prot_L-elsbetiae_contig14725.3434.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14725.3434.1
Unique Nameprot_L-elsbetiae_contig14725.3434.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length60
Homology
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BLAST of mRNA_L-elsbetiae_contig14725.3434.1 vs. uniprot
Match: A0A6H5JH57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH57_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 2.740e-6
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 0 
Query:   20 HLSNLAVSADQRRQMEEDYRLALTMQRGGVAGAAGDRG 57
            HL N AV+AD+RRQMEEDYRLAL MQ+G  A A G  G
Sbjct:   28 HLRNFAVTADERRQMEEDYRLALAMQKGEAAAANGTGG 65
[Close]
BLAST of mRNA_L-elsbetiae_contig14725.3434.1 vs. uniprot
Match: D8LDG4_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG4_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 1.560e-5
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:   20 HLSNLAVSADQRRQMEEDYRLALTMQRGGVAGAAG 54
            HL N AV+AD+RRQMEEDYRLAL MQ+G  A A G
Sbjct:  378 HLRNFAVTADERRQMEEDYRLALAMQKGEAAVANG 412
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14725.3434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JH57_9PHAE2.740e-668.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDG4_ECTSI1.560e-571.43FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14725contigL-elsbetiae_contig14725:207..386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14725.3434.1mRNA_L-elsbetiae_contig14725.3434.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14725 132..652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14725.3434.1 ID=prot_L-elsbetiae_contig14725.3434.1|Name=mRNA_L-elsbetiae_contig14725.3434.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=60bp
MEMRGKEFTSPSSSRRRKYHLSNLAVSADQRRQMEEDYRLALTMQRGGVA
GAAGDRGEM*
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