mRNA_L-elsbetiae_contig14723.3432.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14723.3432.1
Unique NamemRNA_L-elsbetiae_contig14723.3432.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: D7G2T1_ECTSI (Putative transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T1_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 2.630e-118
Identity = 182/280 (65.00%), Postives = 230/280 (82.14%), Query Frame = 1
Query:   76 SFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLTWQNTVGLAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVTRPGNLLMFG 915
            SFVS IPTALRLGAGCGISV++S+LG+R++G+L+ +SF+L+  TWQ  VG  IITAAC K A P  + +KW+ ++  P V+T  +YAV DRSKF+GYSLA++ PLSNWG G+FG ++F   L   P ++WF++ R  +S+ IN+SSILL+LID+VCLE +R+KVKS+ EVDFSNAIGGT+KFR MAC IP MS VGN MGVTTQA FVQSMI+VFAGG++GLS+VVTG L +++TV+WPLLP+L P HVSGALTVVISLRFFTV++MIDV  P NLLMFG
Sbjct:   94 SFVSLIPTALRLGAGCGISVLVSVLGMRNIGVLVNNSFSLQAFTWQIIVGFGIITAACGKAA-PEKQLKKWMHVLGVPMVITVAIYAVLDRSKFQGYSLADHPPLSNWGMGAFGTINFSE-LRETPRKYWFYISRTFLSVNINVSSILLILIDAVCLEDVRTKVKSTREVDFSNAIGGTKKFRSMACAIPCMSLVGNFMGVTTQAAFVQSMILVFAGGKTGLSAVVTGALLLMTTVMWPLLPLLAPAHVSGALTVVISLRFFTVIKMIDVNEPRNLLMFG 371          
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: F7JQI4_9FIRM (Uncharacterized protein n=4 Tax=Lachnospiraceae TaxID=186803 RepID=F7JQI4_9FIRM)

HSP 1 Score: 65.1 bits (157), Expect = 3.880e-8
Identity = 83/316 (26.27%), Postives = 154/316 (48.73%), Query Frame = 1
Query:    7 EHLADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLT----WQNTVG-LAIITAACTKVAD-------PASKTRKWVLI-ILAPTV--LTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGG-FLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVTRPGNLL 906
            E L   FI+ +  +   A+ LR + +  IP A++L    GI + I+I+GL++ GL++++  TL  +     W++  G +A++  A   +          A   +  +L+ I+A T+  +  GV      +K   + +   A  +++ E SF  +DFGG F  + P   +F V+ LVIS +      L+ + DS+    +    K S  +D    I    K  LM+  I   +  G ++G +T    V+S   + AGGR+G++S+VT +LF+ S +  P++ + VPG  +    + + +     ++ +D +   N L
Sbjct:  116 EALVIVFISGIFFIVITAVGLREAIIRSIPDAVKLAITPGIGLFITIIGLKNAGLVVSNPSTLVSMVDFAQWRSEDGNMALVCGALVALVGLVVIGVLHAKNVKGSILLGIVAATIVGIPLGV------TKLSAFDMNIGAKFADFFEVSFMKMDFGGMFSGKNPVDTFFTVLMLVISFS------LVNMFDSI--GTLMGAAKQSGMIDKDGEIIH-MKEALMSDAIS--TAAGAMVGTSTVTTVVESSAGIAAGGRTGMTSLVTALLFLASIIFAPIVGI-VPGAATAPALIFVGILMLGNIKDVDFSDMTNAL 413          
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: A0A174TDY6_9FIRM (NCS2 family permease n=6 Tax=Anaerotruncus colihominis TaxID=169435 RepID=A0A174TDY6_9FIRM)

HSP 1 Score: 65.1 bits (157), Expect = 3.890e-8
Identity = 75/304 (24.67%), Postives = 142/304 (46.71%), Query Frame = 1
Query:    4 GEHLADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLT----W-----QNTVGLAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVT 888
            G+ LA  FI+ +  +   A+  R + V  IP  +R     GI + ++++GL++ GL++++S TL  L     W        V  A++      V       R    II+   V T     +G  S F G+S+      S++ + S   +DF G  A + N   F ++  ++ I I+ S     L+D    + + + + ++ + +  +  G   + R       L + VG  +G +T   FV+S   +  GGR+GL+S+VT +LF+ S ++ P++ + VPG  +    + + +     ++ +D T
Sbjct:  116 GQALAIVFISGILFIVITAIGFREACVRAIPPCVRGAISAGIGLFLALIGLKNAGLVVSNSSTLVALIDFSKWGDPELHGLVASALVALVGLVVIGALHARRIKGSIIIGILVATIVGVPLGVTS-FGGFSMNIGQQFSDFVDVSLFKMDFAGLFADSANV--FQMVFTLVMIVISFS-----LVDM--FDTIGTLLGTAKQANMLDQNGDMPRMRQAMMADALATTVGACLGSSTATTFVESSTGIAEGGRTGLTSLVTSLLFLASIIIAPIVGI-VPGAATAPALIFVGVLMMGSIKELDFT 408          
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: UPI001C0AB35F (NCS2 family permease n=3 Tax=Deinococcus TaxID=1298 RepID=UPI001C0AB35F)

HSP 1 Score: 62.8 bits (151), Expect = 2.220e-7
Identity = 72/285 (25.26%), Postives = 116/285 (40.70%), Query Frame = 1
Query:   70 RLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTL-------RPLTWQNTVGLAIITAACTKVADPASKTRKW-VLIILAPTVLT-AGVYAVGDRSKFKGYSLAENAPLSN-----WGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMID 882
            R + V  IPT+L+     GI   ++ LGLRS GL++++  TL        P  W   +GL I   A   ++   +    W +L   A  +LT A VYA G+    + +     A L       W     G +D  G L                   + + S++         +   +    S    F +  G   + R +     L +  G  MG +T   +V+S   +  GGR+GL++V  GVLF+LS  LWPL    +PG  +    +++       +R +D
Sbjct:  136 RQAIVQAIPTSLKFAITGGIGAFLAFLGLRSAGLVVSNDATLLGLGSLRAPTVWLALLGLLI---AAVLMSRRVTGAILWSILATTAVAILTGAAVYAGGENGALRAFPGFGGAFLGIFGTPVWPSSLVGQLDLAGALG------------------LGLLSVVFTFFFVDFFDATGTLTGLSQRAGFLDEHGNMPRARRLFAMDGLAAMFGAFMGTSTTTAYVESASGIGEGGRTGLTAVTVGVLFLLSMFLWPLAAA-IPGAATAPALILVGALMMEGVRQVD 398          
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: A0A498CZX8_9FIRM (NCS2 family permease n=2 Tax=Anaerotruncus TaxID=244127 RepID=A0A498CZX8_9FIRM)

HSP 1 Score: 62.8 bits (151), Expect = 2.240e-7
Identity = 73/288 (25.35%), Postives = 134/288 (46.53%), Query Frame = 1
Query:    4 GEHLADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLTWQNTVG--------LAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVV 843
            G+ LA  FI+ +  +   A+  R + V  IP  +R     GI + ++++GL++ GL++++S TL  L   + +G         + I A    V   A   R     I+   V+   V      + F G+SL      S++   S   +DFGG  A A N   F +I  ++ I I+ S     L+D    + + + + ++ +    +  G   + R    +  + + VG  +G +T   FV+S   +  GGR+GL+S+ T +LF+ S ++ P++ ++     + AL  V
Sbjct:  116 GQALAIVFISGILFILITAVGFREAVVKAIPHCVRGAISAGIGLFLALIGLKNAGLVVSNSSTLVALVDFSKMGDPELHGLICSAIVALIGLVVIGALHARNIKGSIIIGIVVATIVGIPLGVTSFHGFSLDVGRQFSDFVNVSLFKMDFGGLFAGATNI--FQMIFTLVMIVISFS-----LVDM--FDTIGTLLGTARQAKMLDDKGEMPRMREAMMSDAIATTVGACLGTSTATTFVESSTGIAEGGRTGLTSLTTSILFLASIIIAPIVGIIPSAATAPALVFV 394          
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: UPI000B2E91DF (NCS2 family permease n=1 Tax=Alkaliphilus transvaalensis TaxID=114628 RepID=UPI000B2E91DF)

HSP 1 Score: 61.2 bits (147), Expect = 6.880e-7
Identity = 74/294 (25.17%), Postives = 133/294 (45.24%), Query Frame = 1
Query:    7 EHLADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLTWQNTVG--LAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMID 882
            + LA  FI+ +  +      +R   V  IP +L+   G GI + I++LG ++ G+++++  TL  LT   + G  LA+I    T +   A K +  +L+ +  T L  G+      ++   +SL  +  L  W        DF G L    N      I  V+++ I+ S     L+D    + + + + + +     +  G             + +  G  +G +T   FV+S   V  GG++GL+SV TGVLF+LS  L P   ++VPG  +    +++ +     +R I+
Sbjct:  103 QALAAIFISGILFILLTVTGVREMIVEGIPNSLKHAIGGGIGLFIALLGFKNAGIIVSNPATLLALTDFKSAGPILAVIGITITGILM-AKKVKGAILVGIVATALL-GIPMGVTNTEVMAFSLDISPTLFKW--------DFAGLL-DIGNAGVVGAITSVLTVVISFS-----LVDM--FDTIGTLIGTGSRAGMLDEKGKLPNMNRALLADAVATSAGAALGTSTVTTFVESAAGVAEGGKTGLTSVTTGVLFILSVFLAPF-ALMVPGEATAPALIIVGVLMMGSVRQIN 377          
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: A0A6N7VW92_9FIRM (NCS2 family permease n=2 Tax=Anaerococcus TaxID=165779 RepID=A0A6N7VW92_9FIRM)

HSP 1 Score: 60.8 bits (146), Expect = 9.620e-7
Identity = 80/310 (25.81%), Postives = 146/310 (47.10%), Query Frame = 1
Query:   25 FIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPL----TWQNTVG---------LAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHW---FHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVTRPGNLL 906
            FI+ +  +   AL +R + +  IP +++L    GI + I+I+GL++ GL++ +  TL  L     W+   G         LA+I      +    +     ++ I++ T++   +      +K    SL     LS++ E SF  +DF G L + PN  W   F V  LV+S +      L+ + DS  L  + +  K S  VD +  +   ++  LM+  I   +  G L+G +T    V+S   + AGGR+GL+S+ T +LF+LS +  P++ + +P   +    + + +     ++ +D     N L
Sbjct:  122 FISGILFIVITALGIREAIIRAIPDSIKLAMTPGIGLFITIIGLKNAGLVVRNDATLVSLIDFANWRGADGNIEMILGAVLALIGLCIIAILTYKNVKGAILISIISSTIIGIPM----GLTKISNLSLNIGPKLSDFFEVSFFNLDFAG-LFQGPNL-WSSIFTVTMLVLSFS------LVNMFDS--LGTLLAAAKQSGLVDKNGEVINLKQ-ALMSDAIS--TAAGALVGTSTVTTVVESSAGIAAGGRTGLTSLTTALLFLLSIIFVPIISI-IPAQATAPALIFVGVLMLAGIKEVDFADVTNAL 413          
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: H1D609_9FUSO (Uncharacterized protein n=1 Tax=Fusobacterium necrophorum subsp. funduliforme 1_1_36S TaxID=742814 RepID=H1D609_9FUSO)

HSP 1 Score: 60.1 bits (144), Expect = 1.160e-6
Identity = 76/267 (28.46%), Postives = 127/267 (47.57%), Query Frame = 1
Query:   91 IPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLTWQNTVGLAIITAACTKVADPASKTRKWVLI-ILAPTVLTAGVYAVGDRSKFKGYSLAEN-APLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLV-LIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMID 882
            IP ++++  G GI + I+++GL+++GL++ +  TL  L       L  I      V     + +  +LI IL+ TVL    + V   S F   SL  + AP+       F  +D      ++  Q         +S+   I S + V L DS     + + +  S E+      G  + F  M  T    +  G +MG +T   FV+S   + AG R+GL+SVVT +LFVLS +  PL+ V VPG+ + +  +++ +  F  +R +D
Sbjct:   19 IPLSIKIAVGAGIGLFITLIGLKNMGLVVKNEATLVGLGVLGPEVLIGIAGLFIAVILEIKRVKGGILIGILSSTVLAFIFHKVEMPSSF--VSLPPSMAPI-------FMKLDI-----KSAFQ---------LSLMGPIFSFMFVDLFDS-----LGTLISCSKEIGLVEKDGKIKGFGKMLYTDVASTIFGAVMGTSTVTTFVESSAGIAAGARTGLASVVTAILFVLSLIFAPLVGV-VPGYATASALIIVGVYMFKNVRFLD 256          
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: A0A412G2H2_9FIRM (NCS2 family permease n=6 Tax=Holdemania TaxID=61170 RepID=A0A412G2H2_9FIRM)

HSP 1 Score: 60.5 bits (145), Expect = 1.220e-6
Identity = 76/283 (26.86%), Postives = 130/283 (45.94%), Query Frame = 1
Query:   13 LADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFT---LRPLTWQNTVGLAIITAACTKV--ADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITI-NISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVV 843
            LA  F++ +  +      LR   ++ IP  L+L  G GI   I+ +GL++ G+++A+  T   L  LT    V LAI   A T +  A   +    W LI  A   + AG+  V +  +     +  N  +   G          GF     ++ +  VI   + +   + +  L+ + +   L   + ++++  +   S+++G               +CVG ++G +T   FV+S   V  GGR+GL++V TGVLF+LS V +PLL V+     + AL VV
Sbjct:  101 LAAVFVSGIIFIVISVTGLRKMIINAIPQQLKLAIGAGIGFFIAFIGLKNAGIIVANESTFVALGKLT-DPVVLLAIFGLALTLILLAKKVTAAVFWGLIGTAVVGVIAGLCGVANMPQLPTAIMQFNFEMPTLG------AFMSGFGELFAHKDFIVVIFSFLFVDFFDTAGTLVAVANRAGLVNEKGELENIEKALLSDSVG---------------TCVGAVLGTSTVTSFVESTSGVEVGGRTGLTAVTTGVLFLLSIVFFPLLSVVTSAVTAPALIVV 361          
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: A0A5C7F3R1_9ACTN (NCS2 family permease n=1 Tax=Collinsella sp. BA40 TaxID=2560852 RepID=A0A5C7F3R1_9ACTN)

HSP 1 Score: 60.5 bits (145), Expect = 1.220e-6
Identity = 82/305 (26.89%), Postives = 136/305 (44.59%), Query Frame = 1
Query:   28 IANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLTWQNTVGLAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSL-------AENAPLSNWG--EGSFGIVDFGGFLA---RAPNQHWFHVIRLVISITINISSILLVLIDSVCL----EQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVTRP 894
            +  L  LA     LR + +  +P +LR     G+ + I++LGL + G+++ D  TL  +T+ +             V DP        L+ +   V+T  +Y      K KGY L           PL      EG   + DF  F A   +A +     ++++ ++ T      LLV + S+ L    + M + V    + DF +  G  +  R +     L + VG L+G ++   FV+S      GGR+GLSS+VTG++F+L+    PL+ ++      GAL V++      V+  ID T P
Sbjct:  105 LEGLVILALVLCGLREAIMDAVPVSLRHAIAVGLGIFIALLGLINGGIVVNDEATL--ITFGS-------------VYDPVF------LVGMISVVVTFMLYVF----KIKGYILWGIIIAAVVGIPLGVTALPEGIVSMPDFTTFGAPFQQAADGSGMAIVKVFVNPT------LLVFVFSIMLSDFFDTMGTAVAVGKQGDFLDEDGNVKDIRPILIVDSLAASVGGLLGASSCTTFVESSAGAADGGRTGLSSIVTGIIFLLAAFFSPLVGMIAAPATCGAL-VMVGFLMMNVVADIDFTNP 377          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2T1_ECTSI2.630e-11865.00Putative transporter n=1 Tax=Ectocarpus siliculosu... [more]
F7JQI4_9FIRM3.880e-826.27Uncharacterized protein n=4 Tax=Lachnospiraceae Ta... [more]
A0A174TDY6_9FIRM3.890e-824.67NCS2 family permease n=6 Tax=Anaerotruncus colihom... [more]
UPI001C0AB35F2.220e-725.26NCS2 family permease n=3 Tax=Deinococcus TaxID=129... [more]
A0A498CZX8_9FIRM2.240e-725.35NCS2 family permease n=2 Tax=Anaerotruncus TaxID=2... [more]
UPI000B2E91DF6.880e-725.17NCS2 family permease n=1 Tax=Alkaliphilus transvaa... [more]
A0A6N7VW92_9FIRM9.620e-725.81NCS2 family permease n=2 Tax=Anaerococcus TaxID=16... [more]
H1D609_9FUSO1.160e-628.46Uncharacterized protein n=1 Tax=Fusobacterium necr... [more]
A0A412G2H2_9FIRM1.220e-626.86NCS2 family permease n=6 Tax=Holdemania TaxID=6117... [more]
A0A5C7F3R1_9ACTN1.220e-626.89NCS2 family permease n=1 Tax=Collinsella sp. BA40 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14723contigL-elsbetiae_contig14723:6..3234 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score67.0
Seed ortholog evalue1.7e-08
Seed eggNOG ortholog1232443.BAIA02000106_gene3101
Preferred namexprA
KEGG koko:K06901
KEGG TC2.A.1.40
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Psort location CytoplasmicMembrane, score 10.00
EggNOG OGs1TQC6@1239,2483Q@186801,267NM@186813,COG2252@1,COG2252@2
COG Functional cat.S
Best tax levelunclassified Clostridiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons6
Model size915
Cds size915
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14723.3432.1prot_L-elsbetiae_contig14723.3432.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14723 6..3234 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815592.4519334-CDS-L-elsbetiae_contig14723:5..2211622815592.4519334-CDS-L-elsbetiae_contig14723:5..221Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 6..221 +
1691682978.767022-CDS-L-elsbetiae_contig14723:5..2211691682978.767022-CDS-L-elsbetiae_contig14723:5..221Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 6..221 +
1622815592.466257-CDS-L-elsbetiae_contig14723:1058..13911622815592.466257-CDS-L-elsbetiae_contig14723:1058..1391Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 1059..1391 +
1691682978.779414-CDS-L-elsbetiae_contig14723:1058..13911691682978.779414-CDS-L-elsbetiae_contig14723:1058..1391Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 1059..1391 +
1622815592.4824164-CDS-L-elsbetiae_contig14723:1614..16831622815592.4824164-CDS-L-elsbetiae_contig14723:1614..1683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 1615..1683 +
1691682978.788216-CDS-L-elsbetiae_contig14723:1614..16831691682978.788216-CDS-L-elsbetiae_contig14723:1614..1683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 1615..1683 +
1622815592.498235-CDS-L-elsbetiae_contig14723:2363..25021622815592.498235-CDS-L-elsbetiae_contig14723:2363..2502Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 2364..2502 +
1691682978.7989113-CDS-L-elsbetiae_contig14723:2363..25021691682978.7989113-CDS-L-elsbetiae_contig14723:2363..2502Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 2364..2502 +
1622815592.512209-CDS-L-elsbetiae_contig14723:2863..29601622815592.512209-CDS-L-elsbetiae_contig14723:2863..2960Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 2864..2960 +
1691682978.806694-CDS-L-elsbetiae_contig14723:2863..29601691682978.806694-CDS-L-elsbetiae_contig14723:2863..2960Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 2864..2960 +
1622815592.528123-CDS-L-elsbetiae_contig14723:3173..32341622815592.528123-CDS-L-elsbetiae_contig14723:3173..3234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 3174..3234 +
1691682978.815316-CDS-L-elsbetiae_contig14723:3173..32341691682978.815316-CDS-L-elsbetiae_contig14723:3173..3234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14723 3174..3234 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14723.3432.1

>prot_L-elsbetiae_contig14723.3432.1 ID=prot_L-elsbetiae_contig14723.3432.1|Name=mRNA_L-elsbetiae_contig14723.3432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp
MGEHLADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISIL
GLRSLGLLLADSFTLRPLTWQNTVGLAIITAACTKVADPASKTRKWVLII
LAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARA
PNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNA
IGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSV
VTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVTRPGN
LLMFG
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mRNA from alignment at L-elsbetiae_contig14723:6..3234+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14723.3432.1 ID=mRNA_L-elsbetiae_contig14723.3432.1|Name=mRNA_L-elsbetiae_contig14723.3432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3229bp|location=Sequence derived from alignment at L-elsbetiae_contig14723:6..3234+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGAGCACTTGGCCGACCAGTTCATCGCGAACCTGGCGGCGTTGGC GTTTTTCGCGCTCGCCCTCAGGCTGAGCTTCGTGTCGTACATTCCGACGG CCCTTCGCCTGGGAGCCGGGTGCGGGATATCCGTGATGATCAGCATCCTC GGCTTGCGCAGCCTGGGACTTCTGCTGGCAGACTCGTTCACCCTGCGACC CCTCACGTGGCAAAACGTGAGCGATCCTGCTCTAAATACGTAGTAAAAAC ACGAACGAACGCACGTTCAGTGAAATGCGTATTTCAGGTGTGCGGGGTGG GTGGCGAAAGGGCAACCGGTTTGCCCTTCTTTCCTCCAGACCCGATTTCA CACTTAGCCTATAGACTACAGAGTGAGCGGGCTACGAGCTTTGCGCCCCG TCGTGTCGTTCCCGTCGTGTGTGTGTGGTGGTGACAGTCCCGTTGACAGT CCCGTCGTACCCGTCGTCGCCGTCGTCAGTCACTTCTCGCACGCGCGTAG TAGGCTAGAGGAGTTCCTGTCTCGGTTTCTATTCCTTTGGACAAGGTTCC AAGGTAATGAATTACCTGTATCGCGCAATATATCGGGGACATATAAAAAA TAGTTTAACATCGGCCCTTGGCCTCCCCATGACTGCGAGGCAGTTCCGAG GACTTTTCGGGAAGGCCGCCCACGCAATCTTAGGCAAGCACCGAGGAAGG GTGGAGTGGGGGCCTCGGGGAAAGGAACACTTCTGCGTGGCCACGGTTCA GTACTCTCTGGCGAGATGCCCTCGAGGCAAGGAGGAGCCCATCGAGCACT GGATATAAATGTGAAGAAGAAAAAAACAAAAACGAAAAAACACCCACCCA CATGCATTGTGCCGCCTTTAATAATTTGACGAAACAAGCGAGCGCGGGGC AACTGCAAGAGCTGACACGGTCGCCACGCTTGCACCACCCCCACGTGTGT TTTTTTGCCTCTTGCCGCGCCGATGCTATATTTCGGAAATATCCGCTGGC ACTGGTCCTGCCCTGCCGAACGGAAAACGAAAAAAATGGTTCGGAGAGCC AAGACTGTGGGGCTTGCCATCATCACGGCCGCCTGCACCAAGGTTGCGGA CCCGGCCAGCAAAACGAGGAAGTGGGTACTCATCATCCTCGCGCCCACGG TCTTGACGGCGGGGGTGTACGCGGTGGGCGATCGCTCCAAGTTCAAAGGG TACTCTTTGGCCGAGAACGCGCCCTTGTCCAACTGGGGCGAAGGGAGCTT TGGCATCGTGGATTTTGGGGGGTTCTTGGCCAGGGCTCCGAATCAGCACT GGTTTCACGTGATCAGGCTGGTCATCAGCATCACGATCAATATCTCCAGC ATCTTGCTCGTCCTGATCGACTCGGTGTGCCTAGAGGTGGGACAGATATA GATATGTCGTCGACGGAAAGCAGAACAAACATAACATATCTACATAATAG CTGCAGAATGTCGTCTTCTTGAAGACTTGCAGTTGAGCCATGTTTCGAGA CTATGTTGTACTTACTGCACATGTCGTAGTGCATCCATCCGGGCATCATC CGGCGGCATACGTTTTCAACTAACCGTTGATCCTGCGATGTACCGTGATT GTGTTCCAGCAAATGCGCAGCAAGGTCAAATCTTCCGCAGAGGTCGACTT CTCAAACGCTATTGGAGGCACCCAGAAGGTGATGACTCCGTGAACGTGTC AAGTACGAAGGAACCTCTCCTTTGCCTCGTATTTGGGGGGGTGAAACTCG CGGGTGCAACCGGGCTGATTTTCACTTGCTAGCAATCTCCGAACATCAGA GAACATACATGCGGGCACCCTCGGCCGTATGTGTATCTGTATCTCCACTG CCCCACACAACTATTAATACGCTTGGCATCTTACTGCCTGTACTCGTGCG AGCGTGTGTCTATGGCCGCGGGTAGACTTCAGTACAAAGACCCGTCTCTT GTTAAGTTTCGGAAGTTGGAAATTCATCCTCACGTGTTGTGTATGGTAGA TATTTTCAGCAAAACGAAGTTCCATTGTCAAATACCGGGTACAGATGTAA AAAAATCCTCCTCTGGCGAACGGCGGTTTTAGTCCACGCCCTAAACGCCT CACCTCATTCTGGCCCTACCGCCAATGGAGGCGCGGGGGTTCCCTCTCTT ATTCCCCTCGCGCCCAATACGCGCAGCACGTGTGTTTGAAACGACGGGCA ATGCTGTAGCATCCTGCACGGATTGCTATGTAACTAAACCAAAAGGCCCA GATTGCGATTCCCGTGGAACGGCACAAACGGCGTTCTTGGTAGTATGTAG AGCGCTGAACTCTCCCTGTACCCCCTTATTGTCCGTCCCTTGTCACCCGT CCACGAAGTTCCGTTTGATGGCTTGCACCATACCGCTGATGTCTTGCGTC GGGAACCTTATGGGCGTCACCACCCAAGCCGTGTTCGTGCAGTCCATGAT CGTCGTCTTTGCAGGGGGTCGAAGCGGTCTGAGCTCGGTTGTTACCGGTG CGTCCACCCGCGGGAATAAGGACCGTGATGTCACTAATAATAACGTTGAT CTCTCCAAGTTGGTTGGTTTTTCCATGTGCTATTGTACAGATAGTACTGG CGAAACAAAAGCATGAATTTTTATGGTTGTAGATATGTATCTATGTATCG CATACGAAAGCTATCCCCCGGGAGGGGCACGTTTGGACGTTGTGTAGGCC ATAGATACTCCACACAATACGAGCGCTTTTGTTTTGTTGGTCAAGCCGCC AGAAGAGTAAGGGAACAGAGATTCATTCCGTCGTGCCGCCAACGGACCAA GCAGCCACAACCCACCGACCGTCATGTTCAACTCCGACGACCTGTCCTTG CAATCAAGGAGTCCTGTTCGTGCTTAGCACGGTGCTGTGGCCTCTTCTTC CTGTGCTCGTTCCGGGGCATGTTTCGGGAGCTCTGACGGTAGTCATCAGC TTAAGGTGCGTCTGTTTTACTCTGTTATTCTCACAGCCGCCGCCCCCGTG CTACATAACTTTGTTTGTGCCATGGAAGATTCTCGATTTCATTCGTGGCT CGGTAACACAGGGGTGATGCTCACGACACGAACCAAACTGTTTTTCAGCC CTCCTGGCATTCTGTGGATCCGTGTAATTTCTTTCTTCCGCGTTTTCTTC ACGAACGAAACGACGCAGGTTCTTCACCGTCATGCGGATGATCGATGTCA CACGCCCAGGAAATCTACTAATGTTTGGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14723:6..3234+

>mRNA_L-elsbetiae_contig14723.3432.1 ID=mRNA_L-elsbetiae_contig14723.3432.1|Name=mRNA_L-elsbetiae_contig14723.3432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1830bp|location=Sequence derived from alignment at L-elsbetiae_contig14723:6..3234+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGAGCACTTGGCCGACCAGTTCATCGCGAACCTGGCGGCGTTGGC
GTTTTTCGCGCTCGCCCTCAGGCTGAGCTTCGTGTCGTACATTCCGACGG
CCCTTCGCCTGGGAGCCGGGTGCGGGATATCCGTGATGATCAGCATCCTC
GGCTTGCGCAGCCTGGGACTTCTGCTGGCAGACTCGTTCACCCTGCGACC
CCTCACGTGGCAAAACATGGGCGAGCACTTGGCCGACCAGTTCATCGCGA
ACCTGGCGGCGTTGGCGTTTTTCGCGCTCGCCCTCAGGCTGAGCTTCGTG
TCGTACATTCCGACGGCCCTTCGCCTGGGAGCCGGGTGCGGGATATCCGT
GATGATCAGCATCCTCGGCTTGCGCAGCCTGGGACTTCTGCTGGCAGACT
CGTTCACCCTGCGACCCCTCACGTGGCAAAACACTGTGGGGCTTGCCATC
ATCACGGCCGCCTGCACCAAGGTTGCGGACCCGGCCAGCAAAACGAGGAA
GTGGGTACTCATCATCCTCGCGCCCACGGTCTTGACGGCGGGGGTGTACG
CGGTGGGCGATCGCTCCAAGTTCAAAGGGTACTCTTTGGCCGAGAACGCG
CCCTTGTCCAACTGGGGCGAAGGGAGCTTTGGCATCGTGGATTTTGGGGG
GTTCTTGGCCAGGGCTCCGAATCAGCACTGGTTTCACGTGATCAGGCTGG
TCATCAGCATCACGATCAATATCTCCAGCATCTTGCTCGTCCTGATCGAC
TCGGTGTGCCTAGAGACTGTGGGGCTTGCCATCATCACGGCCGCCTGCAC
CAAGGTTGCGGACCCGGCCAGCAAAACGAGGAAGTGGGTACTCATCATCC
TCGCGCCCACGGTCTTGACGGCGGGGGTGTACGCGGTGGGCGATCGCTCC
AAGTTCAAAGGGTACTCTTTGGCCGAGAACGCGCCCTTGTCCAACTGGGG
CGAAGGGAGCTTTGGCATCGTGGATTTTGGGGGGTTCTTGGCCAGGGCTC
CGAATCAGCACTGGTTTCACGTGATCAGGCTGGTCATCAGCATCACGATC
AATATCTCCAGCATCTTGCTCGTCCTGATCGACTCGGTGTGCCTAGAGCA
AATGCGCAGCAAGGTCAAATCTTCCGCAGAGGTCGACTTCTCAAACGCTA
TTGGAGGCACCCAGAAGCAAATGCGCAGCAAGGTCAAATCTTCCGCAGAG
GTCGACTTCTCAAACGCTATTGGAGGCACCCAGAAGTTCCGTTTGATGGC
TTGCACCATACCGCTGATGTCTTGCGTCGGGAACCTTATGGGCGTCACCA
CCCAAGCCGTGTTCGTGCAGTCCATGATCGTCGTCTTTGCAGGGGGTCGA
AGCGGTCTGAGCTCGGTTGTTACCGTTCCGTTTGATGGCTTGCACCATAC
CGCTGATGTCTTGCGTCGGGAACCTTATGGGCGTCACCACCCAAGCCGTG
TTCGTGCAGTCCATGATCGTCGTCTTTGCAGGGGGTCGAAGCGGTCTGAG
CTCGGTTGTTACCGGAGTCCTGTTCGTGCTTAGCACGGTGCTGTGGCCTC
TTCTTCCTGTGCTCGTTCCGGGGCATGTTTCGGGAGCTCTGACGGTAGTC
ATCAGCTTAAGGAGTCCTGTTCGTGCTTAGCACGGTGCTGTGGCCTCTTC
TTCCTGTGCTCGTTCCGGGGCATGTTTCGGGAGCTCTGACGGTAGTCATC
AGCTTAAGGTTCTTCACCGTCATGCGGATGATCGATGTCACACGCCCAGG
AAATCTACTAATGTTTGGTGTTCTTCACCGTCATGCGGATGATCGATGTC
ACACGCCCAGGAAATCTACTAATGTTTGGT
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