prot_L-elsbetiae_contig14753.3454.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14753.3454.1
Unique Nameprot_L-elsbetiae_contig14753.3454.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length98
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14753.3454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 31..54
e-value: 0.086
score: 22.0
coord: 8..30
e-value: 45.0
score: 7.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..81
e-value: 1.6E-18
score: 68.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 33..74
e-value: 4.1E-7
score: 29.7
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 9..30
score: 5.895
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 57..79
score: 6.38
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 33..54
score: 7.235
NoneNo IPR availablePANTHERPTHR24366FAMILY NOT NAMEDcoord: 3..74
NoneNo IPR availablePANTHERPTHR24366:SF102LEUCINE RICH REPEAT CONTAINING 15coord: 3..74
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14753contigL-elsbetiae_contig14753:792..3962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14753.3454.1mRNA_L-elsbetiae_contig14753.3454.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14753 792..3962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14753.3454.1 ID=prot_L-elsbetiae_contig14753.3454.1|Name=mRNA_L-elsbetiae_contig14753.3454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=98bp
EEIFSKPVNIHTLDLASNWLNELPAGLFDTLTKLEKLNLMKNDLEKLPDG
IFQTLTSLKNLWLTNNRELECIPPVPSTATRVSADRGVDTCGEWFKP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt