mRNA_L-elsbetiae_contig1474.3447.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 1.300e-17 Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 28 WYRCQKYELHNAAKRGSTERTLALL-SQGSVDIDQGTNRGLTPLMLAVTEGCARVVRVLLNKGANVAIAADDGRTALHGSAE-GGH 279 W R + +LH AA GS ER +ALL S+ S+ ID G G TPLMLA G +RVVR+LLNKGANV++ A+DG TALH S + GGH Sbjct: 11 WPRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGH 96
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Match: A0A6H5KEY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEY4_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 9.850e-17 Identity = 46/78 (58.97%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 49 ELHNAAKRGSTERTLALLSQGSVDIDQGTNRGLTPLMLAVTEGCARVVRVLLNKGANVAIAADDGRTALHGSAEGGHL 282 +LH A G E TLALLS GS+DIDQGT G TPLM A EGC RVVR+LL+ GA + AD G AL +A GGHL Sbjct: 75 QLHQAILGGLVELTLALLSSGSIDIDQGTPGGWTPLMYATNEGCVRVVRILLDNGAKTNLVADGGFDALSKAAIGGHL 152
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 3.470e-15 Identity = 48/85 (56.47%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 4 PPPPPRPEWYRCQKYELHNAAKRGSTERTLALLS-QGSVDIDQGTNRGLTPLMLAVTEGCARVVRVLLNKGANVAIAADDGRTAL 255 PPPPP W R ELH AA GS ER LALLS + +D++QG + G TPLMLA T G RVVR+LLN GAN++I D G AL Sbjct: 2 PPPPPTQGWPRGPMNELHLAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDAL 86
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 4.410e-15 Identity = 48/80 (60.00%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 49 ELHNAAKRGSTERTLALLSQGSVDIDQGTNR-GLTPLMLAVTEGCARVVRVLLNKGANVAIAADDGRTALHGSAEGGHLA 285 +L++AA GS ERT+A+LSQGSVDID G G TPLM A T G RVVRVLL GA V++A +DG TALH S HLA Sbjct: 7 KLYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLA 86
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 8.520e-15 Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 49 ELHNAAKRGSTERTLALLSQGSVDIDQGTNR-GLTPLMLAVTEGCARVVRVLLNKGANVAIAADDGRTALHGSAEGGHLA 285 +L++AA GS ERT+A+LSQGSV+ID G G TPLM A T G RVVRVLL GA V++A +DG TALH S HLA Sbjct: 7 KLYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLA 86
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Match: Q8QN90_ESV1K (EsV-1-199 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN90_ESV1K) HSP 1 Score: 77.8 bits (190), Expect = 4.930e-14 Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 52 LHNAAKRGSTERTLALLSQGSVDIDQGTNRGLTPLMLAVTEGCARVVRVLLNKGANVAIAADDGRTALHGSAEGGHL 282 LH+AA GS E+ ++S GSV I+QG+ G TPLMLA G +R+V LLNKGA I D+G TALH SA+ GH+ Sbjct: 16 LHSAANHGSFEQVFGIVSSGSVQINQGSPEGWTPLMLAADGGYSRIVSFLLNKGAIARIMGDEGVTALHVSAKNGHV 92
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 8.460e-14 Identity = 47/80 (58.75%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 49 ELHNAAKRGSTERTLALLSQGSVDIDQGTNR-GLTPLMLAVTEGCARVVRVLLNKGANVAIAADDGRTALHGSAEGGHLA 285 +L++A GS ERT+A+LSQGSVDID G G TPLM A T G RVVRVLL GA V++A +DG TALH S HLA Sbjct: 7 KLYHAPASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLA 86
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Match: D8LPL4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL4_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 4.450e-13 Identity = 40/77 (51.95%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 52 LHNAAKRGSTERTLALLSQGSVDIDQGTNRGLTPLMLAVTEGCARVVRVLLNKGANVAIAADDGRTALHGSAEGGHL 282 LH+AA GS E+ ++S GSV I+QG+ G TPLMLA G +R+V LL+KGA I D+G TALH SA GH+ Sbjct: 16 LHSAANDGSFEQVFGIVSSGSVQINQGSPEGWTPLMLAADGGYSRIVSFLLHKGAIAGIMGDEGVTALHVSARNGHV 92
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 2.160e-12 Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 1 Query: 52 LHNAAKRGSTERTLALLSQGSVDIDQGTNRGLTPLMLAVTEGCARVVRVLLNKGANVAIAADDGRTALH 258 LH+AA +GSTERT LL+ GS DI+QGT TPL+ A + G + V+ +LL+KGANV+I D G TALH Sbjct: 4 LHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALH 72
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 8.740e-12 Identity = 44/73 (60.27%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 70 RGSTERTLALLSQGSVDIDQGT-NRGLTPLMLAVTEGCARVVRVLLNKGANVAIAADDGRTALHGSAEGGHLA 285 RGS ERT+ALLS+GSVDID + G TPLM+A T G RV RVLL GA V++A +DG TALH S HLA Sbjct: 6 RGSVERTVALLSRGSVDIDGSYGDAGRTPLMVASTMGYLRVERVLLRLGAGVSVADNDGATALHLSVFNQHLA 78 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1474.3447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1474.3447.1 >prot_L-elsbetiae_contig1474.3447.1 ID=prot_L-elsbetiae_contig1474.3447.1|Name=mRNA_L-elsbetiae_contig1474.3447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp PPPPPPRPEWYRCQKYELHNAAKRGSTERTLALLSQGSVDIDQGTNRGLTback to top mRNA from alignment at L-elsbetiae_contig1474:15182..15610- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1474.3447.1 ID=mRNA_L-elsbetiae_contig1474.3447.1|Name=mRNA_L-elsbetiae_contig1474.3447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=429bp|location=Sequence derived from alignment at L-elsbetiae_contig1474:15182..15610- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1474:15182..15610- >mRNA_L-elsbetiae_contig1474.3447.1 ID=mRNA_L-elsbetiae_contig1474.3447.1|Name=mRNA_L-elsbetiae_contig1474.3447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=858bp|location=Sequence derived from alignment at L-elsbetiae_contig1474:15182..15610- (Laminarionema elsbetiae ELsaHSoW15)back to top |