prot_L-elsbetiae_contig14728.3437.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig14728.3437.1
Unique Name	prot_L-elsbetiae_contig14728.3437.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	138

Homology

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BLAST of mRNA_L-elsbetiae_contig14728.3437.1 vs. uniprot
Match: D8LIL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIL4_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 1.970e-78
Identity = 116/138 (84.06%), Postives = 123/138 (89.13%), Query Frame = 0

Query:    1 LAAKHAFDFSLNRSIVHGFATFYVTYSTIRVFVRFGQAIGVIAWESLDDFPDARKIVNHATSQWPMFIFVVFIPQCMMAVSLIGTPWLCKGVSVPESVGGVFDADDTAAELHQAFPFQLKWPSFLDAGGQDGLTDRLQ 138
            LAAKHAFDFSLNRSI HGFATFYVTYSTIRVFVRFGQAIGVIAWESLDDFPDARKIVNHATSQWPMFIF+VFIPQC+MA+SL+GTPWLCKGV+VPE VGGVF  D     + QAFPF LKW SFL+A  QDGL DRLQ
Sbjct:   95 LAAKHAFDFSLNRSIAHGFATFYVTYSTIRVFVRFGQAIGVIAWESLDDFPDARKIVNHATSQWPMFIFIVFIPQCLMALSLVGTPWLCKGVAVPERVGGVFHRDPG---ISQAFPFHLKWQSFLEAARQDGLADRLQ 229

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BLAST of mRNA_L-elsbetiae_contig14728.3437.1 vs. uniprot
Match: A0A835YVP4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP4_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 6.900e-16
Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = 0

Query:    1 LAAKHAFDFSLNRSIVHGFATFYVTYSTIRVFVRFGQAIGVIAWESLDDFPDA-RKIVNHATSQWP 65
            LAA+HA DFSL  S+V  FATFYV Y T RVF RFG  IG+IAWESLDDFP A R  + + TS++P
Sbjct:   26 LAARHALDFSLYVSLVRAFATFYVVYGTFRVFARFGSNIGLIAWESLDDFPHACRTPLLYLTSEYP 91

[Close]

BLAST of mRNA_L-elsbetiae_contig14728.3437.1 vs. uniprot
Match: A0A6H5KWB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWB8_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.180e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 0

Query:    1 LAAKHAFDFSLNRSIVHGFATFYVTYSTIR 30
            LAAKHAFDFSLNRSI HGFATFYVTYSTIR
Sbjct:   95 LAAKHAFDFSLNRSIAHGFATFYVTYSTIR 124

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig14728.3437.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig14728.3437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LIL4_ECTSI	1.970e-78	84.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835YVP4_9STRA	6.900e-16	63.64	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5KWB8_9PHAE	3.180e-9	96.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 64..88
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 89..138
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..63
None	No IPR available	TMHMM	TMhelix		coord: 15..33
None	No IPR available	TMHMM	TMhelix		coord: 66..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig14728	contig	L-elsbetiae_contig14728:344..2021 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig14728.3437.1	mRNA_L-elsbetiae_contig14728.3437.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig14728 342..2021 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig14728.3437.1 ID=prot_L-elsbetiae_contig14728.3437.1|Name=mRNA_L-elsbetiae_contig14728.3437.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp
LAAKHAFDFSLNRSIVHGFATFYVTYSTIRVFVRFGQAIGVIAWESLDDF
PDARKIVNHATSQWPMFIFVVFIPQCMMAVSLIGTPWLCKGVSVPESVGG
VFDADDTAAELHQAFPFQLKWPSFLDAGGQDGLTDRLQ