mRNA_L-elsbetiae_contig103.345.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Match: D8LBJ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ3_ECTSI) HSP 1 Score: 574 bits (1480), Expect = 2.260e-199 Identity = 411/545 (75.41%), Postives = 428/545 (78.53%), Query Frame = 1 Query: 7 AHQTKLEREIGGIADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEPLRHHLAQVREEDANGLSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVRTGRGGASDNSVLAQLAELFSSISKQKRRSGHLAPTDFLRTLRERNELFRGNMQQDAHEFFNFVLNEMADSLVARKXXXXXXXXXXXXXXXXXXXXXXXXXXTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRRPSPWSKIPTLKGGFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGRNSDGSNGPSGETWIHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRKFSSTETLTKKNKFFCESCNALQEAEKKIRLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDEAGEADADGRLYRRSRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQQVLKQCFGLARPTTAATNTGYLLLYDCGE 1641 +HQTKLERE G I DGDGQERFFGLENFGNTCYCNSVLQA LYFCEPLRHHLAQVREED +G XXXXXX S +VL++LAELFSSIS QKRRSGHLAPT+FLRTLRERNELFRGN QQDAHEFFNFVLNEMADS+VAR+ XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX RR S WSK+ + KG FG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+ R SDG+N GETW+HRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLR FSSTETLTKKNKFFCE+C ALQEAEKKIRLKRLPRVLTLHLKRFKYVESLE+FSKLSHRVVFPLELRTPNMTD AGEADADGRLYR LFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQ VLKQCFGLARP +AATNTGYLLLYDCGE Sbjct: 6 SHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQA---LYFCEPLRHHLAQVREEDTSG--------------------------GXXXXXXXXXXXXXXXXSGKTVLSELAELFSSISNQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVVARRKLREEAATVQEHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--------------RRSSTWSKMSSFKGSFGNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGESAAGVDGGGGN---ARGNRRTSDGANESGGETWVHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRNFSSTETLTKKNKFFCETCYALQEAEKKIRLKRLPRVLTLHLKRFKYVESLENFSKLSHRVVFPLELRTPNMTDAAGEADADGRLYR---LFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQ-VLKQCFGLARPASAATNTGYLLLYDCGE 500
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Match: A0A835Z200_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z200_9STRA) HSP 1 Score: 363 bits (931), Expect = 2.390e-118 Identity = 224/542 (41.33%), Postives = 277/542 (51.11%), Query Frame = 1 Query: 16 TKLEREIGGIADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEPLRHHLAQVREEDANGLSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVRTGRGGASDNSVLAQLAELFSSISKQKRRSGHLAPTDFLRTLRERNELFRGNMQQDAHEFFNFVLNEMADSLVARKXXXXXXXXXXXXXXXXXXXXXXXXXXTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRRPSPWSKIPTLKGGFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGRNSDGSNGPSGETWIHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRKFSSTETLTKKNKFFCESCNALQEAEKKIRLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDEAGEADADGRLYRRSRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQQVLKQCFGLARPTTAATNTGYLLLYDCGE 1641 +KLE+++G + ER++GLENFGNTCYCNSV+QA LYFC PLR L ++++ + + TG S+L QLAELF+ I+ KR SG +AP F++TLRE NELFRGNMQQDAHEF+NF++N+MAD+L+ + G TWIH +FQGVLTN+TKC+CCETV++RDEPF+DL LD+EQN SV+ACLR FS ETLT NKFFCE+C ALQEAEK++ L+RLPRVLTLHLKRFKY+E +++FSKLSHRVVFPLELR PNM ++ ADADG LY LFAVVVHIGRG NHGHYVAVVKS GRW+LFDD++VE+V+E VL + FGL+ +TNTGYLL YDCGE Sbjct: 9 SKLEQDLGYTEPVEAGERYYGLENFGNTCYCNSVMQA---LYFCGPLRTELLARHTQNSSA---------------------------------TVMATGSSQYPAGSLLYQLAELFAVITNTKRLSGRVAPQAFMQTLRETNELFRGNMQQDAHEFYNFIINDMADTLLRMSA-----------------------------------------------------------------------------------------------------------------------------------------------------DKSGDQAAPKTTWIHDLFQGVLTNETKCICCETVTHRDEPFVDLPLDIEQNCSVTACLRNFSRMETLTGCNKFFCETCCALQEAEKRMCLRRLPRVLTLHLKRFKYMEQIQNFSKLSHRVVFPLELRMPNMARDSA-ADADGILYH---LFAVVVHIGRGLNHGHYVAVVKSQGRWMLFDDDLVEVVDEA-VLHKVFGLSNHLGGSTNTGYLLFYDCGE 360
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Match: A0A388KQF3_CHABU (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KQF3_CHABU) HSP 1 Score: 302 bits (774), Expect = 4.570e-92 Identity = 215/545 (39.45%), Postives = 280/545 (51.38%), Query Frame = 1 Query: 1 MGAHQTKLEREIGGIADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEPLRHHLAQVREEDANGLSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVRTGRGGASDNSVLAQLAELFSSISKQKRRSGHLAPTDFLRTLRERNELFRGNMQQDAHEFFNFVLNEMADSLVARKXXXXXXXXXXXXXXXXXXXXXXXXXXTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRRPSPWSKIPTLKGGFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGRNSDGSNGPSGETWIHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRKFSSTETLTKKNKFFCESCNALQEAEKKIRLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDEAGEADADGRLYRRSRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQQVLKQCFGLARPTTAATNTGYLLLYDC 1635 MG ++LE+ +G + ER+FGLENFGNTCYCNSVLQA LYFC P R HL + + G A D ++L LA+LF I+ QKR++G +AP F++ +++ NELFR M QDAHEF NF+LNE+AD ++AR+ TN P S + GG XXXXXXXXXXXXXX XX R + S GP TW+H IFQG LTN+TKCLCCETV+ RDE F+DLSLD+EQNSS+++CLR FSSTETL ++KFFC+ C +LQEA+K++++K PR+L LHLKRFKY+E L + KLS+RVVFPLEL+ N TD+A ++A+ LFAVVVH+G GPNHGHYV++VKS WL FDD+ VE ++E V + FG + + T+ GY+L Y+C Sbjct: 123 MGTSSSRLEKALGEFPE---CERYFGLENFGNTCYCNSVLQA---LYFCVPFREHLLEYFGK-CKGFPEA----------------------------------------DENLLTCLADLFGQINSQKRKTGVIAPKRFVQRVKKENELFRSYMHQDAHEFLNFLLNELAD-ILAREAKGISSLSGNG---------------TNSANGGFT----------------------------PGTSSSASSRTGGANQPSVNNGRIPGSGGSXXXXXXXXXXXXXXGIGGKGLHISTSQSQLQFQSNVSGAGAASSAANGLXXXXXXXRPNGMSGGPV-VTWVHEIFQGTLTNETKCLCCETVTARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDRCCSLQEAQKRMKIKVPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEAE------YSLFAVVVHVGSGPNHGHYVSLVKSHNHWLYFDDDNVEPIDESTV-QTFFGSTQEMSNNTDHGYILFYEC 568
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Match: A0A1Y1HV22_KLENI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HV22_KLENI) HSP 1 Score: 292 bits (748), Expect = 1.820e-90 Identity = 202/545 (37.06%), Postives = 272/545 (49.91%), Query Frame = 1 Query: 1 MGAHQTKLEREIG-GIADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEPLRHHLAQVREEDANGLSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVRTGRGGASDNSVLAQLAELFSSISKQKRRSGHLAPTDFLRTLRERNELFRGNMQQDAHEFFNFVLNEMADSLVARKXXXXXXXXXXXXXXXXXXXXXXXXXXTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRRPSPWSKIPTLKGGFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGRNSDGSNGPSGETWIHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRKFSSTETLTKKNKFFCESCNALQEAEKKIRLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDEAGEADADGRLYRRSRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQQVLKQCFGLARPTTAATNTGYLLLYD 1632 MG +KLE+ +G +G E +FGLENFGNTCYCNSVLQA LYFC P R L + + + D ++L+ LA+LFS IS QK+++G +AP F++ L+++NELFR M QDAHEF NF+LNE+A++L + ++ P+P + GG G XXXXXXXXXXXXXX G+ G +TW+H IFQG++TN+T+CLCCET+++RDE F DLSLD+EQNSS+++CLR FSSTETL +NKFFC+ C +LQEA+K++++K P++L LHLKRFKY+E L KL +RVVFPLELR N + A+A+ LF VVVH+G GPNHGHYV++VKS WL FDDE VE ++E V + FG + + T+ GY+L Y+ Sbjct: 1 MGGSGSKLEKALGEAFPEG---EHYFGLENFGNTCYCNSVLQA---LYFCAPFREKLLKYAAKIPKPVP----------------------------------------EPDETLLSSLADLFSQISTQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELAENLEKEEKAPR-------------------------------------------------------ESEAPTP-----STSGGHGEGEEFGKANXXXXXXXXXXXXXX--------------------------------------------------KSGAQGRQAKTWVHEIFQGLVTNETRCLCCETLTSRDETFFDLSLDIEQNSSITSCLRNFSSTETLNAENKFFCDKCCSLQEAQKRMKIKAAPQILALHLKRFKYIEQLGRHKKLMYRVVFPLELRLCNTVEGGDGAEAE------YSLFGVVVHVGSGPNHGHYVSLVKSHSHWLFFDDESVEPIDESMV-QSFFGSTQEYSNNTDHGYILFYE 382
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Match: A0A059AL74_EUCGR (USP domain-containing protein n=37 Tax=malvids TaxID=91836 RepID=A0A059AL74_EUCGR) HSP 1 Score: 291 bits (745), Expect = 1.950e-90 Identity = 197/547 (36.01%), Postives = 265/547 (48.45%), Query Frame = 1 Query: 1 MGAHQTKLEREIG-GIADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEPLRHHLAQVREEDANGLSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVRTGRGGASDNSVLAQLAELFSSISKQKRRSGHLAPTDFLRTLRERNELFRGNMQQDAHEFFNFVLNEMADSLVARKXXXXXXXXXXXXXXXXXXXXXXXXXXTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRRPSPWSKIPTLKGGFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGRNSDGSNGPSGE--TWIHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRKFSSTETLTKKNKFFCESCNALQEAEKKIRLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDEAGEADADGRLYRRSRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQQVLKQCFGLARPTTAATNTGYLLLYD 1632 MGA +KLE+ +G +G ER+FGLENFGNTCYCNSVLQA LYFC P R Q+ + AN S G DN +LA LA+LF+ IS QK+++G +AP F++ L+++NELFR M QDAHEF NF+LNE+ D+L D SP K TA +N+ + GP + TW+H+ FQG+LTN+T+CL CETV+ RDE F DLSLD+EQNSS+++CL+ FSSTETL ++KFFC+ C +LQEA+K++++K+ P++L +HLKRFKY+E L + KLS+RVVFPLEL+ N + DAD LFAVVVH+G GPNHGHYV++VKS WL FDDE VE+++E V + FG A+ ++ T+ GY+L Y+ Sbjct: 1 MGAAGSKLEKALGDSFPEG---ERYFGLENFGNTCYCNSVLQA---LYFCVPFRD---QLLDYYANNKSL--------------------------------------GDEDN-LLACLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEIVDTLEKEAQAAKN------------------------------------------------------DQETSSPAEK---------------------------------------------------------------------------TANGPKNAHANGGPKEQLDTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPQILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVE-----DADSEY----SLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAV-QTFFGSAQEYSSNTDHGYILFYE 360
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Match: A9RF40_PHYPA (Predicted protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A9RF40_PHYPA) HSP 1 Score: 291 bits (744), Expect = 3.030e-90 Identity = 191/548 (34.85%), Postives = 264/548 (48.18%), Query Frame = 1 Query: 1 MGAHQTKLEREIGG-IADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEPLRHHLAQVREEDANGLSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVRTGRGGASDNSVLAQLAELFSSISKQKRRSGHLAPTDFLRTLRERNELFRGNMQQDAHEFFNFVLNEMADSLVARKXXXXXXXXXXXXXXXXXXXXXXXXXXTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRRPSPWSKIPTLKGGFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGRNSDGSNGPSGE---TWIHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRKFSSTETLTKKNKFFCESCNALQEAEKKIRLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDEAGEADADGRLYRRSRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQQVLKQCFGLARPTTAATNTGYLLLYD 1632 MGA +KLE+ +G +G ER+FGLENFGNTCYCNSVLQA LYFC P R L + + S+ ++L L+ELF+ I+ QK+++G +AP F++ +R++NELFR M QDAHEF NF+LNE+ D LV ++ G +S G+G + +NG E TW+H+IFQG LTN+T+CL CET++ RDE F+DLSLD+EQNSS+++CLR FSSTETL ++KFFC+ C +LQEA+K++++K PR+L LHLKRFKY+E L + KLS+RVVFPLEL+ N TD+A ++A+ LFAVVVH+G GPNHGHYV++VKS WL FDDE VE+++E +++ FG + + T+ GY+L Y+ Sbjct: 1 MGASSSKLEKVLGDQFPEG---ERYFGLENFGNTCYCNSVLQA---LYFCVPFREQLLEYCGQKKPVAE-----------------------------------------SEENLLTCLSELFTQINSQKKKTGVIAPKRFVQRVRKQNELFRSYMHQDAHEFLNFLLNELVDILVKE--------------------------------------------------------------------AQAANSNSGSHTSPEK-------------------------------------------------------------VVGNGATNGLANGNHKEPVVTWVHKIFQGTLTNETRCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEAE------YSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEIIDES-IVQTFFGSTQEYSNNTDHGYILFYE 365
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Match: U5CXE6_AMBTC (USP domain-containing protein n=10 Tax=Magnoliopsida TaxID=3398 RepID=U5CXE6_AMBTC) HSP 1 Score: 290 bits (743), Expect = 3.430e-90 Identity = 195/548 (35.58%), Postives = 262/548 (47.81%), Query Frame = 1 Query: 1 MGAHQTKLEREIGG-IADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEPLRHHLAQVREEDANGLSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVRTGRGGASDNSVLAQLAELFSSISKQKRRSGHLAPTDFLRTLRERNELFRGNMQQDAHEFFNFVLNEMADSLVARKXXXXXXXXXXXXXXXXXXXXXXXXXXTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRRPSPWSKIPTLKGGFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGRNSDGSNGPSGE---TWIHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRKFSSTETLTKKNKFFCESCNALQEAEKKIRLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDEAGEADADGRLYRRSRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQQVLKQCFGLARPTTAATNTGYLLLYD 1632 MGA +KLE+ +G +G ER+FGLENFGNTCYCNSVLQA LYFC P R L + + +G A DN +L LAELFS I QK+++G +AP F++ ++++NELFR M QDAHEF NF+LNE+ D L + + SP + P+ K +G S NG E TW+H+ FQG+LTN+T+CL CETV+ RDE F+DLSLD+EQNSS+++CLR FSSTETL ++KFFC+ C +LQEA+K++++K+ P +L +HLKRFKY+E L + KLS+RVVFPLEL+ N + DAD LFAVVVH+G GPNHGHYV++VKS WL FDDE VE+++E V + FG A+ ++ T+ GY+L Y+ Sbjct: 1 MGAAGSKLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQA---LYFCVPFREQLLEYYGNNKT----------------------------------------QGDADDN-LLTCLAELFSQICSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKES-----------------------------------------------------------NAAKASPETSSPSEK-----------------------------------------------------------------------TANGPRSLQPNGVQKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVE-----DADSEY----SLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAV-QTFFGSAQEYSSNTDHGYILFYE 361
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Match: D8S7A6_SELML (USP domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S7A6_SELML) HSP 1 Score: 290 bits (742), Expect = 5.660e-90 Identity = 190/551 (34.48%), Postives = 265/551 (48.09%), Query Frame = 1 Query: 1 MGAHQTKLEREIGG-IADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEPLRHHLAQVREEDANGLSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVRTGRGGASDNSVLAQLAELFSSISKQKRRSGHLAPTDFLRTLRERNELFRGNMQQDAHEFFNFVLNEMADSLVARKXXXXXXXXXXXXXXXXXXXXXXXXXXTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRRPSPWSKIPTLKGGFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGRNSDGSNGPSGE-----TWIHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRKFSSTETLTKKNKFFCESCNALQEAEKKIRLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDEAGEADADGRLYRRSRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQQVLKQCFGLARPTTAATNTGYLLLYDC 1635 MGA +KLE+ +G +G ER+FGLENFGNTCYCNSVLQA LYFC P R L + RT G + ++L LA+LFS I+ QK+++G +AP F++ ++++NELFR M QDAHEF NF+LNE+ ++L + R + + P K + + +NG + + TW+H+IFQG LTN+T+CL CET++ RDE F+DLSLD+EQNSS+++CLR FSSTETL ++KFFC+ C +LQEA+K++++K PR+L LHLKRFKY+E L + KLS+RVVFPLEL+ N TD+A ++++ LFAVVVH+G GPNHGHYV++VKS WL FDDE VE+++E V + FG + + T+ GY+L Y+C Sbjct: 1 MGATGSKLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQA---LYFCVPFRDQLLEYYS-----------------------------------------RTKSSGEPEENLLTCLADLFSQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVETLEKEAK-----------------------------------------------------------SGRTASGNLKPAEK---------------------------------------------------------------------------KENGVANGTAADQDHPLTWVHKIFQGFLTNETRCLRCETITARDEKFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKTPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSESE------YSLFAVVVHVGSGPNHGHYVSLVKSHSHWLFFDDENVEIIDETYV-QTFFGSTQEYSNNTDHGYILFYEC 363
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Match: A0A176W0E8_MARPO (USP domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W0E8_MARPO) HSP 1 Score: 290 bits (742), Expect = 6.210e-90 Identity = 192/549 (34.97%), Postives = 269/549 (49.00%), Query Frame = 1 Query: 1 MGAHQTKLEREIGG-IADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEPLRHHLAQVREEDANGLSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVRTGRGGASDNSVLAQLAELFSSISKQKRRSGHLAPTDFLRTLRERNELFRGNMQQDAHEFFNFVLNEMADSLVARKXXXXXXXXXXXXXXXXXXXXXXXXXXTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRRPSPWSKIPT-LKGGFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGRNSDGSNGPSGETWIHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRKFSSTETLTKKNKFFCESCNALQEAEKKIRLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDEAGEADADGRLYRRSRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQQVLKQCFGLARPTTAATNTGYLLLYDCGE 1641 MG+ +KLE+ +G +G ER+FGLENFGNTCYCNSVLQA LYFC P R L E A+ G+ G +D+++L L+ELF+ I+ QK+++G +AP F++ ++++NELFR M QDAHEF NF+LNE+ D L + +P+ P L G + ++G++ TW+H+IFQG LTN+T+CL CET++ RDE F+DLSLD+EQNSS+++CLR FSSTETL ++KFFC+ C +LQEA+K++++K PR+L LHLKRFKY+E L + KLS+RVVFPLEL+ N TD+A ++A+ LFAVVVH+G GPNHGHYV++VKS WL FDDE VE+++E V++ FG + + T+ GY+L Y+ E Sbjct: 3 MGSSGSKLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQA---LYFCVPFRDQLL----EHASRSKGS-------------------------------------GETDDNLLTCLSELFTQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAKA----------------------------------------------------------SSKPTSGQVHPDKLANGTANGI----------------------------------------------------------------------ANGNHPHPVVTWVHKIFQGTLTNETRCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEAE------YSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEIIDES-VVQTFFGSTQEYSNNTDHGYILFYESLE 369
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Match: B9SZ50_RICCO (Ubiquitin carboxyl-terminal hydrolase, putative n=4 Tax=rosids TaxID=71275 RepID=B9SZ50_RICCO) HSP 1 Score: 289 bits (740), Expect = 1.120e-89 Identity = 195/548 (35.58%), Postives = 264/548 (48.18%), Query Frame = 1 Query: 1 MGAHQTKLEREIGG-IADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEPLRHHLAQVREEDANGLSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVRTGRGGASDNSVLAQLAELFSSISKQKRRSGHLAPTDFLRTLRERNELFRGNMQQDAHEFFNFVLNEMADSLVARKXXXXXXXXXXXXXXXXXXXXXXXXXXTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRRPSPWSKIPTLKGGFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGRNSDGSNGPSGE---TWIHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRKFSSTETLTKKNKFFCESCNALQEAEKKIRLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDEAGEADADGRLYRRSRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQQVLKQCFGLARPTTAATNTGYLLLYD 1632 MGA +KLE+ +G +G ER+FGLENFGNTCYCNSVLQA LYFC P R Q+ E AN SG G ++ ++L LA+LF+ IS QK+++G +AP F++ L+++NELFR M QDAHEF NF+LNE+ D L D S KIP +G + +NG S E TW+H+ FQG+LTN+T+CL CETV+ RDE F DLSLD+EQNSS+++CL+ FSSTETL ++KFFC+ C +LQEA+K++++K+ P +L +HLKRFKY+E L + KLS+RVVFPLEL+ N + D+D LFAVVVH+G GPNHGHYV++VKS WL FDDE VE+++E V + FG ++ ++ T+ GY+L Y+ Sbjct: 1 MGAAGSKLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQA---LYFCVPFRE---QLLEYYANNKSG--------------------------------------GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQAAKS------------------------------------------------------DPETSSSPEKIP----------------------------------------------------------------------------NGPKNGQANGVSKEPLVTWVHKNFQGILTNETRCLQCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLSRYKKLSYRVVFPLELKLSNTVE-----DSDIEY----SLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAV-QTFFGSSQEYSSNTDHGYILFYE 361 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig103.345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig103.345.1 >prot_L-elsbetiae_contig103.345.1 ID=prot_L-elsbetiae_contig103.345.1|Name=mRNA_L-elsbetiae_contig103.345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=548bp MGAHQTKLEREIGGIADGDGQERFFGLENFGNTCYCNSVLQARQALYFCEback to top mRNA from alignment at L-elsbetiae_contig103:20681..29709+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig103.345.1 ID=mRNA_L-elsbetiae_contig103.345.1|Name=mRNA_L-elsbetiae_contig103.345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9029bp|location=Sequence derived from alignment at L-elsbetiae_contig103:20681..29709+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig103:20681..29709+ >mRNA_L-elsbetiae_contig103.345.1 ID=mRNA_L-elsbetiae_contig103.345.1|Name=mRNA_L-elsbetiae_contig103.345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3288bp|location=Sequence derived from alignment at L-elsbetiae_contig103:20681..29709+ (Laminarionema elsbetiae ELsaHSoW15)back to top |