYSAGIANGGRRHRSPVAALPAWDDRSP
SPSAAEQQRRRLSPREHGRHPLPRPLDDAGVEKAGKACPEVPCHGGVATG
ASKGSSDWRRRPVRPAAGLRPSKRFSRPVSAFAGRWDGDESFPDKPLETL
FSEECEVDQGKLERRDACPVEDKPSSAPKERAHLPPSDPSVGLCRARTAE
ETPVIQRARRLELQRLAIERKELQAQLAEVKQLMRASKVRGKAAPGGLLG
AVVGDSPRKPRGRTSARRGNAAGARCVLKKARPRGEGEEERTEGSRGCPA
TSGVRVDGDYALPGGGAGEGDDDPPRGRRWRKRKRNGERRSKSRAQQPQV
GDIRSATPENKTGKRGALEHSATMLVAFNTCVSVNRPASVDWVEGASPPR
GGNIACAGGGDTGARGPRRPKSASRRSRSAPRPSTKITVADPIARGDREA
VDELVQREKNDSTRRGRAIRPVSNRPRSRASKNRKNVGRFAARKERSRSQ
DDGERRVYFAQLPASENRSSSNNTKSVPGDHTCTNTTVSKPIEHARTRTE
ASTSAEDAEKRYEDDFEVVSDSYESDNEPWGDSTSLHGPSEAKQLVSHES
SRRSRARGSGIDKYGKRTRNDREKYSTGSCLGVGAGPAADSFLRDCEKWS
DGHKQGLNTPAIDGGAASWAEWNQPDGGSGGFPSSCGWDTRESEPAAAAA
AAHASGRKVDREFDHLRVDGCVNVLGARAEEDTDMAVGARNAGEDQRRKL
DESRLSSSYKEYSADTAGGPPSLARPPRLVDDDQVKRSVGAKVGEEGEEK
ASTRSMSDGGESLYDILVSSLDDSYSDETWSLESHDQRNDTATPAELGVT
AARTAGLKTQRRYSAAAGSSSDGSSLYDVTSQSS
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